Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316459

Identifier: 74316459

GI number: 74316459

Start: 461922

End: 462557

Strand: Direct

Name: 74316459

Synonym: Tbd_0441

Alternate gene names: NA

Gene position: 461922-462557 (Clockwise)

Preceding gene: 74316458

Following gene: 74316460

Centisome position: 15.87

GC content: 62.26

Gene sequence:

>636_bases
GTGCGAGCCGTCCGCTTCTTTGTTTCCGACGGAAGCATGAAGCGTTATTTCATTACCGGCCTGCTGATCTGGGTCCCACT
GGGGATCACGCTGTGGGTGCTCGATCTGCTGATCGGCACGCTCGACCAGAGCCTCATGGTGCTGCCGGCCGAATGGCAGC
CCGAAGCGTGGATCGGCATGCGCATCCGCGGCCTGGGCGTCATCCTGACGCTGCTCGTGATTCTGCTCACCGGCGTGTTC
GCGACCAATTTCTTTGGCAACAAGATCATCGGCCTGTGGGAGCGCCTGTTGATCCGCATCCCGGTCGTGAAGACCATATA
CGGCGGGGTTAAGCAGGTGTCCGACACCCTGCTCTCGGGCAGCGGCCACGCCTTCAGGAAGGTCTTGCTCGTGCGCTATC
CGCATGCGCAGGCGTGGTCGCTCGCGTTCCAGACCAACGTTCCCGACGAGGTCGCGCGTGCCTTGCCGGACGAGCACGTC
GCCGTCTTCGTCCCGACCACGCCGAGCCCGGTCAACGGTTTCTATTTTTATGTGAAGAAGAGCGAGGTGATCGAACTGGC
CGTGCCGGTCGACCGCGCGCTCAAATATATCGTCTCGATGGGCGTCGTTTCCGGCGACCCCCGGGGTAGCCAATAG

Upstream 100 bases:

>100_bases
AGCCCGCGGAGACCAAGACCGACGCGCCTTCGCACGCCTGCGGCACCGGTGCGTGTCCGGCATGTAACTGACGGCGCGTG
CGTCAACCGGGAAGCGGGCG

Downstream 100 bases:

>100_bases
GAAAAACGAACATGCGTACTCACTACTGCGGCGCGGTCACGGCCGCCGACGTCGGCAACACGGTCACTTTGTGCGGATGG
GCGCACCGGCGACGCGATCA

Product: transmembrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MRAVRFFVSDGSMKRYFITGLLIWVPLGITLWVLDLLIGTLDQSLMVLPAEWQPEAWIGMRIRGLGVILTLLVILLTGVF
ATNFFGNKIIGLWERLLIRIPVVKTIYGGVKQVSDTLLSGSGHAFRKVLLVRYPHAQAWSLAFQTNVPDEVARALPDEHV
AVFVPTTPSPVNGFYFYVKKSEVIELAVPVDRALKYIVSMGVVSGDPRGSQ

Sequences:

>Translated_211_residues
MRAVRFFVSDGSMKRYFITGLLIWVPLGITLWVLDLLIGTLDQSLMVLPAEWQPEAWIGMRIRGLGVILTLLVILLTGVF
ATNFFGNKIIGLWERLLIRIPVVKTIYGGVKQVSDTLLSGSGHAFRKVLLVRYPHAQAWSLAFQTNVPDEVARALPDEHV
AVFVPTTPSPVNGFYFYVKKSEVIELAVPVDRALKYIVSMGVVSGDPRGSQ
>Mature_211_residues
MRAVRFFVSDGSMKRYFITGLLIWVPLGITLWVLDLLIGTLDQSLMVLPAEWQPEAWIGMRIRGLGVILTLLVILLTGVF
ATNFFGNKIIGLWERLLIRIPVVKTIYGGVKQVSDTLLSGSGHAFRKVLLVRYPHAQAWSLAFQTNVPDEVARALPDEHV
AVFVPTTPSPVNGFYFYVKKSEVIELAVPVDRALKYIVSMGVVSGDPRGSQ

Specific function: Unknown

COG id: COG2928

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23453; Mature: 23453

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAVRFFVSDGSMKRYFITGLLIWVPLGITLWVLDLLIGTLDQSLMVLPAEWQPEAWIGM
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEE
RIRGLGVILTLLVILLTGVFATNFFGNKIIGLWERLLIRIPVVKTIYGGVKQVSDTLLSG
EEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SGHAFRKVLLVRYPHAQAWSLAFQTNVPDEVARALPDEHVAVFVPTTPSPVNGFYFYVKK
CCHHHHHHHHEECCCCCCEEEEEECCCCHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEC
SEVIELAVPVDRALKYIVSMGVVSGDPRGSQ
CCEEEEECCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRAVRFFVSDGSMKRYFITGLLIWVPLGITLWVLDLLIGTLDQSLMVLPAEWQPEAWIGM
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEE
RIRGLGVILTLLVILLTGVFATNFFGNKIIGLWERLLIRIPVVKTIYGGVKQVSDTLLSG
EEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SGHAFRKVLLVRYPHAQAWSLAFQTNVPDEVARALPDEHVAVFVPTTPSPVNGFYFYVKK
CCHHHHHHHHEECCCCCCEEEEEECCCCHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEC
SEVIELAVPVDRALKYIVSMGVVSGDPRGSQ
CCEEEEECCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA