Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is yedI [H]

Identifier: 74316238

GI number: 74316238

Start: 243329

End: 244264

Strand: Reverse

Name: yedI [H]

Synonym: Tbd_0220

Alternate gene names: 74316238

Gene position: 244264-243329 (Counterclockwise)

Preceding gene: 74316239

Following gene: 74316237

Centisome position: 8.39

GC content: 69.02

Gene sequence:

>936_bases
ATGGCCGGAACCAGCCTTCTCGCCCTGCTCGACGACATCACCACCGTCCTCGACGACGTGTCGGTACTGACCAAGGTCGC
CGCCAAGAAGACCTCGGGCGTGCTCGGCGACGACCTCGCACTCAACGCGCAGCAGGTCGCGGGCCTCAAGGCCGAACGCG
AACTGCCGGTGGTATGGGCCGTGGCCAAGGGCTCTTTCCGCAACAAGCTGATCCTCGTCCCGGCCGCACTCGCGATCAGC
GCGCTTGCGCCCTGGGCGATCACCCCGCTGCTGATGCTCGGCGGCGCCTTCCTTTGCTACGAGGGTTTCGAGAAACTCGC
GCACAAGTTTCTCCATAGCCGAAGTGAAGACGCGGCCCACCATGCCGAACTCACGCAGGCGCTCGCCGACCCGGCGGTCG
ACCTCGTGGCGCTCGAGCGCGACAAGATCAAGGGCGCGATCCGCACCGACTTCATCCTCTCGGCCGAGATCATCGTCATC
ACGCTGGGCACCGTCGCCGCGGCGGCGTTCGGCACCCGCGTCGCCGTGCTCGCCGGCATCGCGCTGCTGATGACCGTCGG
CGTCTACGGTCTGGTGGCCGGCATCGTCAAGCTCGACGACGCCGGCCTCCACCTGAGCCAAAAAACGGGCGGCCTTCAGC
GAGCGCTCGGGCGCGGCATTCTGCGCGCGGCCCCCTACCTGATGAAAACGCTCGCCATCGTCGGAACGGCCGCGATGTTC
CTGGTCGGCGGCGGCATCCTCGTGCATGGCATTCCGGCCGCGCACCATGGCGTCGAGGCGCTCGCCCATCAGGCTTCGGC
GCTGCCCGGGATCGGCGGGGCGCTGGGCGTCCTCGCTCCCCTCGTCATCGACGCACTGGTCGGGATCCTCGCGGGGGCCC
TGATTCTCGGCGTCGTGACGATCGTGCGCCGCCTCAGGCGCCGGTCGGCCGCCTGA

Upstream 100 bases:

>100_bases
GTCGGCCAGCGCGCGCGGCGCTCGATCCAGAAAATGCTGGACTTCGCCGCGGCCGAAAAAGCCGGCCGCATCCAGCTCGG
CGACTGAGCATAGACAGCGT

Downstream 100 bases:

>100_bases
GCGTTCACGCGGCGAAAATTCGCGCCCGCATTCGACGAAGCGAAGTCCCACCCTGCGTCCGACAGGGTTTCTGACGCCGC
GTGCAGGCCGACGGGGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MAGTSLLALLDDITTVLDDVSVLTKVAAKKTSGVLGDDLALNAQQVAGLKAERELPVVWAVAKGSFRNKLILVPAALAIS
ALAPWAITPLLMLGGAFLCYEGFEKLAHKFLHSRSEDAAHHAELTQALADPAVDLVALERDKIKGAIRTDFILSAEIIVI
TLGTVAAAAFGTRVAVLAGIALLMTVGVYGLVAGIVKLDDAGLHLSQKTGGLQRALGRGILRAAPYLMKTLAIVGTAAMF
LVGGGILVHGIPAAHHGVEALAHQASALPGIGGALGVLAPLVIDALVGILAGALILGVVTIVRRLRRRSAA

Sequences:

>Translated_311_residues
MAGTSLLALLDDITTVLDDVSVLTKVAAKKTSGVLGDDLALNAQQVAGLKAERELPVVWAVAKGSFRNKLILVPAALAIS
ALAPWAITPLLMLGGAFLCYEGFEKLAHKFLHSRSEDAAHHAELTQALADPAVDLVALERDKIKGAIRTDFILSAEIIVI
TLGTVAAAAFGTRVAVLAGIALLMTVGVYGLVAGIVKLDDAGLHLSQKTGGLQRALGRGILRAAPYLMKTLAIVGTAAMF
LVGGGILVHGIPAAHHGVEALAHQASALPGIGGALGVLAPLVIDALVGILAGALILGVVTIVRRLRRRSAA
>Mature_310_residues
AGTSLLALLDDITTVLDDVSVLTKVAAKKTSGVLGDDLALNAQQVAGLKAERELPVVWAVAKGSFRNKLILVPAALAISA
LAPWAITPLLMLGGAFLCYEGFEKLAHKFLHSRSEDAAHHAELTQALADPAVDLVALERDKIKGAIRTDFILSAEIIVIT
LGTVAAAAFGTRVAVLAGIALLMTVGVYGLVAGIVKLDDAGLHLSQKTGGLQRALGRGILRAAPYLMKTLAIVGTAAMFL
VGGGILVHGIPAAHHGVEALAHQASALPGIGGALGVLAPLVIDALVGILAGALILGVVTIVRRLRRRSAA

Specific function: Unknown

COG id: COG2354

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788268, Length=311, Percent_Identity=57.8778135048232, Blast_Score=332, Evalue=2e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008526 [H]

Pfam domain/function: PF05661 DUF808 [H]

EC number: NA

Molecular weight: Translated: 31890; Mature: 31759

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTSLLALLDDITTVLDDVSVLTKVAAKKTSGVLGDDLALNAQQVAGLKAERELPVVWA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHCCCCCCCCCEEEE
VAKGSFRNKLILVPAALAISALAPWAITPLLMLGGAFLCYEGFEKLAHKFLHSRSEDAAH
EECCCCCCCEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHH
HAELTQALADPAVDLVALERDKIKGAIRTDFILSAEIIVITLGTVAAAAFGTRVAVLAGI
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEHHHHEEEHHHHHHHHHHHHHHHHHHH
ALLMTVGVYGLVAGIVKLDDAGLHLSQKTGGLQRALGRGILRAAPYLMKTLAIVGTAAMF
HHHHHHHHHHHHHHHHHCCCCCCEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVGGGILVHGIPAAHHGVEALAHQASALPGIGGALGVLAPLVIDALVGILAGALILGVVT
HHCCCHHEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVRRLRRRSAA
HHHHHHHHCCC
>Mature Secondary Structure 
AGTSLLALLDDITTVLDDVSVLTKVAAKKTSGVLGDDLALNAQQVAGLKAERELPVVWA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHCCCCCCCCCEEEE
VAKGSFRNKLILVPAALAISALAPWAITPLLMLGGAFLCYEGFEKLAHKFLHSRSEDAAH
EECCCCCCCEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHH
HAELTQALADPAVDLVALERDKIKGAIRTDFILSAEIIVITLGTVAAAAFGTRVAVLAGI
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEHHHHEEEHHHHHHHHHHHHHHHHHHH
ALLMTVGVYGLVAGIVKLDDAGLHLSQKTGGLQRALGRGILRAAPYLMKTLAIVGTAAMF
HHHHHHHHHHHHHHHHHCCCCCCEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVGGGILVHGIPAAHHGVEALAHQASALPGIGGALGVLAPLVIDALVGILAGALILGVVT
HHCCCHHEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVRRLRRRSAA
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2527357; 7567469 [H]