Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316523

Identifier: 74316523

GI number: 74316523

Start: 531060

End: 531692

Strand: Direct

Name: 74316523

Synonym: Tbd_0505

Alternate gene names: NA

Gene position: 531060-531692 (Clockwise)

Preceding gene: 74316522

Following gene: 74316524

Centisome position: 18.25

GC content: 61.14

Gene sequence:

>633_bases
ATGGAACTTCCAAAGCTTACCCGCACGCTGTTCCGTACCCTGATGGTCTCAGGGGCGCTGAGCGTTGCTCCGCAGGCCAA
CGCGCTCGACATCGATGCCCTGACCCTCGCGGCAGACGGCTGGATCGTCAATACCAACTATTGGACAACCAACCAGAACG
CGACGCTCACGACCAGCGAAGTGGCAAATCTGGTTGATCCGATGAGCCCGCCCGACCTTGGCGTCGCGTACAAGCAGGAT
TACGACATGCTGCCGCCGGACGACGGCAGCGCGGCGATGTACTACTCGACGTCGTTCTCGGGCGATCCGAACGATGCAAC
GATCAGCTGGGATGCAGGTGCAATGTATTACATCGCCTGCCCGTCCTGTTACCTGCTGGTGAAGGATGGCAGCGCCATTC
CCTCCCAGTACGTTTTCGACATCAGCGGGTGGGACGGCCAGGAGGCGATCAATCTGTCCAATTTCTGGGCGAACACGCCG
GGCGCGATTTCCTTCGTTGCGATCTACAACAACGCCCAACCGGGTGGCGGTGGCGGCGGCACGATCACGCCGATCCCCGA
AGCCGACACCTACGCCATGATGCTGGCCGGCCTGGGTCTGGTCGGATTCGCTGCAAGGCGCAGATTGAGCTGA

Upstream 100 bases:

>100_bases
GGACCAGGGTCTTTGTATTTGCCTGTCGGCTCGATTCTTGCGGCCATCAAAAGGCCATGCCTAACGCGTGGTCAAATTGT
CTACAGAGGAGACAGGTCAA

Downstream 100 bases:

>100_bases
AGTCAACGCCCAGTGAAACAGCGCCGCCACGGCGCTGTTTTTTTTCCCCACCCATGGCCGACTGTCACGGCGTTCCGCGC
GCGGGCCGTTGACGCCGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MELPKLTRTLFRTLMVSGALSVAPQANALDIDALTLAADGWIVNTNYWTTNQNATLTTSEVANLVDPMSPPDLGVAYKQD
YDMLPPDDGSAAMYYSTSFSGDPNDATISWDAGAMYYIACPSCYLLVKDGSAIPSQYVFDISGWDGQEAINLSNFWANTP
GAISFVAIYNNAQPGGGGGGTITPIPEADTYAMMLAGLGLVGFAARRRLS

Sequences:

>Translated_210_residues
MELPKLTRTLFRTLMVSGALSVAPQANALDIDALTLAADGWIVNTNYWTTNQNATLTTSEVANLVDPMSPPDLGVAYKQD
YDMLPPDDGSAAMYYSTSFSGDPNDATISWDAGAMYYIACPSCYLLVKDGSAIPSQYVFDISGWDGQEAINLSNFWANTP
GAISFVAIYNNAQPGGGGGGTITPIPEADTYAMMLAGLGLVGFAARRRLS
>Mature_210_residues
MELPKLTRTLFRTLMVSGALSVAPQANALDIDALTLAADGWIVNTNYWTTNQNATLTTSEVANLVDPMSPPDLGVAYKQD
YDMLPPDDGSAAMYYSTSFSGDPNDATISWDAGAMYYIACPSCYLLVKDGSAIPSQYVFDISGWDGQEAINLSNFWANTP
GAISFVAIYNNAQPGGGGGGTITPIPEADTYAMMLAGLGLVGFAARRRLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22304; Mature: 22304

Theoretical pI: Translated: 3.80; Mature: 3.80

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELPKLTRTLFRTLMVSGALSVAPQANALDIDALTLAADGWIVNTNYWTTNQNATLTTSE
CCCHHHHHHHHHHHHHHCCEEECCCCCCEEEEEEEEEECCEEEECCEEECCCCCEEEHHH
VANLVDPMSPPDLGVAYKQDYDMLPPDDGSAAMYYSTSFSGDPNDATISWDAGAMYYIAC
HHHHHCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCEEEEEEC
PSCYLLVKDGSAIPSQYVFDISGWDGQEAINLSNFWANTPGAISFVAIYNNAQPGGGGGG
CCEEEEEECCCCCCCEEEEEECCCCCCCEEEHHHHCCCCCCCEEEEEEEECCCCCCCCCC
TITPIPEADTYAMMLAGLGLVGFAARRRLS
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELPKLTRTLFRTLMVSGALSVAPQANALDIDALTLAADGWIVNTNYWTTNQNATLTTSE
CCCHHHHHHHHHHHHHHCCEEECCCCCCEEEEEEEEEECCEEEECCEEECCCCCEEEHHH
VANLVDPMSPPDLGVAYKQDYDMLPPDDGSAAMYYSTSFSGDPNDATISWDAGAMYYIAC
HHHHHCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCEEEEEEC
PSCYLLVKDGSAIPSQYVFDISGWDGQEAINLSNFWANTPGAISFVAIYNNAQPGGGGGG
CCEEEEEECCCCCCCEEEEEECCCCCCCEEEHHHHCCCCCCCEEEEEEEECCCCCCCCCC
TITPIPEADTYAMMLAGLGLVGFAARRRLS
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA