| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316675
Identifier: 74316675
GI number: 74316675
Start: 698299
End: 698619
Strand: Reverse
Name: 74316675
Synonym: Tbd_0657
Alternate gene names: NA
Gene position: 698619-698299 (Counterclockwise)
Preceding gene: 74316677
Following gene: 74316673
Centisome position: 24.01
GC content: 64.17
Gene sequence:
>321_bases ATGTCCCGGCAAAAGCTTCCCGAGCATTATCTGTTCGAGAAAAAAACCCACCAGGCCTTCATCAACGCAGTCGAGGATCT CGGCACGGCGCTCAGGCAACAGGGGCCGCTCGACGAAAAAACGGCGAACCTGATTCAGCTCGCCGCGGCCGTCGCGATCC GCTCCGAGGGCGCGGTGCACAGCCATATCAGGCGAGCGATGGAAAGCGGTGCGAGCGCCGACGAGGTCTACCACGCCATC GTCCTCCTCACCAGCACCGTCGGCTTTCCCACCGTGTCGGCCGCGTTGAGCTGGGCCGGTGACGTGACGCACGCGCCGTA G
Upstream 100 bases:
>100_bases AACACGAGCAGACAGTCGTCAGCGTAAAGGGGATCGATCGTCATCGCCCGCGGGCTTGCCTAAAGTGAATGTTTCCAGGC GCCAGATCCGGAGGAACCCC
Downstream 100 bases:
>100_bases CGCCGACCGGGAAAAGCGCTCAGCCCTTCAGGCCGTCCAGCAAGGCGAGCGCCCAAGCGACGCCGAAGCCGTTGGCGTCA CTCATGACGGCACCGAGCCC
Product: carboxymuconolactone decarboxylase domain-containing protein
Products: NA
Alternate protein names: Alkylhydroperoxidase
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSRQKLPEHYLFEKKTHQAFINAVEDLGTALRQQGPLDEKTANLIQLAAAVAIRSEGAVHSHIRRAMESGASADEVYHAI VLLTSTVGFPTVSAALSWAGDVTHAP
Sequences:
>Translated_106_residues MSRQKLPEHYLFEKKTHQAFINAVEDLGTALRQQGPLDEKTANLIQLAAAVAIRSEGAVHSHIRRAMESGASADEVYHAI VLLTSTVGFPTVSAALSWAGDVTHAP >Mature_105_residues SRQKLPEHYLFEKKTHQAFINAVEDLGTALRQQGPLDEKTANLIQLAAAVAIRSEGAVHSHIRRAMESGASADEVYHAIV LLTSTVGFPTVSAALSWAGDVTHAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11418; Mature: 11287
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQKLPEHYLFEKKTHQAFINAVEDLGTALRQQGPLDEKTANLIQLAAAVAIRSEGAVH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHH SHIRRAMESGASADEVYHAIVLLTSTVGFPTVSAALSWAGDVTHAP HHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure SRQKLPEHYLFEKKTHQAFINAVEDLGTALRQQGPLDEKTANLIQLAAAVAIRSEGAVH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHH SHIRRAMESGASADEVYHAIVLLTSTVGFPTVSAALSWAGDVTHAP HHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA