| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316227
Identifier: 74316227
GI number: 74316227
Start: 228660
End: 229619
Strand: Direct
Name: 74316227
Synonym: Tbd_0209
Alternate gene names: NA
Gene position: 228660-229619 (Clockwise)
Preceding gene: 74316226
Following gene: 74316228
Centisome position: 7.86
GC content: 66.98
Gene sequence:
>960_bases ATGTCCCTTATTGACGTTTTCAACGGCGATGCCGACGGCATCTGCGCGCTTCACCAACTGCGCCTCGAGCAACCGGGCCA ATCCGAGCTCGTGACCGGCCCCAAGCGCGATATCAGTCTGCTCAAGCGCGTGACCGCAGACACGGGCGACCAGATCACCG TGCTCGATATCGCGCTGTCGAAGAATCGCGAAGCGCTCGACCGGCTGCTCGCCGTCGGGGCCCGCGTGCGCTACTTCGAC CATCACCAGCCGGGTGACGACCTGCCTCGCCATCCCGGCTTCGAACCGCACATCGACACCGACGCCAACGTCTGCACGAG CCTCCTGGTCAATGCGTACTTGCACGGCCGACGCCTGCCCTGGGCGGTGGTGGCCGCGTTCGGCGACAACCTGGCGGACG CGGCACGGCAGGCAGCCGCGCCGCTCGGGCTGGGCGAGGCGCAGTTGCAAAGCCTGCAGTCGCTTGGTGAGTGCCTCAAT TACAACGGTTACGGCGAGACGCTCGACGACCTCTTTTTCGACCCCGCCGACCTCTACCGCCAGCTGCGGCCCTTCGACGA CCCTTTGGCCTTCGTCGCCGAATCGACCGCCTACCGGACGCTGAGGACGGGCTTCGACAGCGACATGGCGCAGGCGCGCG CGGTGGGCGCCGCCGAGGACCGCGCGGCGGGGCGCATCTTCATGCTGCCGGCCGAGAAATGGGCACGACGCATTTCCGGC GTCTTCGGCAACGCGCTCGCCACCGCGTCGCCCCGACAGGCCCACGCCGTGCTCACGGCCAAGCCAGGCGGCGGCTACGT CGTCAGCGTGCGCGCGCCGCTTGCGAACAAGACCGGCGCCGACCAGTTGTGTAGCCAGTTCGAGACCGGCGGCGGGCGTA AAGGCGCGGCCGGCATCAACCACCTTCCCGAGTCGGAACTCGACCGATTCATTGCTGTTTTTTTCCAGATTTACAACTAG
Upstream 100 bases:
>100_bases TTGCGCTATGCGGGCGTGCATGTGCTTGTCATCGCCGGGCTTGCGTTCATACAATGGCCGCACTTCAGAACCGCCCGACG AACTCACGCCCAAGGCTCCG
Downstream 100 bases:
>100_bases CTCGTGCGCCTCCTCCCCACGAGCGTGCGCCCTATTCCATCGGACCTTGGAGCAGCATGGTGAATCAACTGATCGAGCCC TACGGCGGCACCCTCGTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: DHHA1 Domain Protein
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MSLIDVFNGDADGICALHQLRLEQPGQSELVTGPKRDISLLKRVTADTGDQITVLDIALSKNREALDRLLAVGARVRYFD HHQPGDDLPRHPGFEPHIDTDANVCTSLLVNAYLHGRRLPWAVVAAFGDNLADAARQAAAPLGLGEAQLQSLQSLGECLN YNGYGETLDDLFFDPADLYRQLRPFDDPLAFVAESTAYRTLRTGFDSDMAQARAVGAAEDRAAGRIFMLPAEKWARRISG VFGNALATASPRQAHAVLTAKPGGGYVVSVRAPLANKTGADQLCSQFETGGGRKGAAGINHLPESELDRFIAVFFQIYN
Sequences:
>Translated_319_residues MSLIDVFNGDADGICALHQLRLEQPGQSELVTGPKRDISLLKRVTADTGDQITVLDIALSKNREALDRLLAVGARVRYFD HHQPGDDLPRHPGFEPHIDTDANVCTSLLVNAYLHGRRLPWAVVAAFGDNLADAARQAAAPLGLGEAQLQSLQSLGECLN YNGYGETLDDLFFDPADLYRQLRPFDDPLAFVAESTAYRTLRTGFDSDMAQARAVGAAEDRAAGRIFMLPAEKWARRISG VFGNALATASPRQAHAVLTAKPGGGYVVSVRAPLANKTGADQLCSQFETGGGRKGAAGINHLPESELDRFIAVFFQIYN >Mature_318_residues SLIDVFNGDADGICALHQLRLEQPGQSELVTGPKRDISLLKRVTADTGDQITVLDIALSKNREALDRLLAVGARVRYFDH HQPGDDLPRHPGFEPHIDTDANVCTSLLVNAYLHGRRLPWAVVAAFGDNLADAARQAAAPLGLGEAQLQSLQSLGECLNY NGYGETLDDLFFDPADLYRQLRPFDDPLAFVAESTAYRTLRTGFDSDMAQARAVGAAEDRAAGRIFMLPAEKWARRISGV FGNALATASPRQAHAVLTAKPGGGYVVSVRAPLANKTGADQLCSQFETGGGRKGAAGINHLPESELDRFIAVFFQIYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34487; Mature: 34356
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIDVFNGDADGICALHQLRLEQPGQSELVTGPKRDISLLKRVTADTGDQITVLDIALS CCCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEHH KNREALDRLLAVGARVRYFDHHQPGDDLPRHPGFEPHIDTDANVCTSLLVNAYLHGRRLP CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC WAVVAAFGDNLADAARQAAAPLGLGEAQLQSLQSLGECLNYNGYGETLDDLFFDPADLYR HHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHH QLRPFDDPLAFVAESTAYRTLRTGFDSDMAQARAVGAAEDRAAGRIFMLPAEKWARRISG HHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHH VFGNALATASPRQAHAVLTAKPGGGYVVSVRAPLANKTGADQLCSQFETGGGRKGAAGIN HHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCC HLPESELDRFIAVFFQIYN CCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SLIDVFNGDADGICALHQLRLEQPGQSELVTGPKRDISLLKRVTADTGDQITVLDIALS CCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEHH KNREALDRLLAVGARVRYFDHHQPGDDLPRHPGFEPHIDTDANVCTSLLVNAYLHGRRLP CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC WAVVAAFGDNLADAARQAAAPLGLGEAQLQSLQSLGECLNYNGYGETLDDLFFDPADLYR HHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHH QLRPFDDPLAFVAESTAYRTLRTGFDSDMAQARAVGAAEDRAAGRIFMLPAEKWARRISG HHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHH VFGNALATASPRQAHAVLTAKPGGGYVVSVRAPLANKTGADQLCSQFETGGGRKGAAGIN HHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCC HLPESELDRFIAVFFQIYN CCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA