Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316531

Identifier: 74316531

GI number: 74316531

Start: 542433

End: 543233

Strand: Direct

Name: 74316531

Synonym: Tbd_0513

Alternate gene names: NA

Gene position: 542433-543233 (Clockwise)

Preceding gene: 74316530

Following gene: 74316532

Centisome position: 18.64

GC content: 57.55

Gene sequence:

>801_bases
ATGCGTGCATTTCCCATAGCGTATGTCTTGTTTTTGAGTACGTCCGCGTTTCCTCTTGCAGCCCAGGCAGTCGCTGTTTC
CGAGCTTCCAGCGTCGATCCAGTCCTGCATCACGTCAGGAAGTTGTGTGGTCAATTATCCGGGTGCTTACGATTCCGGAA
CAGCGAGCGCTTTTGAGATGTTTGACCTGTCGAGCCAGAAGTGGAATTGGCTAGTGCGATATAACCTGGTACCTCCGTCG
GGCCAAACCGTCATCGGAGGAGGGCCGAACACCGCTTACAGCGGCTACTTGTGGATGCAGGTCGCAAGCAGTTACAGCGC
TTCTGAGGCAGCCCACCCGGTCACCGTTTTTCTGGACAAGGTGACACCCGCACCCGACAGCATGTTTGACCAAAGCGGAG
ATTTGTCCCTGCTCGTGACGACCGCCGACTTGTTGGCAGGCGGCGCCTACTCGACGCTGGAAGACCACGGTGAGTATGGA
TACTTCGGTTCGGGGAGCTTGTCCGGTGAGCTCCCGCTGATCTGCCTTGCAGAGGGTTGCAAGATCGAGGCACGGCTTAA
TCTGTTGCAGTTGAACTACGCGAACGCGGGGTCGACGATCGTGATGACCGGCTTTGACGCCTCGGATATGCGCGGACTGG
TTTATTCGCAAGGCTCGTACTATTTCGATGGCGAACCACCCTACGGCACGAAACAGGCCTTTTACATCGCCGCTGTTCCG
GAACCCGGAATGGCGTGGCTGTTTGGTTTTGGCCTGCTCGGCGTTGGCGCCGTGGCACGGAGCCGGCGAACGGGCTTATA
G

Upstream 100 bases:

>100_bases
AACGGCCTGACAGCGTCTAAAAAGAACAAGCAGCGCGGCGCACCGCTAGAGGGGCGTCCGGATAACAAGAAAACGCATAA
CAACCTGAGGAGGAGAAATC

Downstream 100 bases:

>100_bases
ACGGATCGGGCCGCGCAAACCCGTTAGCCACGGCCGCCGGCTTTTGGTAGACTCCGACGCATGATTCGTGCCGATACGTT
CTTTTTTAGCCGCTTTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MRAFPIAYVLFLSTSAFPLAAQAVAVSELPASIQSCITSGSCVVNYPGAYDSGTASAFEMFDLSSQKWNWLVRYNLVPPS
GQTVIGGGPNTAYSGYLWMQVASSYSASEAAHPVTVFLDKVTPAPDSMFDQSGDLSLLVTTADLLAGGAYSTLEDHGEYG
YFGSGSLSGELPLICLAEGCKIEARLNLLQLNYANAGSTIVMTGFDASDMRGLVYSQGSYYFDGEPPYGTKQAFYIAAVP
EPGMAWLFGFGLLGVGAVARSRRTGL

Sequences:

>Translated_266_residues
MRAFPIAYVLFLSTSAFPLAAQAVAVSELPASIQSCITSGSCVVNYPGAYDSGTASAFEMFDLSSQKWNWLVRYNLVPPS
GQTVIGGGPNTAYSGYLWMQVASSYSASEAAHPVTVFLDKVTPAPDSMFDQSGDLSLLVTTADLLAGGAYSTLEDHGEYG
YFGSGSLSGELPLICLAEGCKIEARLNLLQLNYANAGSTIVMTGFDASDMRGLVYSQGSYYFDGEPPYGTKQAFYIAAVP
EPGMAWLFGFGLLGVGAVARSRRTGL
>Mature_266_residues
MRAFPIAYVLFLSTSAFPLAAQAVAVSELPASIQSCITSGSCVVNYPGAYDSGTASAFEMFDLSSQKWNWLVRYNLVPPS
GQTVIGGGPNTAYSGYLWMQVASSYSASEAAHPVTVFLDKVTPAPDSMFDQSGDLSLLVTTADLLAGGAYSTLEDHGEYG
YFGSGSLSGELPLICLAEGCKIEARLNLLQLNYANAGSTIVMTGFDASDMRGLVYSQGSYYFDGEPPYGTKQAFYIAAVP
EPGMAWLFGFGLLGVGAVARSRRTGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28121; Mature: 28121

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAFPIAYVLFLSTSAFPLAAQAVAVSELPASIQSCITSGSCVVNYPGAYDSGTASAFEM
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEE
FDLSSQKWNWLVRYNLVPPSGQTVIGGGPNTAYSGYLWMQVASSYSASEAAHPVTVFLDK
EECCCCCCEEEEEEEEECCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEC
VTPAPDSMFDQSGDLSLLVTTADLLAGGAYSTLEDHGEYGYFGSGSLSGELPLICLAEGC
CCCCCHHHHCCCCCEEEEEEEHHHHCCCCCHHHHHCCCCCEECCCCCCCCCCEEEEECCC
KIEARLNLLQLNYANAGSTIVMTGFDASDMRGLVYSQGSYYFDGEPPYGTKQAFYIAAVP
EEEEEEEEEEEEECCCCCEEEEECCCHHHCCEEEEECCCEEECCCCCCCCCCEEEEEECC
EPGMAWLFGFGLLGVGAVARSRRTGL
CCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRAFPIAYVLFLSTSAFPLAAQAVAVSELPASIQSCITSGSCVVNYPGAYDSGTASAFEM
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEE
FDLSSQKWNWLVRYNLVPPSGQTVIGGGPNTAYSGYLWMQVASSYSASEAAHPVTVFLDK
EECCCCCCEEEEEEEEECCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEC
VTPAPDSMFDQSGDLSLLVTTADLLAGGAYSTLEDHGEYGYFGSGSLSGELPLICLAEGC
CCCCCHHHHCCCCCEEEEEEEHHHHCCCCCHHHHHCCCCCEECCCCCCCCCCEEEEECCC
KIEARLNLLQLNYANAGSTIVMTGFDASDMRGLVYSQGSYYFDGEPPYGTKQAFYIAAVP
EEEEEEEEEEEEECCCCCEEEEECCCHHHCCEEEEECCCEEECCCCCCCCCCEEEEEECC
EPGMAWLFGFGLLGVGAVARSRRTGL
CCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA