| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316570
Identifier: 74316570
GI number: 74316570
Start: 579518
End: 581194
Strand: Reverse
Name: 74316570
Synonym: Tbd_0552
Alternate gene names: NA
Gene position: 581194-579518 (Counterclockwise)
Preceding gene: 74316571
Following gene: 74316569
Centisome position: 19.97
GC content: 67.68
Gene sequence:
>1677_bases ATGAGCTCTTTGGCCACCAGATTTACCGCGCAGCTTTCCCGCCTGGTGCCCACCGGTAAGCGCGCCGACGACCCTCTGAA CGACCTCAAATCGGCGGCCCGCTGGCTCGACGGCCTGCCGGTCGGCGACGCCTTCAAGTGCCAGGACGCCGTCTGCCGCA CGCTCAAGCGCTCCAATGAAGACCCCGAGAGCTTCACGCGCGCACGCCTCGAGATATTCATGCTGCTCGACGAACGCTCG CGCGATCTGCAGGACACGCTCGTGCGCCAGTACCTGCGCAACCCTCGCATGTCGCGGCAGATGGAAAGCCAGCTCTGGCA CGCGATCTACGGGCTTTCCTGGGAACTCGCGCGCGGTTATCACAGCTTCGTGCTCCACCTTTCGCGCGACCCGGGCGGGC GCCACGCGGACGTGATCCCGCGCATCACCCTGCGCGCGGTGCGTGCGTTCGGCCAGCTGCTGAAGTGCCGGTCGATGCGT TACCTCGCGGCCGGCGAAAAGCTGTGGCTACGCCTGCACAATCTCTACCGCATCGCCGAGAGCGGGGGCTTTCAGCGCAG CGCGCAACGTGCCTATCCCGACGAGAATTCCGACTGCAGCTGCGAGACCGCGTACGTGCACATCCTGATGCTGAATCTCG CCAACTCGGGAACGCTCTACCCCCGGCAGATCAACATGCTCGACCGCTGGCTCTGCAACTGGCACGGCATGCTTCAGCTC GAAACGCACCTCGACCCCGATCGCCACACCTTCGTGATCGACCTCGCGGCCGACGAGGGGCCACGCCGGCTGCGCAAACC TGACCTCGCGAAACCCCTGCGTTTCTGGGAAACGGAGCGTCTGCTGCAGCGCGTGAACGAGATCTTCGGCGACCTGTTGC GCGGCGGCGCGCCGCGGCAGGCCGGCCTCGGCGACGCGCGTACCGCCGAAAGCCTCGAACTGCTCGACTACCTGCGCCAA CAGTGGGCTCCGCTCGCCAGGCGCGAGCAGCGGCGAGCGCCGCGCGAAGCGGTCAAGCGGCTGGTCGACGTCGCGCACGG ACTGAGCACCGTCGTCGCCCAGATCAAGCTCAGCAACGCGCCTGCGCGCGTGTCCCCGTACGGAACCGGGCTCGACTACA ACGAGGCCGACGACGTGCACGTCTACGGCTTCGTCACCGAGCGCACCCGCGACCGCGCGTCGATCCTGAAAAACCGTGCG GTCCCCTCCCCCGACGTCGAGCGCTGGGTGATCCACGACGAAAGCGAGTGCGGCCTGGGCGCGCGCGTCGAGTCGCGCGA CAAGGACTGGCTCCGCGTGGGCGCCCTGATCGGGGTTAGGCCGCACGACCGCGACGACTGGCAGCTCGGCGTCGTCCGCC GCCTGGCGCGCGAGGGCGACGAAACCAGCTCCGTCGGCATCGAAATCCTGCCGGGCAGGCCGGAATTGACCATGCTTGTC GACCTGTCGACACCCGCCTATACGGTCAAAGGCGTCGACGATGGCGCGGGCATGCTGCCGCACGCCTGCCTCCGGCTCGA CACGTCCCCGCCCAGCCTCGTCCTCGATCCGATCCTCTTCGCCCCGGGCAAGATGCTGGAAGTGCACGGTTCCGCCGAGC GAACACACCTCATCCTCGGCAATCCGATCGACCGCTCCGAAGGCTGGATGCGGGTCGGCATCGACCCCCTGGACTGA
Upstream 100 bases:
>100_bases GGCCTGGGTGCAAAGCCGGCTGAGCTGAACAAAGAGACTGGCACAAAGCTTGCTGGATAGACCGGTACCTTGATGTGGTC CCGACCGGATTTGCCTACCC
Downstream 100 bases:
>100_bases CACAGGCCGGCTTCCCGGCCGGCCGCGCCGCGGATGCCGGCGCCCACGTGCGCCGGTTTCACTTTGATTGCCTCTCTGGC ACAATCGTCGAAAGTCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 558; Mature: 557
Protein sequence:
>558_residues MSSLATRFTAQLSRLVPTGKRADDPLNDLKSAARWLDGLPVGDAFKCQDAVCRTLKRSNEDPESFTRARLEIFMLLDERS RDLQDTLVRQYLRNPRMSRQMESQLWHAIYGLSWELARGYHSFVLHLSRDPGGRHADVIPRITLRAVRAFGQLLKCRSMR YLAAGEKLWLRLHNLYRIAESGGFQRSAQRAYPDENSDCSCETAYVHILMLNLANSGTLYPRQINMLDRWLCNWHGMLQL ETHLDPDRHTFVIDLAADEGPRRLRKPDLAKPLRFWETERLLQRVNEIFGDLLRGGAPRQAGLGDARTAESLELLDYLRQ QWAPLARREQRRAPREAVKRLVDVAHGLSTVVAQIKLSNAPARVSPYGTGLDYNEADDVHVYGFVTERTRDRASILKNRA VPSPDVERWVIHDESECGLGARVESRDKDWLRVGALIGVRPHDRDDWQLGVVRRLAREGDETSSVGIEILPGRPELTMLV DLSTPAYTVKGVDDGAGMLPHACLRLDTSPPSLVLDPILFAPGKMLEVHGSAERTHLILGNPIDRSEGWMRVGIDPLD
Sequences:
>Translated_558_residues MSSLATRFTAQLSRLVPTGKRADDPLNDLKSAARWLDGLPVGDAFKCQDAVCRTLKRSNEDPESFTRARLEIFMLLDERS RDLQDTLVRQYLRNPRMSRQMESQLWHAIYGLSWELARGYHSFVLHLSRDPGGRHADVIPRITLRAVRAFGQLLKCRSMR YLAAGEKLWLRLHNLYRIAESGGFQRSAQRAYPDENSDCSCETAYVHILMLNLANSGTLYPRQINMLDRWLCNWHGMLQL ETHLDPDRHTFVIDLAADEGPRRLRKPDLAKPLRFWETERLLQRVNEIFGDLLRGGAPRQAGLGDARTAESLELLDYLRQ QWAPLARREQRRAPREAVKRLVDVAHGLSTVVAQIKLSNAPARVSPYGTGLDYNEADDVHVYGFVTERTRDRASILKNRA VPSPDVERWVIHDESECGLGARVESRDKDWLRVGALIGVRPHDRDDWQLGVVRRLAREGDETSSVGIEILPGRPELTMLV DLSTPAYTVKGVDDGAGMLPHACLRLDTSPPSLVLDPILFAPGKMLEVHGSAERTHLILGNPIDRSEGWMRVGIDPLD >Mature_557_residues SSLATRFTAQLSRLVPTGKRADDPLNDLKSAARWLDGLPVGDAFKCQDAVCRTLKRSNEDPESFTRARLEIFMLLDERSR DLQDTLVRQYLRNPRMSRQMESQLWHAIYGLSWELARGYHSFVLHLSRDPGGRHADVIPRITLRAVRAFGQLLKCRSMRY LAAGEKLWLRLHNLYRIAESGGFQRSAQRAYPDENSDCSCETAYVHILMLNLANSGTLYPRQINMLDRWLCNWHGMLQLE THLDPDRHTFVIDLAADEGPRRLRKPDLAKPLRFWETERLLQRVNEIFGDLLRGGAPRQAGLGDARTAESLELLDYLRQQ WAPLARREQRRAPREAVKRLVDVAHGLSTVVAQIKLSNAPARVSPYGTGLDYNEADDVHVYGFVTERTRDRASILKNRAV PSPDVERWVIHDESECGLGARVESRDKDWLRVGALIGVRPHDRDDWQLGVVRRLAREGDETSSVGIEILPGRPELTMLVD LSTPAYTVKGVDDGAGMLPHACLRLDTSPPSLVLDPILFAPGKMLEVHGSAERTHLILGNPIDRSEGWMRVGIDPLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63223; Mature: 63092
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLATRFTAQLSRLVPTGKRADDPLNDLKSAARWLDGLPVGDAFKCQDAVCRTLKRSNE CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC DPESFTRARLEIFMLLDERSRDLQDTLVRQYLRNPRMSRQMESQLWHAIYGLSWELARGY CHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCC HSFVLHLSRDPGGRHADVIPRITLRAVRAFGQLLKCRSMRYLAAGEKLWLRLHNLYRIAE EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SGGFQRSAQRAYPDENSDCSCETAYVHILMLNLANSGTLYPRQINMLDRWLCNWHGMLQL CCCCCHHHHHCCCCCCCCCCHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE ETHLDPDRHTFVIDLAADEGPRRLRKPDLAKPLRFWETERLLQRVNEIFGDLLRGGAPRQ EECCCCCCCEEEEEEECCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AGLGDARTAESLELLDYLRQQWAPLARREQRRAPREAVKRLVDVAHGLSTVVAQIKLSNA CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PARVSPYGTGLDYNEADDVHVYGFVTERTRDRASILKNRAVPSPDVERWVIHDESECGLG CCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC ARVESRDKDWLRVGALIGVRPHDRDDWQLGVVRRLAREGDETSSVGIEILPGRPELTMLV CCCCCCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEE DLSTPAYTVKGVDDGAGMLPHACLRLDTSPPSLVLDPILFAPGKMLEVHGSAERTHLILG EECCCCEEEECCCCCCCHHHHHHEEECCCCCCHHHHHHHHCCCCEEEECCCCCCEEEEEC NPIDRSEGWMRVGIDPLD CCCCCCCCEEEECCCCCC >Mature Secondary Structure SSLATRFTAQLSRLVPTGKRADDPLNDLKSAARWLDGLPVGDAFKCQDAVCRTLKRSNE CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC DPESFTRARLEIFMLLDERSRDLQDTLVRQYLRNPRMSRQMESQLWHAIYGLSWELARGY CHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCC HSFVLHLSRDPGGRHADVIPRITLRAVRAFGQLLKCRSMRYLAAGEKLWLRLHNLYRIAE EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SGGFQRSAQRAYPDENSDCSCETAYVHILMLNLANSGTLYPRQINMLDRWLCNWHGMLQL CCCCCHHHHHCCCCCCCCCCHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE ETHLDPDRHTFVIDLAADEGPRRLRKPDLAKPLRFWETERLLQRVNEIFGDLLRGGAPRQ EECCCCCCCEEEEEEECCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AGLGDARTAESLELLDYLRQQWAPLARREQRRAPREAVKRLVDVAHGLSTVVAQIKLSNA CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PARVSPYGTGLDYNEADDVHVYGFVTERTRDRASILKNRAVPSPDVERWVIHDESECGLG CCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC ARVESRDKDWLRVGALIGVRPHDRDDWQLGVVRRLAREGDETSSVGIEILPGRPELTMLV CCCCCCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEE DLSTPAYTVKGVDDGAGMLPHACLRLDTSPPSLVLDPILFAPGKMLEVHGSAERTHLILG EECCCCEEEECCCCCCCHHHHHHEEECCCCCCHHHHHHHHCCCCEEEECCCCCCEEEEEC NPIDRSEGWMRVGIDPLD CCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA