| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316525
Identifier: 74316525
GI number: 74316525
Start: 533043
End: 534863
Strand: Direct
Name: 74316525
Synonym: Tbd_0507
Alternate gene names: NA
Gene position: 533043-534863 (Clockwise)
Preceding gene: 74316524
Following gene: 74316527
Centisome position: 18.32
GC content: 67.66
Gene sequence:
>1821_bases ATGTCACGTCACAGCCCATTCCCTGTCCACCTTTCCGCCACGCACCGCGCCGAGCGCGACGGCTCCGCCCGCCTCGGCCT AAGCCTGCTGGCGGCCGCCATGCTCGCGAGCTACGCCGGTCTCGGCGAAGCCGCGCCGCAGGCCACGCCGCCGGCTACGG TCGCGAAAGCGCAACCCTATCTCGGCTGGGCCAAGGGCCGGCTGCTCGTCGCGCCGCGAGCGGGCTTGCCCCCCGGCCAG CTCGACAAGGCACTCAGAAAGGTAAACGGGCGCTCGGCGACCCACATCAAGCCCTTGAACGTGCACGTCGTCGAGTTGCC GGTGGGTGCCGACGAGGTGAGCGCGGCGCGCGAGTTGCGCAAGAACCGCAGCTTCAAATACGTCGAACTCGACATGGCGG TTGCGGCGGCGGCTACGGTGACCGATCCCGCCTACGGCAACAGCTGGGCGTTGCCGAAAATCCAGGCACCGACCGCGTGG GACAGCAGCAACGGCAGCGGTGTGACCGTCGCCATCCTCGATACCGGCCTCGACGCCGTCCACCCCGATCTCGTCGCCAA CGTCGTACCGGGCTGGAACGTCTACGACAACAACTCCAATACCGCCGACGTCAACGGTCACGGCACCTGGGTCGCCGGCG TCGCGGCGATGGCGGCGAACAACGCCAAGGGCAGCGCGGGCGTGGCGTGGGGCGCGAAGATCATGCCGATACGCATCGCC GATGCCAATGCCTACGCCTACTGGAGCACGGTCGCGCAGGGCATTTACTGGGCGGCGGACAACGGCGCCAAGGTGGTCAA CATCAGCTACAACGGCGTGTCGGGAAGCTCGACCGTGCAGTCCGCGGCGCAGTATCTGCGCGGGAAGGGCGGCGTCGTGA TCGTGGCGGCCGGCAATAGCGGCGGCCTGGAGAGCATCGCCGCCAACGACTCGCTGCTCACGGTCGCGGCGACCGATCAG AACGACGTACGTGCGAGCTTCTCCAGCTACGGCGCCTATGTTGACCTGTCCGCGCCGGGGGTGAATCTCTATACGACGAC GGTCGGCGGCGGCTTCGCCAACGCGTCGGGCACCTCGTTTTCCAGTCCGGTCGTCGCCGCGACGGCCGCGCTGATGCTGT CGGCCAACGCCAAGCTTGCGCCTGCCGACGTGGACCGCATTCTCAAGGCGACCGCTCGCGATCTCGGTACGGCGGGCTAT GACCAGTACCACGGCACGGGCCGCGTCAATGCCGCGTCGGCCGTGCAGAGCGCCAAGCAGACGATCGCGGCGGACACCCA AGCGCCAACGGTCAGCATCGCGTCGCCGACTGGTGGCCAGGTTTCCGGCGTGGTCCCGGTCGACGTCCTGGCGTCGGACA ACGTCGGTGTGACGCGCGCCGACTTCTACGTCAACGGCCAGCTCGTCGCGACCGATGCGCTGGCGCCGTTCGCCTTCGCC TGGGACACGACGACCAAAGCGGACGGCAGCTACACCCTGAGCGTGCAGGCCTACGACGCCGCCGGCAACCGCGGGACGTC GCCTTCGGTCACCGTCACCAGCGGCAACGACAGCGCCGCCCCGACGATCGCCAGCTTCAGCCTGACCGACGGCATGAAGC TCTCGGGCAAGCAGATGGTCAAGGTCAGCGCGAGCGACAACCAGAAGGTCGCAAAGATTTCCTTGGTGATCGACGGCAAG GAAGTCGCCACCGCGTTCGGCGGTTCGCTCAGCTACAACTGGAATACCAACAAGCTGGCGCGGGGTGCGCACACCGTGAC CGTGCGCGTGACCGACAACTCGGGCAACGTCACGACGAAGACCGTGACGGTCTACAAGTGA
Upstream 100 bases:
>100_bases ACCGGTCTCGAAAGAGATAGCGGCGCTGCCGTGGATGACCCGTGCTGGGTCCCCAGCGTGTGCATGCCTGTCGGGAGTTC TTCGAACGCCAGGAGCCCCC
Downstream 100 bases:
>100_bases GCTGCCACACATGGCCGAATAGGGGAGCGCCCTTCGGGGCGCTTTTTTTCGCCTTATTGAACCGGCGGCCGGGCGAGTGC GGCCGCGACGCTGACCAGTT
Product: serine protease
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 606; Mature: 605
Protein sequence:
>606_residues MSRHSPFPVHLSATHRAERDGSARLGLSLLAAAMLASYAGLGEAAPQATPPATVAKAQPYLGWAKGRLLVAPRAGLPPGQ LDKALRKVNGRSATHIKPLNVHVVELPVGADEVSAARELRKNRSFKYVELDMAVAAAATVTDPAYGNSWALPKIQAPTAW DSSNGSGVTVAILDTGLDAVHPDLVANVVPGWNVYDNNSNTADVNGHGTWVAGVAAMAANNAKGSAGVAWGAKIMPIRIA DANAYAYWSTVAQGIYWAADNGAKVVNISYNGVSGSSTVQSAAQYLRGKGGVVIVAAGNSGGLESIAANDSLLTVAATDQ NDVRASFSSYGAYVDLSAPGVNLYTTTVGGGFANASGTSFSSPVVAATAALMLSANAKLAPADVDRILKATARDLGTAGY DQYHGTGRVNAASAVQSAKQTIAADTQAPTVSIASPTGGQVSGVVPVDVLASDNVGVTRADFYVNGQLVATDALAPFAFA WDTTTKADGSYTLSVQAYDAAGNRGTSPSVTVTSGNDSAAPTIASFSLTDGMKLSGKQMVKVSASDNQKVAKISLVIDGK EVATAFGGSLSYNWNTNKLARGAHTVTVRVTDNSGNVTTKTVTVYK
Sequences:
>Translated_606_residues MSRHSPFPVHLSATHRAERDGSARLGLSLLAAAMLASYAGLGEAAPQATPPATVAKAQPYLGWAKGRLLVAPRAGLPPGQ LDKALRKVNGRSATHIKPLNVHVVELPVGADEVSAARELRKNRSFKYVELDMAVAAAATVTDPAYGNSWALPKIQAPTAW DSSNGSGVTVAILDTGLDAVHPDLVANVVPGWNVYDNNSNTADVNGHGTWVAGVAAMAANNAKGSAGVAWGAKIMPIRIA DANAYAYWSTVAQGIYWAADNGAKVVNISYNGVSGSSTVQSAAQYLRGKGGVVIVAAGNSGGLESIAANDSLLTVAATDQ NDVRASFSSYGAYVDLSAPGVNLYTTTVGGGFANASGTSFSSPVVAATAALMLSANAKLAPADVDRILKATARDLGTAGY DQYHGTGRVNAASAVQSAKQTIAADTQAPTVSIASPTGGQVSGVVPVDVLASDNVGVTRADFYVNGQLVATDALAPFAFA WDTTTKADGSYTLSVQAYDAAGNRGTSPSVTVTSGNDSAAPTIASFSLTDGMKLSGKQMVKVSASDNQKVAKISLVIDGK EVATAFGGSLSYNWNTNKLARGAHTVTVRVTDNSGNVTTKTVTVYK >Mature_605_residues SRHSPFPVHLSATHRAERDGSARLGLSLLAAAMLASYAGLGEAAPQATPPATVAKAQPYLGWAKGRLLVAPRAGLPPGQL DKALRKVNGRSATHIKPLNVHVVELPVGADEVSAARELRKNRSFKYVELDMAVAAAATVTDPAYGNSWALPKIQAPTAWD SSNGSGVTVAILDTGLDAVHPDLVANVVPGWNVYDNNSNTADVNGHGTWVAGVAAMAANNAKGSAGVAWGAKIMPIRIAD ANAYAYWSTVAQGIYWAADNGAKVVNISYNGVSGSSTVQSAAQYLRGKGGVVIVAAGNSGGLESIAANDSLLTVAATDQN DVRASFSSYGAYVDLSAPGVNLYTTTVGGGFANASGTSFSSPVVAATAALMLSANAKLAPADVDRILKATARDLGTAGYD QYHGTGRVNAASAVQSAKQTIAADTQAPTVSIASPTGGQVSGVVPVDVLASDNVGVTRADFYVNGQLVATDALAPFAFAW DTTTKADGSYTLSVQAYDAAGNRGTSPSVTVTSGNDSAAPTIASFSLTDGMKLSGKQMVKVSASDNQKVAKISLVIDGKE VATAFGGSLSYNWNTNKLARGAHTVTVRVTDNSGNVTTKTVTVYK
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI20336180, Length=358, Percent_Identity=26.8156424581006, Blast_Score=83, Evalue=6e-16, Organism=Homo sapiens, GI20336184, Length=359, Percent_Identity=26.7409470752089, Blast_Score=83, Evalue=9e-16, Organism=Homo sapiens, GI4505577, Length=358, Percent_Identity=26.8156424581006, Blast_Score=83, Evalue=9e-16, Organism=Homo sapiens, GI20336182, Length=359, Percent_Identity=26.7409470752089, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI20336188, Length=359, Percent_Identity=26.7409470752089, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI20336190, Length=359, Percent_Identity=26.7409470752089, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI27894285, Length=359, Percent_Identity=26.7409470752089, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI295424143, Length=334, Percent_Identity=26.9461077844311, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI20336242, Length=334, Percent_Identity=26.9461077844311, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI20336186, Length=309, Percent_Identity=27.1844660194175, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI76443679, Length=363, Percent_Identity=26.4462809917355, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI4506775, Length=274, Percent_Identity=29.9270072992701, Blast_Score=71, Evalue=4e-12, Organism=Homo sapiens, GI4505579, Length=329, Percent_Identity=26.1398176291793, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI31317307, Length=298, Percent_Identity=28.5234899328859, Blast_Score=67, Evalue=7e-11, Organism=Caenorhabditis elegans, GI71988308, Length=298, Percent_Identity=29.8657718120805, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71988312, Length=298, Percent_Identity=29.8657718120805, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71988315, Length=298, Percent_Identity=29.8657718120805, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71988321, Length=298, Percent_Identity=29.8657718120805, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71988301, Length=298, Percent_Identity=29.8657718120805, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71988297, Length=298, Percent_Identity=29.8657718120805, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71983555, Length=297, Percent_Identity=27.6094276094276, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI25141268, Length=297, Percent_Identity=27.6094276094276, Blast_Score=66, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6320775, Length=282, Percent_Identity=31.2056737588652, Blast_Score=87, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6324576, Length=244, Percent_Identity=31.9672131147541, Blast_Score=83, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6319893, Length=230, Percent_Identity=29.1304347826087, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI45550681, Length=275, Percent_Identity=29.0909090909091, Blast_Score=71, Evalue=3e-12, Organism=Drosophila melanogaster, GI17864552, Length=363, Percent_Identity=27.8236914600551, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24650058, Length=363, Percent_Identity=27.8236914600551, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI45553515, Length=363, Percent_Identity=27.5482093663912, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24650060, Length=363, Percent_Identity=27.8236914600551, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI45553513, Length=363, Percent_Identity=27.8236914600551, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24650056, Length=363, Percent_Identity=27.8236914600551, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 61904; Mature: 61773
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHSPFPVHLSATHRAERDGSARLGLSLLAAAMLASYAGLGEAAPQATPPATVAKAQPY CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCC LGWAKGRLLVAPRAGLPPGQLDKALRKVNGRSATHIKPLNVHVVELPVGADEVSAARELR CEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECEEEEEEECCCCHHHHHHHHHH KNRSFKYVELDMAVAAAATVTDPAYGNSWALPKIQAPTAWDSSNGSGVTVAILDTGLDAV HCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEECCCCCC HPDLVANVVPGWNVYDNNSNTADVNGHGTWVAGVAAMAANNAKGSAGVAWGAKIMPIRIA CCHHHHHCCCCCEEEECCCCEEEECCCCCHHHHHHHHHCCCCCCCCCEEECCEEEEEEEE DANAYAYWSTVAQGIYWAADNGAKVVNISYNGVSGSSTVQSAAQYLRGKGGVVIVAAGNS CCCCEEHHHHHHCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCC GGLESIAANDSLLTVAATDQNDVRASFSSYGAYVDLSAPGVNLYTTTVGGGFANASGTSF CCCCEEECCCCEEEEEECCCCHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCCCCC SSPVVAATAALMLSANAKLAPADVDRILKATARDLGTAGYDQYHGTGRVNAASAVQSAKQ CCCHHHHHEEHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH TIAADTQAPTVSIASPTGGQVSGVVPVDVLASDNVGVTRADFYVNGQLVATDALAPFAFA HHHCCCCCCEEEEECCCCCCEECEEEEEEEECCCCCEEEEEEEECCEEEEECCCCCEEEE WDTTTKADGSYTLSVQAYDAAGNRGTSPSVTVTSGNDSAAPTIASFSLTDGMKLSGKQMV ECCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCEECCCEEE KVSASDNQKVAKISLVIDGKEVATAFGGSLSYNWNTNKLARGAHTVTVRVTDNSGNVTTK EEECCCCCEEEEEEEEECCHHHHHHCCCEEEECCCCCCCCCCCEEEEEEEECCCCCEEEE TVTVYK EEEEEC >Mature Secondary Structure SRHSPFPVHLSATHRAERDGSARLGLSLLAAAMLASYAGLGEAAPQATPPATVAKAQPY CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCC LGWAKGRLLVAPRAGLPPGQLDKALRKVNGRSATHIKPLNVHVVELPVGADEVSAARELR CEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECEEEEEEECCCCHHHHHHHHHH KNRSFKYVELDMAVAAAATVTDPAYGNSWALPKIQAPTAWDSSNGSGVTVAILDTGLDAV HCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEECCCCCC HPDLVANVVPGWNVYDNNSNTADVNGHGTWVAGVAAMAANNAKGSAGVAWGAKIMPIRIA CCHHHHHCCCCCEEEECCCCEEEECCCCCHHHHHHHHHCCCCCCCCCEEECCEEEEEEEE DANAYAYWSTVAQGIYWAADNGAKVVNISYNGVSGSSTVQSAAQYLRGKGGVVIVAAGNS CCCCEEHHHHHHCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCC GGLESIAANDSLLTVAATDQNDVRASFSSYGAYVDLSAPGVNLYTTTVGGGFANASGTSF CCCCEEECCCCEEEEEECCCCHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCCCCC SSPVVAATAALMLSANAKLAPADVDRILKATARDLGTAGYDQYHGTGRVNAASAVQSAKQ CCCHHHHHEEHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH TIAADTQAPTVSIASPTGGQVSGVVPVDVLASDNVGVTRADFYVNGQLVATDALAPFAFA HHHCCCCCCEEEEECCCCCCEECEEEEEEEECCCCCEEEEEEEECCEEEEECCCCCEEEE WDTTTKADGSYTLSVQAYDAAGNRGTSPSVTVTSGNDSAAPTIASFSLTDGMKLSGKQMV ECCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCEECCCEEE KVSASDNQKVAKISLVIDGKEVATAFGGSLSYNWNTNKLARGAHTVTVRVTDNSGNVTTK EEECCCCCEEEEEEEEECCHHHHHHCCCEEEECCCCCCCCCCCEEEEEEEECCCCCEEEE TVTVYK EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]