| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is aroG [H]
Identifier: 74316532
GI number: 74316532
Start: 543458
End: 544534
Strand: Direct
Name: aroG [H]
Synonym: Tbd_0514
Alternate gene names: 74316532
Gene position: 543458-544534 (Clockwise)
Preceding gene: 74316531
Following gene: 74316533
Centisome position: 18.68
GC content: 66.76
Gene sequence:
>1077_bases ATGTCTGCCACCCGAACCGACGACACCCGCATCGAGCAAAGCGGCGAACTGCTTGCGCCGATGCAGATCATGCGCGAGCT GCGCGCGAGCGAGGCCGTCCATGCGCACGTCGCGCGCGCGCGCGGCGCGATCCACGACGTCCTGCGTGGCGCCGACGACC GCATGTTCGTCGTCGTCGGCCCCTGCTCGATCCACGACCCCGAGGCCGCGCTCGACTACGCGCGCAAGCTCAAGCCCCTC GCTGACGAGCTCGCGCACGAACTCATCGTCGTGATGCGGGTGTATTTCGAGAAGCCGCGCACGACCGTCGGCTGGAAAGG GCTCATCAACGATCCCCATCTCGACGAGAGCTTCGACATCAACGAGGGCCTGCGGCTCGCGCGAAAATTGTTGCTGGAGA TCAACGAAATCGGACTGCCCTGTGCGACCGAATTCCTCGACCTGATCTCGCCGCAGTACATCGCCGACCTCGTGAGCTGG GGTGCGATCGGTGCGCGCACGACCGAGTCGCAGTCGCATCGCCAGCTCGCGTCGGGGCTGTCGTGTCCCGTCGGCTTCAA GAACGGCACCGACGGCAGTCTGCGGATCGCGGTCGACGCGATCAAGGCCGCGGCGGCGCGCCACCATTTCATCTCGGTCA CCAAGTCGGGCCACGTCGGCGTCTTCAGCACCTCGGGCAACGAGGACGCCCACGTCATCCTGCGCGGCGGCAAGGCGCCG AACTACGACGCGGCGAGCGTCAATCTCGCGAGCGGCGAGCTGGCGGCGGCGGGTCTCAGACAGCAACTGATGATCGATTT CTCGCACGCCAATTCGAGCAAGCAGTACCAGCGCCAGATCGAAGTCGCCGCCGACGTCGCCGCTCAAATCGCGGGCGGCG ACACCCGCATCATCGGGGCGATGGTCGAGAGCCACCTCAATCCGGGCCGTCAGGACCTCGTCCCGGGGCAGTCGCTCGAG TATGCGAAGTCGATCACCGACGCGTGCATCGGGTGGGAGGACACGATTCCCCTGCTGCGCACGCTCGCCGACGCGGTGAA AAAACGCCGGCTGGCCGCGCCGGCGGATGAGGAATGA
Upstream 100 bases:
>100_bases GCTGAAGCGAACAGCACGGCCTTCACGAAACCGCCAGCCCGCTGGCGGTTTTTTTGTCTGCCGAGCCGCCGCGGGTAATC AAAACGAACGGAGCCTGAAC
Downstream 100 bases:
>100_bases GCGCGCTTACGGGGTAAAATGCGCGTGGCGGGCCTCCCCGCATGGCTAAGTCGTGAATCGGGTCAGGTCCGGAAGGAAGC AGCCACAGCGATCCATGCCA
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MSATRTDDTRIEQSGELLAPMQIMRELRASEAVHAHVARARGAIHDVLRGADDRMFVVVGPCSIHDPEAALDYARKLKPL ADELAHELIVVMRVYFEKPRTTVGWKGLINDPHLDESFDINEGLRLARKLLLEINEIGLPCATEFLDLISPQYIADLVSW GAIGARTTESQSHRQLASGLSCPVGFKNGTDGSLRIAVDAIKAAAARHHFISVTKSGHVGVFSTSGNEDAHVILRGGKAP NYDAASVNLASGELAAAGLRQQLMIDFSHANSSKQYQRQIEVAADVAAQIAGGDTRIIGAMVESHLNPGRQDLVPGQSLE YAKSITDACIGWEDTIPLLRTLADAVKKRRLAAPADEE
Sequences:
>Translated_358_residues MSATRTDDTRIEQSGELLAPMQIMRELRASEAVHAHVARARGAIHDVLRGADDRMFVVVGPCSIHDPEAALDYARKLKPL ADELAHELIVVMRVYFEKPRTTVGWKGLINDPHLDESFDINEGLRLARKLLLEINEIGLPCATEFLDLISPQYIADLVSW GAIGARTTESQSHRQLASGLSCPVGFKNGTDGSLRIAVDAIKAAAARHHFISVTKSGHVGVFSTSGNEDAHVILRGGKAP NYDAASVNLASGELAAAGLRQQLMIDFSHANSSKQYQRQIEVAADVAAQIAGGDTRIIGAMVESHLNPGRQDLVPGQSLE YAKSITDACIGWEDTIPLLRTLADAVKKRRLAAPADEE >Mature_357_residues SATRTDDTRIEQSGELLAPMQIMRELRASEAVHAHVARARGAIHDVLRGADDRMFVVVGPCSIHDPEAALDYARKLKPLA DELAHELIVVMRVYFEKPRTTVGWKGLINDPHLDESFDINEGLRLARKLLLEINEIGLPCATEFLDLISPQYIADLVSWG AIGARTTESQSHRQLASGLSCPVGFKNGTDGSLRIAVDAIKAAAARHHFISVTKSGHVGVFSTSGNEDAHVILRGGKAPN YDAASVNLASGELAAAGLRQQLMIDFSHANSSKQYQRQIEVAADVAAQIAGGDTRIIGAMVESHLNPGRQDLVPGQSLEY AKSITDACIGWEDTIPLLRTLADAVKKRRLAAPADEE
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786969, Length=346, Percent_Identity=65.0289017341041, Blast_Score=466, Evalue=1e-133, Organism=Escherichia coli, GI1787996, Length=345, Percent_Identity=53.0434782608696, Blast_Score=384, Evalue=1e-108, Organism=Escherichia coli, GI1788953, Length=343, Percent_Identity=54.8104956268222, Blast_Score=382, Evalue=1e-107, Organism=Saccharomyces cerevisiae, GI6319726, Length=348, Percent_Identity=54.0229885057471, Blast_Score=363, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6320240, Length=357, Percent_Identity=48.7394957983193, Blast_Score=355, Evalue=6e-99,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 38703; Mature: 38572
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATRTDDTRIEQSGELLAPMQIMRELRASEAVHAHVARARGAIHDVLRGADDRMFVVVG CCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC PCSIHDPEAALDYARKLKPLADELAHELIVVMRVYFEKPRTTVGWKGLINDPHLDESFDI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH NEGLRLARKLLLEINEIGLPCATEFLDLISPQYIADLVSWGAIGARTTESQSHRQLASGL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC SCPVGFKNGTDGSLRIAVDAIKAAAARHHFISVTKSGHVGVFSTSGNEDAHVILRGGKAP CCCCCCCCCCCCEEEEHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCCEEEEECCCCC NYDAASVNLASGELAAAGLRQQLMIDFSHANSSKQYQRQIEVAADVAAQIAGGDTRIIGA CCCCCEEEECCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH MVESHLNPGRQDLVPGQSLEYAKSITDACIGWEDTIPLLRTLADAVKKRRLAAPADEE HHHHHCCCCHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SATRTDDTRIEQSGELLAPMQIMRELRASEAVHAHVARARGAIHDVLRGADDRMFVVVG CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC PCSIHDPEAALDYARKLKPLADELAHELIVVMRVYFEKPRTTVGWKGLINDPHLDESFDI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH NEGLRLARKLLLEINEIGLPCATEFLDLISPQYIADLVSWGAIGARTTESQSHRQLASGL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC SCPVGFKNGTDGSLRIAVDAIKAAAARHHFISVTKSGHVGVFSTSGNEDAHVILRGGKAP CCCCCCCCCCCCEEEEHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCCEEEEECCCCC NYDAASVNLASGELAAAGLRQQLMIDFSHANSSKQYQRQIEVAADVAAQIAGGDTRIIGA CCCCCEEEECCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH MVESHLNPGRQDLVPGQSLEYAKSITDACIGWEDTIPLLRTLADAVKKRRLAAPADEE HHHHHCCCCHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]