| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316523
Identifier: 74316523
GI number: 74316523
Start: 531060
End: 531692
Strand: Direct
Name: 74316523
Synonym: Tbd_0505
Alternate gene names: NA
Gene position: 531060-531692 (Clockwise)
Preceding gene: 74316522
Following gene: 74316524
Centisome position: 18.25
GC content: 61.14
Gene sequence:
>633_bases ATGGAACTTCCAAAGCTTACCCGCACGCTGTTCCGTACCCTGATGGTCTCAGGGGCGCTGAGCGTTGCTCCGCAGGCCAA CGCGCTCGACATCGATGCCCTGACCCTCGCGGCAGACGGCTGGATCGTCAATACCAACTATTGGACAACCAACCAGAACG CGACGCTCACGACCAGCGAAGTGGCAAATCTGGTTGATCCGATGAGCCCGCCCGACCTTGGCGTCGCGTACAAGCAGGAT TACGACATGCTGCCGCCGGACGACGGCAGCGCGGCGATGTACTACTCGACGTCGTTCTCGGGCGATCCGAACGATGCAAC GATCAGCTGGGATGCAGGTGCAATGTATTACATCGCCTGCCCGTCCTGTTACCTGCTGGTGAAGGATGGCAGCGCCATTC CCTCCCAGTACGTTTTCGACATCAGCGGGTGGGACGGCCAGGAGGCGATCAATCTGTCCAATTTCTGGGCGAACACGCCG GGCGCGATTTCCTTCGTTGCGATCTACAACAACGCCCAACCGGGTGGCGGTGGCGGCGGCACGATCACGCCGATCCCCGA AGCCGACACCTACGCCATGATGCTGGCCGGCCTGGGTCTGGTCGGATTCGCTGCAAGGCGCAGATTGAGCTGA
Upstream 100 bases:
>100_bases GGACCAGGGTCTTTGTATTTGCCTGTCGGCTCGATTCTTGCGGCCATCAAAAGGCCATGCCTAACGCGTGGTCAAATTGT CTACAGAGGAGACAGGTCAA
Downstream 100 bases:
>100_bases AGTCAACGCCCAGTGAAACAGCGCCGCCACGGCGCTGTTTTTTTTCCCCACCCATGGCCGACTGTCACGGCGTTCCGCGC GCGGGCCGTTGACGCCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MELPKLTRTLFRTLMVSGALSVAPQANALDIDALTLAADGWIVNTNYWTTNQNATLTTSEVANLVDPMSPPDLGVAYKQD YDMLPPDDGSAAMYYSTSFSGDPNDATISWDAGAMYYIACPSCYLLVKDGSAIPSQYVFDISGWDGQEAINLSNFWANTP GAISFVAIYNNAQPGGGGGGTITPIPEADTYAMMLAGLGLVGFAARRRLS
Sequences:
>Translated_210_residues MELPKLTRTLFRTLMVSGALSVAPQANALDIDALTLAADGWIVNTNYWTTNQNATLTTSEVANLVDPMSPPDLGVAYKQD YDMLPPDDGSAAMYYSTSFSGDPNDATISWDAGAMYYIACPSCYLLVKDGSAIPSQYVFDISGWDGQEAINLSNFWANTP GAISFVAIYNNAQPGGGGGGTITPIPEADTYAMMLAGLGLVGFAARRRLS >Mature_210_residues MELPKLTRTLFRTLMVSGALSVAPQANALDIDALTLAADGWIVNTNYWTTNQNATLTTSEVANLVDPMSPPDLGVAYKQD YDMLPPDDGSAAMYYSTSFSGDPNDATISWDAGAMYYIACPSCYLLVKDGSAIPSQYVFDISGWDGQEAINLSNFWANTP GAISFVAIYNNAQPGGGGGGTITPIPEADTYAMMLAGLGLVGFAARRRLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22304; Mature: 22304
Theoretical pI: Translated: 3.80; Mature: 3.80
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELPKLTRTLFRTLMVSGALSVAPQANALDIDALTLAADGWIVNTNYWTTNQNATLTTSE CCCHHHHHHHHHHHHHHCCEEECCCCCCEEEEEEEEEECCEEEECCEEECCCCCEEEHHH VANLVDPMSPPDLGVAYKQDYDMLPPDDGSAAMYYSTSFSGDPNDATISWDAGAMYYIAC HHHHHCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCEEEEEEC PSCYLLVKDGSAIPSQYVFDISGWDGQEAINLSNFWANTPGAISFVAIYNNAQPGGGGGG CCEEEEEECCCCCCCEEEEEECCCCCCCEEEHHHHCCCCCCCEEEEEEEECCCCCCCCCC TITPIPEADTYAMMLAGLGLVGFAARRRLS CCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MELPKLTRTLFRTLMVSGALSVAPQANALDIDALTLAADGWIVNTNYWTTNQNATLTTSE CCCHHHHHHHHHHHHHHCCEEECCCCCCEEEEEEEEEECCEEEECCEEECCCCCEEEHHH VANLVDPMSPPDLGVAYKQDYDMLPPDDGSAAMYYSTSFSGDPNDATISWDAGAMYYIAC HHHHHCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCEEEEEEC PSCYLLVKDGSAIPSQYVFDISGWDGQEAINLSNFWANTPGAISFVAIYNNAQPGGGGGG CCEEEEEECCCCCCCEEEEEECCCCCCCEEEHHHHCCCCCCCEEEEEEEECCCCCCCCCC TITPIPEADTYAMMLAGLGLVGFAARRRLS CCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA