| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is kefB [H]
Identifier: 74316557
GI number: 74316557
Start: 562894
End: 564870
Strand: Direct
Name: kefB [H]
Synonym: Tbd_0539
Alternate gene names: 74316557
Gene position: 562894-564870 (Clockwise)
Preceding gene: 74316540
Following gene: 74316559
Centisome position: 19.34
GC content: 67.37
Gene sequence:
>1977_bases ATGCACTCCGGTAGCAGCCTTCAGCTCGTCCTGATCCTGCTCGCGGTGGCGGTGCTGGTGGCGGCCGCGGCGCGTGCGCT GCGCCTGCCGACCATGCTCGCCTATCTCGTCACCGGGATCGCGATCGGCCCGTTCGCGCTCGGCTGGATTCCGGACAGCG ACGAGGCGCGTTATCTGGCCGAATTCGGCGTCGTGTTCCTGATGTTTTCGATCGGCCTCGAATTCAGCCTGCCGCGTCTG ATGACAATGCGCATGACCGTGTTCGGCTTCGGCGGCGCACAGGTCGTGCTGACCATTGTCCTCAGCGCCGCGGTCGCCTG GATGCTCGGATTGCCCCCGCTCGCCGCGCTCGCCGTCGGCGGCATCATGTCGATGTCGTCGACCGCGATCGTCTCGAAAA TGCTGACCGAACGGCTCGAGGTGCAGACCTCGCACGGACGCCAGATCTTCGGGGCGCTGCTGTTTCAGGATCTCGCAGTG GTGCCGCTGCTGATCCTGATCCCGGCTTTTGCCAAGGAATCGGACGCGATGGCCGCGACCCTCGGTCTGGCCTTGCTCAA GGCGACGGTCGTCCTCGGCTTCCTACTGTTCGTCGGTCAGCGCGTCATGCGGCCGTGGTTCCAGTGGGTCGCGGGGCACA AGTCGCCCGAGCTTTTCACCCTCAATTTGCTGCTTTTCACGCTCGGCCTCGCCTTCCTGACCGAGAGCGCCGGCCTGTCG CTGGCGCTCGGGGCCTTCCTCGCTGGCATGCTGGTGTCCGAGACCGAATACCGCTACCAAGTCGAGGACGACATCAAGCC TTTCCGGGACGTGCTCCTGGGCCTGTTCTTCGTCACGATCGGCATGCGTCTCGACCCCACGCAGGTGATGCTCGACTGGG CCGACGTGCTCATGATCGTCGCGGCGATCGTCATCGGCAAGGGCGTGCTCGTCGCGGGTCTCGCAATGGCCTTCGGCAGT GGCCGGCCGACCGCGTGGCGCACCGCTCTTGGGCTCGCGCAGGCGGGCGAATTCGGCTTCGTTCTGCTCGCGCAGGCGGC CGACCTCAGGCTGCTCGGCGTCGAGGTCGCCCAGCCGCTGCTCGCCGCGATGGTGCTGTCGATGCTGATCGCTCCGCTGC TGATCCACCGGATGGACACCCTCACGCGGCTTCTTGCCGGCAGCGAGTGGTCCGGGCGCGCCAAGGAAGTGCACGACATT TCGATCAAGAGCTTCGGCAAGACCCGCCACGTGATCGTCTGCGGCTACGGGCGCAGCGGCCAGAATCTGGCGCGCCTGCT CGAGGCCGAAGGCATCACCTTTATCGCACTCGACGCCGACCCCGAGCGCATCCGCGCGGTCGCAGCGTCAGGCGTTTCGG CCGTCTACGGCGATGCGAGCCGGCGTGAAGTGCTGGTCGCCGCGGGCTTGAGCCGGGCGCAGGCCGTCGTTGTCACCTAT TCCGACGTGCATTCGAGCATGGCCATCCTGCGTCATGTGCGCGAGCTGCGACCGGAGGTCCCGGTCATCGTGCGCACGAT CGACGACACCCATATCGACGCCTTGAAGGCGGCCGGCGCGGCCGAAGTCGTGTCGGAAGTGATGGAAGGCTCGCTGATGC TCGCCTCGCACGCGCTGATGCTGCTCGGCGTGCCGCTCGCCCAGGTGCTGAGGCGGGTGCGTGACGTCCGCGACACGCGT TACGCGCTGATGCGCGGGTTTTTCCGTGGCGCGAGCGACGTCGACCACGAACTCGACCAGCAGAGCCAGCCGCGCCTGAA CACCGTGCTGATCACCCAGGGCTCGGCCGCGGCGGGGCACACGCTCGCGGAACTGGCCTTGGACGAATTGGCGGTCGAGG TGGTCGCGATCCGCCGTCAGGGCATCAAGGGCGTCGACCCGCAGCCCGAGGCCGAAATCCGCGTGGGCGACGTGCTGGTG TTACGGGGCGGCGCCGGGGGGCTGGCGGCGGCGGAGTTCAGGTTATTGCAGGGCTGA
Upstream 100 bases:
>100_bases AGCGTATCGCGCCCCCCCGAATAACACTCAGCCATCGACGACCGCATGCCCTTCACGAGGACGCCGACTTCAGCACCCAC CCGCGCCACCGACACTTCGC
Downstream 100 bases:
>100_bases AGCGTTCTCCGAGCGCTAGTCCGGTCGGGACGCCCTCAGCGACGGACCGAAAAGAAACGCGGGACTTATACGCCCATGCA AACGGTGTACGTGGTGGAAT
Product: antiporter-2, CPA2 family monovalent cation/proton antiporter
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter; NEM-activatable K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 658; Mature: 658
Protein sequence:
>658_residues MHSGSSLQLVLILLAVAVLVAAAARALRLPTMLAYLVTGIAIGPFALGWIPDSDEARYLAEFGVVFLMFSIGLEFSLPRL MTMRMTVFGFGGAQVVLTIVLSAAVAWMLGLPPLAALAVGGIMSMSSTAIVSKMLTERLEVQTSHGRQIFGALLFQDLAV VPLLILIPAFAKESDAMAATLGLALLKATVVLGFLLFVGQRVMRPWFQWVAGHKSPELFTLNLLLFTLGLAFLTESAGLS LALGAFLAGMLVSETEYRYQVEDDIKPFRDVLLGLFFVTIGMRLDPTQVMLDWADVLMIVAAIVIGKGVLVAGLAMAFGS GRPTAWRTALGLAQAGEFGFVLLAQAADLRLLGVEVAQPLLAAMVLSMLIAPLLIHRMDTLTRLLAGSEWSGRAKEVHDI SIKSFGKTRHVIVCGYGRSGQNLARLLEAEGITFIALDADPERIRAVAASGVSAVYGDASRREVLVAAGLSRAQAVVVTY SDVHSSMAILRHVRELRPEVPVIVRTIDDTHIDALKAAGAAEVVSEVMEGSLMLASHALMLLGVPLAQVLRRVRDVRDTR YALMRGFFRGASDVDHELDQQSQPRLNTVLITQGSAAAGHTLAELALDELAVEVVAIRRQGIKGVDPQPEAEIRVGDVLV LRGGAGGLAAAEFRLLQG
Sequences:
>Translated_658_residues MHSGSSLQLVLILLAVAVLVAAAARALRLPTMLAYLVTGIAIGPFALGWIPDSDEARYLAEFGVVFLMFSIGLEFSLPRL MTMRMTVFGFGGAQVVLTIVLSAAVAWMLGLPPLAALAVGGIMSMSSTAIVSKMLTERLEVQTSHGRQIFGALLFQDLAV VPLLILIPAFAKESDAMAATLGLALLKATVVLGFLLFVGQRVMRPWFQWVAGHKSPELFTLNLLLFTLGLAFLTESAGLS LALGAFLAGMLVSETEYRYQVEDDIKPFRDVLLGLFFVTIGMRLDPTQVMLDWADVLMIVAAIVIGKGVLVAGLAMAFGS GRPTAWRTALGLAQAGEFGFVLLAQAADLRLLGVEVAQPLLAAMVLSMLIAPLLIHRMDTLTRLLAGSEWSGRAKEVHDI SIKSFGKTRHVIVCGYGRSGQNLARLLEAEGITFIALDADPERIRAVAASGVSAVYGDASRREVLVAAGLSRAQAVVVTY SDVHSSMAILRHVRELRPEVPVIVRTIDDTHIDALKAAGAAEVVSEVMEGSLMLASHALMLLGVPLAQVLRRVRDVRDTR YALMRGFFRGASDVDHELDQQSQPRLNTVLITQGSAAAGHTLAELALDELAVEVVAIRRQGIKGVDPQPEAEIRVGDVLV LRGGAGGLAAAEFRLLQG >Mature_658_residues MHSGSSLQLVLILLAVAVLVAAAARALRLPTMLAYLVTGIAIGPFALGWIPDSDEARYLAEFGVVFLMFSIGLEFSLPRL MTMRMTVFGFGGAQVVLTIVLSAAVAWMLGLPPLAALAVGGIMSMSSTAIVSKMLTERLEVQTSHGRQIFGALLFQDLAV VPLLILIPAFAKESDAMAATLGLALLKATVVLGFLLFVGQRVMRPWFQWVAGHKSPELFTLNLLLFTLGLAFLTESAGLS LALGAFLAGMLVSETEYRYQVEDDIKPFRDVLLGLFFVTIGMRLDPTQVMLDWADVLMIVAAIVIGKGVLVAGLAMAFGS GRPTAWRTALGLAQAGEFGFVLLAQAADLRLLGVEVAQPLLAAMVLSMLIAPLLIHRMDTLTRLLAGSEWSGRAKEVHDI SIKSFGKTRHVIVCGYGRSGQNLARLLEAEGITFIALDADPERIRAVAASGVSAVYGDASRREVLVAAGLSRAQAVVVTY SDVHSSMAILRHVRELRPEVPVIVRTIDDTHIDALKAAGAAEVVSEVMEGSLMLASHALMLLGVPLAQVLRRVRDVRDTR YALMRGFFRGASDVDHELDQQSQPRLNTVLITQGSAAAGHTLAELALDELAVEVVAIRRQGIKGVDPQPEAEIRVGDVLV LRGGAGGLAAAEFRLLQG
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=376, Percent_Identity=27.3936170212766, Blast_Score=113, Evalue=7e-25, Organism=Escherichia coli, GI1786232, Length=554, Percent_Identity=34.6570397111913, Blast_Score=269, Evalue=3e-73, Organism=Escherichia coli, GI1789749, Length=544, Percent_Identity=34.9264705882353, Blast_Score=253, Evalue=3e-68, Organism=Escherichia coli, GI1786685, Length=534, Percent_Identity=30.8988764044944, Blast_Score=211, Evalue=2e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR020884 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 70304; Mature: 70304
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSGSSLQLVLILLAVAVLVAAAARALRLPTMLAYLVTGIAIGPFALGWIPDSDEARYLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHH EFGVVFLMFSIGLEFSLPRLMTMRMTVFGFGGAQVVLTIVLSAAVAWMLGLPPLAALAVG HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH GIMSMSSTAIVSKMLTERLEVQTSHGRQIFGALLFQDLAVVPLLILIPAFAKESDAMAAT HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LGLALLKATVVLGFLLFVGQRVMRPWFQWVAGHKSPELFTLNLLLFTLGLAFLTESAGLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCHH LALGAFLAGMLVSETEYRYQVEDDIKPFRDVLLGLFFVTIGMRLDPTQVMLDWADVLMIV HHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AAIVIGKGVLVAGLAMAFGSGRPTAWRTALGLAQAGEFGFVLLAQAADLRLLGVEVAQPL HHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEHHHHHHHH LAAMVLSMLIAPLLIHRMDTLTRLLAGSEWSGRAKEVHDISIKSFGKTRHVIVCGYGRSG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHCCCCEEEEEEECCCCC QNLARLLEAEGITFIALDADPERIRAVAASGVSAVYGDASRREVLVAAGLSRAQAVVVTY HHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCHHHHCCCCHHHEEEEECCCCCEEEEEEH SDVHSSMAILRHVRELRPEVPVIVRTIDDTHIDALKAAGAAEVVSEVMEGSLMLASHALM HHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHH LLGVPLAQVLRRVRDVRDTRYALMRGFFRGASDVDHELDQQSQPRLNTVLITQGSAAAGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCH TLAELALDELAVEVVAIRRQGIKGVDPQPEAEIRVGDVLVLRGGAGGLAAAEFRLLQG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCEEEEECCCCCHHHHHHHHCCC >Mature Secondary Structure MHSGSSLQLVLILLAVAVLVAAAARALRLPTMLAYLVTGIAIGPFALGWIPDSDEARYLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHH EFGVVFLMFSIGLEFSLPRLMTMRMTVFGFGGAQVVLTIVLSAAVAWMLGLPPLAALAVG HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH GIMSMSSTAIVSKMLTERLEVQTSHGRQIFGALLFQDLAVVPLLILIPAFAKESDAMAAT HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LGLALLKATVVLGFLLFVGQRVMRPWFQWVAGHKSPELFTLNLLLFTLGLAFLTESAGLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCHH LALGAFLAGMLVSETEYRYQVEDDIKPFRDVLLGLFFVTIGMRLDPTQVMLDWADVLMIV HHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AAIVIGKGVLVAGLAMAFGSGRPTAWRTALGLAQAGEFGFVLLAQAADLRLLGVEVAQPL HHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEHHHHHHHH LAAMVLSMLIAPLLIHRMDTLTRLLAGSEWSGRAKEVHDISIKSFGKTRHVIVCGYGRSG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHCCCCEEEEEEECCCCC QNLARLLEAEGITFIALDADPERIRAVAASGVSAVYGDASRREVLVAAGLSRAQAVVVTY HHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCHHHHCCCCHHHEEEEECCCCCEEEEEEH SDVHSSMAILRHVRELRPEVPVIVRTIDDTHIDALKAAGAAEVVSEVMEGSLMLASHALM HHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHH LLGVPLAQVLRRVRDVRDTRYALMRGFFRGASDVDHELDQQSQPRLNTVLITQGSAAAGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCH TLAELALDELAVEVVAIRRQGIKGVDPQPEAEIRVGDVLVLRGGAGGLAAAEFRLLQG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCEEEEECCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA