| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316458
Identifier: 74316458
GI number: 74316458
Start: 461632
End: 461892
Strand: Direct
Name: 74316458
Synonym: Tbd_0440
Alternate gene names: NA
Gene position: 461632-461892 (Clockwise)
Preceding gene: 74316457
Following gene: 74316459
Centisome position: 15.86
GC content: 63.22
Gene sequence:
>261_bases ATGCCGATCTATGCCTACAAATGCAGTGCCTGCGGCTTCGCCCAGGATGAAATGCTAAAAGTGTCCGACGCGCCGTTGAC CGTGTGTCCATCGTGCGGCAAGGACGCCTACGCCAAGCAGCTCACCGCGGCAGGGTTCGCGCTCAAGGGAACCGGCTGGT ACGCCACCGATTTCAAGGGCGGTTCGAGCAAGCCCGCGGAGACCAAGACCGACGCGCCTTCGCACGCCTGCGGCACCGGT GCGTGTCCGGCATGTAACTGA
Upstream 100 bases:
>100_bases ATGGTAGCCGCCGAGGGCGCAGCCCTGCGGCCCCGCATCTTGGGGACTTGCGGGCTGGCGAGTATAATTTGCGCAACTTC TTGATTGTCGGAGAATTTTC
Downstream 100 bases:
>100_bases CGGCGCGTGCGTCAACCGGGAAGCGGGCGGTGCGAGCCGTCCGCTTCTTTGTTTCCGACGGAAGCATGAAGCGTTATTTC ATTACCGGCCTGCTGATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: FmdB Family Regulatory Protein; Type I Antifreeze Protein; Regulatory Protein; Regulatory Protein FmdB Family Protein; Regulatory Protein FmdB Family Domain-Containing; FmdB Transcriptional Regulator
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MPIYAYKCSACGFAQDEMLKVSDAPLTVCPSCGKDAYAKQLTAAGFALKGTGWYATDFKGGSSKPAETKTDAPSHACGTG ACPACN
Sequences:
>Translated_86_residues MPIYAYKCSACGFAQDEMLKVSDAPLTVCPSCGKDAYAKQLTAAGFALKGTGWYATDFKGGSSKPAETKTDAPSHACGTG ACPACN >Mature_85_residues PIYAYKCSACGFAQDEMLKVSDAPLTVCPSCGKDAYAKQLTAAGFALKGTGWYATDFKGGSSKPAETKTDAPSHACGTGA CPACN
Specific function: Unknown
COG id: COG2331
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8806; Mature: 8675
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 10.5 %Cys+Met (Translated Protein) 8.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIYAYKCSACGFAQDEMLKVSDAPLTVCPSCGKDAYAKQLTAAGFALKGTGWYATDFKG CCEEEEECCCCCCCCCCEEEECCCCEEECCCCCCHHHHHHHHCCCEEECCCCEEEECCCC GSSKPAETKTDAPSHACGTGACPACN CCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PIYAYKCSACGFAQDEMLKVSDAPLTVCPSCGKDAYAKQLTAAGFALKGTGWYATDFKG CEEEEECCCCCCCCCCEEEECCCCEEECCCCCCHHHHHHHHCCCEEECCCCEEEECCCC GSSKPAETKTDAPSHACGTGACPACN CCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA