| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316524
Identifier: 74316524
GI number: 74316524
Start: 532077
End: 532688
Strand: Direct
Name: 74316524
Synonym: Tbd_0506
Alternate gene names: NA
Gene position: 532077-532688 (Clockwise)
Preceding gene: 74316523
Following gene: 74316525
Centisome position: 18.29
GC content: 63.56
Gene sequence:
>612_bases ATGAGTCTTAAAAATACCAACCGCACTCTCTTATGCAGCCTGATGTTCCCGGCCGCGCTGCTGCTCGCCCCGCAGGCCCA AGCACTGGACCTCACGCCCGACCTTGCCGGCGCCTGGACCTCGCTCGATACCGACGCGCTGCAGGCCGACGAGGTCGAAA GCCTGGTCGGTGCCCCTTCCGGGTCGCTCGGCCTGGCATACAAGGTCGACGTCGAGGGCGGCGCCGAGGATGGAACCGCC ACGGGTTTCTACGACACCACGTTCACATTCGAAACCACCGGTGACGCCACGGGTGCGACGATCACCCAAAGCGGAATGTC AATCATCGACTGCCCATCGTGCTATCTCGTGGTCAAGGACGGCAACCATCAGCCGGCTCAATATCTCTTTGATATCAGCG GCTGGAACGGAACTGACGATATCAACCTGTCCGGGTTCTGGCAGGATCCTGCGCAAGGTGCGATCTCGCACATCGCGATC TGGAACGGCGACGGTAACGGCGGCGGCGGTGGCGGCGGTGGCGTCGTACCGATTCCGGAGGCCGAGACCTACGCCATGAT GCTCGCCGGGCTGGGCCTGATCGGCTTCGTCGTGCGTCGCCGCAGGGCCTGA
Upstream 100 bases:
>100_bases CAATGAACCGCGGCCCACTCTCGACACGTCTCGGGCGAACCCTGGCGTGCCTGGGGTGGCTGCTTTCGCGCCCCGCCATC TCATTGCACGGAGGTAAGTC
Downstream 100 bases:
>100_bases GCGGTCACCTCCCGAAAAAGCGCCGCGGGTCGGCGCTTTTTTTTGGTTTTTTTCCGAAAGGACCAAAAAAATTTCGCGTG GGCAGGGCTACCAGAGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MSLKNTNRTLLCSLMFPAALLLAPQAQALDLTPDLAGAWTSLDTDALQADEVESLVGAPSGSLGLAYKVDVEGGAEDGTA TGFYDTTFTFETTGDATGATITQSGMSIIDCPSCYLVVKDGNHQPAQYLFDISGWNGTDDINLSGFWQDPAQGAISHIAI WNGDGNGGGGGGGGVVPIPEAETYAMMLAGLGLIGFVVRRRRA
Sequences:
>Translated_203_residues MSLKNTNRTLLCSLMFPAALLLAPQAQALDLTPDLAGAWTSLDTDALQADEVESLVGAPSGSLGLAYKVDVEGGAEDGTA TGFYDTTFTFETTGDATGATITQSGMSIIDCPSCYLVVKDGNHQPAQYLFDISGWNGTDDINLSGFWQDPAQGAISHIAI WNGDGNGGGGGGGGVVPIPEAETYAMMLAGLGLIGFVVRRRRA >Mature_202_residues SLKNTNRTLLCSLMFPAALLLAPQAQALDLTPDLAGAWTSLDTDALQADEVESLVGAPSGSLGLAYKVDVEGGAEDGTAT GFYDTTFTFETTGDATGATITQSGMSIIDCPSCYLVVKDGNHQPAQYLFDISGWNGTDDINLSGFWQDPAQGAISHIAIW NGDGNGGGGGGGGVVPIPEAETYAMMLAGLGLIGFVVRRRRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21010; Mature: 20878
Theoretical pI: Translated: 3.87; Mature: 3.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKNTNRTLLCSLMFPAALLLAPQAQALDLTPDLAGAWTSLDTDALQADEVESLVGAPS CCCCCCCCEEEEEHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCC GSLGLAYKVDVEGGAEDGTATGFYDTTFTFETTGDATGATITQSGMSIIDCPSCYLVVKD CCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCEEECCCCEEEECCCEEEEEEC GNHQPAQYLFDISGWNGTDDINLSGFWQDPAQGAISHIAIWNGDGNGGGGGGGGVVPIPE CCCCCCEEEEEECCCCCCCCCCEEEEECCCHHCCEEEEEEECCCCCCCCCCCCCEEECCC AETYAMMLAGLGLIGFVVRRRRA CHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLKNTNRTLLCSLMFPAALLLAPQAQALDLTPDLAGAWTSLDTDALQADEVESLVGAPS CCCCCCCEEEEEHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCC GSLGLAYKVDVEGGAEDGTATGFYDTTFTFETTGDATGATITQSGMSIIDCPSCYLVVKD CCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCEEECCCCEEEECCCEEEEEEC GNHQPAQYLFDISGWNGTDDINLSGFWQDPAQGAISHIAIWNGDGNGGGGGGGGVVPIPE CCCCCCEEEEEECCCCCCCCCCEEEEECCCHHCCEEEEEEECCCCCCCCCCCCCEEECCC AETYAMMLAGLGLIGFVVRRRRA CHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA