| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is nadA [H]
Identifier: 74316239
GI number: 74316239
Start: 244278
End: 245309
Strand: Reverse
Name: nadA [H]
Synonym: Tbd_0221
Alternate gene names: 74316239
Gene position: 245309-244278 (Counterclockwise)
Preceding gene: 74316241
Following gene: 74316238
Centisome position: 8.43
GC content: 66.47
Gene sequence:
>1032_bases ATGGTGGAGGAAGTGCTAGACGCCGAAGAGCGCGCCTCGCTCAAGACCCGCATCAAGACGCTGATGAAGGAGCAGGATGC GGTGCTCGTCGCCCACTACTACACCTCGGCCGACCTCCAGGATCTGGCCGAGGAAACCGGCGGCTGCGTCTCCGATTCGC TCGAGATGGCGCGCTTCGGCCACGCCCACCCGGCGCGCACGCTGACCGTCGCGGGCGTGAAATTCATGGGCGAGACGGCG AAGATCCTCAACCCCGAGAAGCGCGTCCTGATGCCCGATCTCGGCGCCGAATGCTCGCTCGACCTCGCCTGTCCGGCCGA CGAATTCACGGCCTTCTGCGACGCCCACCCCGATCGTCTCTCGGTCGTCTACGCCAACACCAGCGCCGAAGTCAAAGCGC GTGCCGACTGGGTCGTGACCTCTGGTATCGCGGTCAAGATCGTGAAATACCTGCACCAGCAGGGCCACAAACTCTTGTGG GCGCCCGACCGCCACCTCGGCGAATACGTGCGTCGCGTCAGCGGCGCGGACATGATCCTGTGGCAGGGCTCATGCGTCGT GCACGAGGCCTTCAAAGCCGAGGCCCTCAAATCGCTGCACGCGGCGCACCCGGCGGCCGCGGTACTCGTGCATCCGGAGT CGCCCGAGTCGGTGATCGCGCTGGCCGACATCGTCGGCTCGACCACGCAGTTGATCGAAGCGGTGCGCACGCTACCCAAC CCCGAATTCATCGTCGCGACCGACAACGGCATCTTTCACAAGATGCACGCGGCCGCGCCCGGAAAGACGCTGATCGAGGC GCCCACGGCCGGCGAAGGCGCGACCTGCGTCTCGTGCGCGCACTGCCCGTGGATGGCGATGAACGGCCTGCGAAAACTCG CCGCCGTGCTCGAATCCGCGGCAGTCGGCAAGCGCAGCGCCAACGAGATCCACGTCGAAGAATCGGTCGGCCAGCGCGCG CGGCGCTCGATCCAGAAAATGCTGGACTTCGCCGCGGCCGAAAAAGCCGGCCGCATCCAGCTCGGCGACTGA
Upstream 100 bases:
>100_bases GCAAGGCTATACTTGCGATTCTTCGTTTGTCGAACGCCAGGCCGTGCCCGTGACTCCCGCCTTTCCTGTTCCGGTGAAAC CCGTCATTCAAGCCCCGCCC
Downstream 100 bases:
>100_bases GCATAGACAGCGTATGGCCGGAACCAGCCTTCTCGCCCTGCTCGACGACATCACCACCGTCCTCGACGACGTGTCGGTAC TGACCAAGGTCGCCGCCAAG
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MVEEVLDAEERASLKTRIKTLMKEQDAVLVAHYYTSADLQDLAEETGGCVSDSLEMARFGHAHPARTLTVAGVKFMGETA KILNPEKRVLMPDLGAECSLDLACPADEFTAFCDAHPDRLSVVYANTSAEVKARADWVVTSGIAVKIVKYLHQQGHKLLW APDRHLGEYVRRVSGADMILWQGSCVVHEAFKAEALKSLHAAHPAAAVLVHPESPESVIALADIVGSTTQLIEAVRTLPN PEFIVATDNGIFHKMHAAAPGKTLIEAPTAGEGATCVSCAHCPWMAMNGLRKLAAVLESAAVGKRSANEIHVEESVGQRA RRSIQKMLDFAAAEKAGRIQLGD
Sequences:
>Translated_343_residues MVEEVLDAEERASLKTRIKTLMKEQDAVLVAHYYTSADLQDLAEETGGCVSDSLEMARFGHAHPARTLTVAGVKFMGETA KILNPEKRVLMPDLGAECSLDLACPADEFTAFCDAHPDRLSVVYANTSAEVKARADWVVTSGIAVKIVKYLHQQGHKLLW APDRHLGEYVRRVSGADMILWQGSCVVHEAFKAEALKSLHAAHPAAAVLVHPESPESVIALADIVGSTTQLIEAVRTLPN PEFIVATDNGIFHKMHAAAPGKTLIEAPTAGEGATCVSCAHCPWMAMNGLRKLAAVLESAAVGKRSANEIHVEESVGQRA RRSIQKMLDFAAAEKAGRIQLGD >Mature_343_residues MVEEVLDAEERASLKTRIKTLMKEQDAVLVAHYYTSADLQDLAEETGGCVSDSLEMARFGHAHPARTLTVAGVKFMGETA KILNPEKRVLMPDLGAECSLDLACPADEFTAFCDAHPDRLSVVYANTSAEVKARADWVVTSGIAVKIVKYLHQQGHKLLW APDRHLGEYVRRVSGADMILWQGSCVVHEAFKAEALKSLHAAHPAAAVLVHPESPESVIALADIVGSTTQLIEAVRTLPN PEFIVATDNGIFHKMHAAAPGKTLIEAPTAGEGATCVSCAHCPWMAMNGLRKLAAVLESAAVGKRSANEIHVEESVGQRA RRSIQKMLDFAAAEKAGRIQLGD
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate [H]
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786964, Length=327, Percent_Identity=62.3853211009174, Blast_Score=439, Evalue=1e-124,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003473 [H]
Pfam domain/function: PF02445 NadA [H]
EC number: =2.5.1.72 [H]
Molecular weight: Translated: 36958; Mature: 36958
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEEVLDAEERASLKTRIKTLMKEQDAVLVAHYYTSADLQDLAEETGGCVSDSLEMARFG CCHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHCC HAHPARTLTVAGVKFMGETAKILNPEKRVLMPDLGAECSLDLACPADEFTAFCDAHPDRL CCCCCCEEEEHHHHHHCCHHHHCCCCHHEECCCCCCCCCEEECCCHHHHHHHHCCCCCEE SVVYANTSAEVKARADWVVTSGIAVKIVKYLHQQGHKLLWAPDRHLGEYVRRVSGADMIL EEEEECCCCCEEECCCEEEECCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCEEE WQGSCVVHEAFKAEALKSLHAAHPAAAVLVHPESPESVIALADIVGSTTQLIEAVRTLPN ECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCC PEFIVATDNGIFHKMHAAAPGKTLIEAPTAGEGATCVSCAHCPWMAMNGLRKLAAVLESA CCEEEEECCCCEEEHHCCCCCCEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH AVGKRSANEIHVEESVGQRARRSIQKMLDFAAAEKAGRIQLGD HCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC >Mature Secondary Structure MVEEVLDAEERASLKTRIKTLMKEQDAVLVAHYYTSADLQDLAEETGGCVSDSLEMARFG CCHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHCC HAHPARTLTVAGVKFMGETAKILNPEKRVLMPDLGAECSLDLACPADEFTAFCDAHPDRL CCCCCCEEEEHHHHHHCCHHHHCCCCHHEECCCCCCCCCEEECCCHHHHHHHHCCCCCEE SVVYANTSAEVKARADWVVTSGIAVKIVKYLHQQGHKLLWAPDRHLGEYVRRVSGADMIL EEEEECCCCCEEECCCEEEECCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCEEE WQGSCVVHEAFKAEALKSLHAAHPAAAVLVHPESPESVIALADIVGSTTQLIEAVRTLPN ECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCC PEFIVATDNGIFHKMHAAAPGKTLIEAPTAGEGATCVSCAHCPWMAMNGLRKLAAVLESA CCEEEEECCCCEEEHHCCCCCCEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH AVGKRSANEIHVEESVGQRARRSIQKMLDFAAAEKAGRIQLGD HCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA