Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316559

Identifier: 74316559

GI number: 74316559

Start: 565804

End: 567591

Strand: Direct

Name: 74316559

Synonym: Tbd_0541

Alternate gene names: NA

Gene position: 565804-567591 (Clockwise)

Preceding gene: 74316557

Following gene: 74316587

Centisome position: 19.44

GC content: 69.18

Gene sequence:

>1788_bases
ATGCTCCGTTCCGACTTCCCGGTCCAGCCTTCCTCGTCGATGCACGAACCTACCCCAAACGCCCCGCCCATGCCCTGGCT
CAGTACGCTGGCTGTCCGTTTGACGCGCGTCGCCCCAGGTCGCTGGCTTGCGCTGATGCTGCTCGCCCTGCACGCGGCCG
TCGCGTTCGATGCCGAAGCGGCTATAAGCCGCGGATTCCTGCTCGCGCATTACGGGCTGTTCCTGCTCTGGCAGCCGCTG
GTGAGGAGCGAGGCCCGCATCGAGCCGCGGCTCGCGCTGCCTGTGTTTGCGATGGCCGCCCTGCTCGTGCTGGTCGACAG
CCCTTGGGTCCTCGCGCTGTGGCTGGCGGTGCTCGCCGGGCTGGTCGGTGCCGTCGCGGCCTCGCACGACGGGCGTCGGC
AGCACCTGCCTTATCTACTCGCGCTCGCGTACCTGCTCGCCTTGCTGCTCGCCTGGGTGTTGCCGCAAAGCCTCGGCGAC
ACGGCCTTGCCCGACGAACTCCAATTTGCCGTGCGCTACGGGCTGCCGCTGCTGCCGCTTGCCATTCTGTTCCTGCCGGG
TGAACGCCAGCGCGGTGCCTCGTCGACGCTCGACTTCATCTACGGGCTCATGCTGTCGCTGCTCGTGATCGTGATGGCGC
TCGGCGTGTTCGCGGTCGTCGCGGTCGCGAAGGTGGGCTACGCGTGGGCGCTCGTGCAGACGCTGCTCGGTATGGCGGCG
CTGCTGCTTGCGCTGTCGTGGCTGTGGAACCCGCGCGCCGGCTTTACCGGCCTCGGCCAGCTGACGTCGCGCTACCTGCT
CTCGGTCGGGCTGCCGTTCGAGGGCTGGGCCCGGCGGCTGGCGACGCTCGCCGAACGCGAACGCGATCCCGAGTCCTTCG
TGCGCGATGCACTCGCCGACCTGCACGAACTGACCTGGATCAGCGGCGGCCGGTGGCAGGCGGCGCGCGGCGAAGGCCAC
TTCGGGGACCAGGCGCCGCACCGGGTCGAGCACGCCTTCCACGGCCTCGCGCTCGCCTGGTATGCGCCGCGCCCGCTGAC
GCCTTCGCTCGCGCTGCACGTGCGCCTGCTGTCGCAGTTGCTCGGCTATTTCTATGCCGCCAAGGTGCGTGAGCAGACCT
TGCGCGAGCAGGCCTACAGCCAGGCGATTCACGATACCGGCGCGCGGCTCACCCATGACGTCAAGAACATCCTGCAGTCG
GTAAAGACGCTGCTCGCCGCGGTCGATACCGCGACCCCGGAGGACAGCGACCGCCTCCTGGCCTTGATGAAGCGCCAGGT
GCCACAGCTCGTCGCGCGCCTGTCGCAGACCGTCGACAAGCTCAAGCAGCCGACGGAAATGGATGCGGCGCACGTGCCGG
CACAGGCTTGGTGGGCTGCGCTGCGGGCGCGCTACGAGCACGACGATGTGGGGTTCTCCGCCGACGCGCTCGACGAAACG
CCCTTGCCGCAGGACCTGTTCGACAGCGTGGCCGACAATCTGCTCGCCAACGCGCTGCGCAAACGCCGCGGCGGCGTGGG
TGTAGCCGTGGAGGTGCGCCTCAGTTTGCGGCCGACGGTCGCCTTGACCGTGACCGACACCGGCGCGCCCGCCCCCGAGC
ATGTCGCGCGTAATCTGTTCCTGAGTCCGGTGGCGTCGGATTTCGGGCTTGGCGTCGGGCTTTATCAGGCGGCGCGCCAG
GCGGCACGTTCGGGCTTTCGCCTCGATCTGCCGGCCAATCAGGCGGGCCAGGTGACGCTCCGAATTCAGGCTACGGACAG
CCGCCACCCGGACATATCCGCCCCCTGA

Upstream 100 bases:

>100_bases
TCGGTGCATGGGCGGTGATGTCGAAAACACGACGTGTGCGGCGAACTGCCGTCACCGACCCCGATGCTCGATTTAAGGCA
GGAAATGCCGTTAGCATGGC

Downstream 100 bases:

>100_bases
GTTGATCGGCGGAAATCCAGGTCACGAGGTCGTCGAAGTCGTCTGAAGGCGTGCGGCTGACAAATTCTTGGTCGACGTGG
TCGCTGTTGGTGTTTTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 595; Mature: 595

Protein sequence:

>595_residues
MLRSDFPVQPSSSMHEPTPNAPPMPWLSTLAVRLTRVAPGRWLALMLLALHAAVAFDAEAAISRGFLLAHYGLFLLWQPL
VRSEARIEPRLALPVFAMAALLVLVDSPWVLALWLAVLAGLVGAVAASHDGRRQHLPYLLALAYLLALLLAWVLPQSLGD
TALPDELQFAVRYGLPLLPLAILFLPGERQRGASSTLDFIYGLMLSLLVIVMALGVFAVVAVAKVGYAWALVQTLLGMAA
LLLALSWLWNPRAGFTGLGQLTSRYLLSVGLPFEGWARRLATLAERERDPESFVRDALADLHELTWISGGRWQAARGEGH
FGDQAPHRVEHAFHGLALAWYAPRPLTPSLALHVRLLSQLLGYFYAAKVREQTLREQAYSQAIHDTGARLTHDVKNILQS
VKTLLAAVDTATPEDSDRLLALMKRQVPQLVARLSQTVDKLKQPTEMDAAHVPAQAWWAALRARYEHDDVGFSADALDET
PLPQDLFDSVADNLLANALRKRRGGVGVAVEVRLSLRPTVALTVTDTGAPAPEHVARNLFLSPVASDFGLGVGLYQAARQ
AARSGFRLDLPANQAGQVTLRIQATDSRHPDISAP

Sequences:

>Translated_595_residues
MLRSDFPVQPSSSMHEPTPNAPPMPWLSTLAVRLTRVAPGRWLALMLLALHAAVAFDAEAAISRGFLLAHYGLFLLWQPL
VRSEARIEPRLALPVFAMAALLVLVDSPWVLALWLAVLAGLVGAVAASHDGRRQHLPYLLALAYLLALLLAWVLPQSLGD
TALPDELQFAVRYGLPLLPLAILFLPGERQRGASSTLDFIYGLMLSLLVIVMALGVFAVVAVAKVGYAWALVQTLLGMAA
LLLALSWLWNPRAGFTGLGQLTSRYLLSVGLPFEGWARRLATLAERERDPESFVRDALADLHELTWISGGRWQAARGEGH
FGDQAPHRVEHAFHGLALAWYAPRPLTPSLALHVRLLSQLLGYFYAAKVREQTLREQAYSQAIHDTGARLTHDVKNILQS
VKTLLAAVDTATPEDSDRLLALMKRQVPQLVARLSQTVDKLKQPTEMDAAHVPAQAWWAALRARYEHDDVGFSADALDET
PLPQDLFDSVADNLLANALRKRRGGVGVAVEVRLSLRPTVALTVTDTGAPAPEHVARNLFLSPVASDFGLGVGLYQAARQ
AARSGFRLDLPANQAGQVTLRIQATDSRHPDISAP
>Mature_595_residues
MLRSDFPVQPSSSMHEPTPNAPPMPWLSTLAVRLTRVAPGRWLALMLLALHAAVAFDAEAAISRGFLLAHYGLFLLWQPL
VRSEARIEPRLALPVFAMAALLVLVDSPWVLALWLAVLAGLVGAVAASHDGRRQHLPYLLALAYLLALLLAWVLPQSLGD
TALPDELQFAVRYGLPLLPLAILFLPGERQRGASSTLDFIYGLMLSLLVIVMALGVFAVVAVAKVGYAWALVQTLLGMAA
LLLALSWLWNPRAGFTGLGQLTSRYLLSVGLPFEGWARRLATLAERERDPESFVRDALADLHELTWISGGRWQAARGEGH
FGDQAPHRVEHAFHGLALAWYAPRPLTPSLALHVRLLSQLLGYFYAAKVREQTLREQAYSQAIHDTGARLTHDVKNILQS
VKTLLAAVDTATPEDSDRLLALMKRQVPQLVARLSQTVDKLKQPTEMDAAHVPAQAWWAALRARYEHDDVGFSADALDET
PLPQDLFDSVADNLLANALRKRRGGVGVAVEVRLSLRPTVALTVTDTGAPAPEHVARNLFLSPVASDFGLGVGLYQAARQ
AARSGFRLDLPANQAGQVTLRIQATDSRHPDISAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64899; Mature: 64899

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSDFPVQPSSSMHEPTPNAPPMPWLSTLAVRLTRVAPGRWLALMLLALHAAVAFDAEA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHH
AISRGFLLAHYGLFLLWQPLVRSEARIEPRLALPVFAMAALLVLVDSPWVLALWLAVLAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LVGAVAASHDGRRQHLPYLLALAYLLALLLAWVLPQSLGDTALPDELQFAVRYGLPLLPL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHH
AILFLPGERQRGASSTLDFIYGLMLSLLVIVMALGVFAVVAVAKVGYAWALVQTLLGMAA
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLALSWLWNPRAGFTGLGQLTSRYLLSVGLPFEGWARRLATLAERERDPESFVRDALAD
HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LHELTWISGGRWQAARGEGHFGDQAPHRVEHAFHGLALAWYAPRPLTPSLALHVRLLSQL
HHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHH
LGYFYAAKVREQTLREQAYSQAIHDTGARLTHDVKNILQSVKTLLAAVDTATPEDSDRLL
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ALMKRQVPQLVARLSQTVDKLKQPTEMDAAHVPAQAWWAALRARYEHDDVGFSADALDET
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
PLPQDLFDSVADNLLANALRKRRGGVGVAVEVRLSLRPTVALTVTDTGAPAPEHVARNLF
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCEEEEEEECCCCCCHHHHHHHHH
LSPVASDFGLGVGLYQAARQAARSGFRLDLPANQAGQVTLRIQATDSRHPDISAP
HHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MLRSDFPVQPSSSMHEPTPNAPPMPWLSTLAVRLTRVAPGRWLALMLLALHAAVAFDAEA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHH
AISRGFLLAHYGLFLLWQPLVRSEARIEPRLALPVFAMAALLVLVDSPWVLALWLAVLAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LVGAVAASHDGRRQHLPYLLALAYLLALLLAWVLPQSLGDTALPDELQFAVRYGLPLLPL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHH
AILFLPGERQRGASSTLDFIYGLMLSLLVIVMALGVFAVVAVAKVGYAWALVQTLLGMAA
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLALSWLWNPRAGFTGLGQLTSRYLLSVGLPFEGWARRLATLAERERDPESFVRDALAD
HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LHELTWISGGRWQAARGEGHFGDQAPHRVEHAFHGLALAWYAPRPLTPSLALHVRLLSQL
HHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHH
LGYFYAAKVREQTLREQAYSQAIHDTGARLTHDVKNILQSVKTLLAAVDTATPEDSDRLL
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ALMKRQVPQLVARLSQTVDKLKQPTEMDAAHVPAQAWWAALRARYEHDDVGFSADALDET
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
PLPQDLFDSVADNLLANALRKRRGGVGVAVEVRLSLRPTVALTVTDTGAPAPEHVARNLF
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCEEEEEEECCCCCCHHHHHHHHH
LSPVASDFGLGVGLYQAARQAARSGFRLDLPANQAGQVTLRIQATDSRHPDISAP
HHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA