Click here to switch to the map view.

The map label for this gene is yccA [H]

Identifier: 74316507

GI number: 74316507

Start: 508501

End: 509166

Strand: Reverse

Name: yccA [H]

Synonym: Tbd_0489

Alternate gene names: 74316507

Gene position: 509166-508501 (Counterclockwise)

Preceding gene: 74316508

Following gene: 74316506

Centisome position: 17.5

GC content: 63.51

Gene sequence:

>666_bases
ATGAATCCGCAAGTCACCACCCTCGGCCGCAGCCAGACTGCGGTCACCTCGACCAACAAGGTCGTCAAGAACACCTACAT
GCTGCTGGCGATGACGCTGGCGTTTTCGGCACTCACGGCCGGCCTGTCGATGGCCATGAACCTGCCGCATCCCGGCCTCA
TCATCACGCTCGTGGGTTACTTCGGCCTGCTGTTCCTGACGACCAAATTCCGCGACAGCGGCCTCGGCATCGCCTTCGTC
TTCGCCCTGACCGGCTTCATGGGCTACACGCTCGGACCGATCCTCAACGCCTACCTCGCGCTGCCGAACGGTGGCCAGGT
CGTGATGATGGCGATGGGCGGCACGGCGGCGATCTTCCTCGGCCTGTCGGCCTACGTCATGACGACCCGCCGCGACTTCA
GCTTCATGGGCGGCTTCCTGATGGTCGGCATCCTGGTCGCCTTCCTCGCCGGCCTCGGCGCGATCTTCTTCGAGGTGCCC
GCGCTGTCGCTCGCGGTCTCGGCGATGTTCGTGCTCCTGATGTCGGGTCTCATCCTCTACGAGACCAGCAACATCATCCA
CGGCGGCGAGACCAACTACGTGATGGCGACCGTCACCCTGTTCGTCGCGATCTTCAACCTCTTCACGAGCCTGCTGCATC
TGCTCGGCTTCGCCAGCAACGACTAG

Upstream 100 bases:

>100_bases
CTACCGTCACGGTATGCTCGCGGCACGACGCATCGGGGAACCTGTGCCGCGCTCAGGACTCTGTACGATACGACGTTGCA
ATCATTCAAGAGGAGCCTAG

Downstream 100 bases:

>100_bases
GGTCAGCTGCTTCGGAAACAACGGCGTCCGTGTGGCGCCGTTGTTTTTTCAGCCGCCAGACCCGGCGCCCGATGCCCGAT
TTCTTCGATACCCACTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MNPQVTTLGRSQTAVTSTNKVVKNTYMLLAMTLAFSALTAGLSMAMNLPHPGLIITLVGYFGLLFLTTKFRDSGLGIAFV
FALTGFMGYTLGPILNAYLALPNGGQVVMMAMGGTAAIFLGLSAYVMTTRRDFSFMGGFLMVGILVAFLAGLGAIFFEVP
ALSLAVSAMFVLLMSGLILYETSNIIHGGETNYVMATVTLFVAIFNLFTSLLHLLGFASND

Sequences:

>Translated_221_residues
MNPQVTTLGRSQTAVTSTNKVVKNTYMLLAMTLAFSALTAGLSMAMNLPHPGLIITLVGYFGLLFLTTKFRDSGLGIAFV
FALTGFMGYTLGPILNAYLALPNGGQVVMMAMGGTAAIFLGLSAYVMTTRRDFSFMGGFLMVGILVAFLAGLGAIFFEVP
ALSLAVSAMFVLLMSGLILYETSNIIHGGETNYVMATVTLFVAIFNLFTSLLHLLGFASND
>Mature_221_residues
MNPQVTTLGRSQTAVTSTNKVVKNTYMLLAMTLAFSALTAGLSMAMNLPHPGLIITLVGYFGLLFLTTKFRDSGLGIAFV
FALTGFMGYTLGPILNAYLALPNGGQVVMMAMGGTAAIFLGLSAYVMTTRRDFSFMGGFLMVGILVAFLAGLGAIFFEVP
ALSLAVSAMFVLLMSGLILYETSNIIHGGETNYVMATVTLFVAIFNLFTSLLHLLGFASND

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787205, Length=218, Percent_Identity=55.9633027522936, Blast_Score=238, Evalue=3e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006213
- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 23449; Mature: 23449

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPQVTTLGRSQTAVTSTNKVVKNTYMLLAMTLAFSALTAGLSMAMNLPHPGLIITLVGY
CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
FGLLFLTTKFRDSGLGIAFVFALTGFMGYTLGPILNAYLALPNGGQVVMMAMGGTAAIFL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHH
GLSAYVMTTRRDFSFMGGFLMVGILVAFLAGLGAIFFEVPALSLAVSAMFVLLMSGLILY
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEE
ETSNIIHGGETNYVMATVTLFVAIFNLFTSLLHLLGFASND
ECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNPQVTTLGRSQTAVTSTNKVVKNTYMLLAMTLAFSALTAGLSMAMNLPHPGLIITLVGY
CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
FGLLFLTTKFRDSGLGIAFVFALTGFMGYTLGPILNAYLALPNGGQVVMMAMGGTAAIFL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHH
GLSAYVMTTRRDFSFMGGFLMVGILVAFLAGLGAIFFEVPALSLAVSAMFVLLMSGLILY
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEE
ETSNIIHGGETNYVMATVTLFVAIFNLFTSLLHLLGFASND
ECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]