| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316226
Identifier: 74316226
GI number: 74316226
Start: 226352
End: 228673
Strand: Direct
Name: 74316226
Synonym: Tbd_0208
Alternate gene names: NA
Gene position: 226352-228673 (Clockwise)
Preceding gene: 74316225
Following gene: 74316227
Centisome position: 7.78
GC content: 67.01
Gene sequence:
>2322_bases ATGACCGGCGTAGCCGAAGGCACTCGCGTACGCCTGCCTCTGCTGCTTCTGGCGCTCGCCTATACGCTTTTCGTCGTCTA CGGGAGTCTCGTCCCGCTCGAATTCCGGCCGCTGTCGTGGGACACGGCGGTGGCCCGGTTCGGCGCCATGCCCTTCCTCA AGCTGGGCATCGGCTCGCGCGCCGACTGGATGGCGAACCTCCTGCTGTTCATTCCCCTGACCTTCGTCTGGATGGGCGTG CTGTCACCATCCGGCACCCTGCTCGGGCGGCTGGCTGCGACGCTCGTGCTGATTCCGCTCGCGACGGCTTTGAGTCTTGG CATCGAATTCGTCCAGCTGTTTTTCCCCCAGCGTACGGTGTCGCAGAACGACGTCTTCGCCGAGACACTGGGCGGCGTGC TGGGCGTCGCGCTGTGGTGGGTCGCCGGCGCGCGGTTCTCGGCATGGCTGCAAGGCTGGCGAGCGCAGCATTCCCGGGCC GCGCTGGCAGAGCGGATTGCCTGGACCTATTTCGCCGGCGTGCTGGTTTACAACGTGCTGCCGCTCGACCTGACGATCAG TGCGGTCGAGATCTTTCACAAATGGCAGGATGGTCGGGTCAATCTCATTCCCTTTGCGCGCCTGCCGGCCGACCCGTTCT ACGCGGTCTACGAAATCGCGACCGACGCCTTGCTCTGGGTCCCGCTTGCACTGCTGTGGCGGCTCGACGGAAAGCGCGGG CCCTGGCGCGCCTGGGGCATGACGCTCGTGACCGCGGCCACGCTCGAAGTGTTGCAGCTCTTCGTCTTTTCGCGCGTCAG CGACATCACCGATCTCTTCACCGCGGCAGCCGGCGCGGCCCTGGGCACGGGGATCGGAAGCCGCGTGCGCGGCCGCGGCG CGCACGCGGAGGGCTTGACGCGCGACCGGGGCACGTCATGGGCAATGCGGCGGTGGGCGCCTTTCGTGTTGACCGCACTG TGGATGGCCGCGCTCGCCCTCGTGTTCTGGTTCCCGTTCGACTTCCGGACCGACGGCGCGTTTGTCCGCACCCGCCTCGA CTTCGTCCTGCGCGTGCCCTTCGAGGTCTATTACTTCGGCACCGAGTACCGCGCGATCACCGAGGTCTTGCGCAAGACGC TGTTCTTCGCCCCGCTGGGCGCATTGCTCGCGTGGGGCGTCGCAGTCCAGCCGTGGCGCCTGCGCGCACCCTTGTTCGTG CTCGCACTGCTGCTTCTGGCCGCCGTGCCGGCAGTCATCGAATTCGGGCAGGTGATGCTGCCGCACAAGATTGCCGATAC GACGGACTGGTTCCTCGCGTGGGCCGGTGGTCTGGCCGGTTACGCGCTGGCCCGCCGGTTTGCCCGCGCGCCGCGCGTCG TGGCCGCGCCGCATGTCTCGCGGGGCGAGGAAGCGCACACGAATCCGGCGAGCCAGCCGGTCGGCTGGCATTTCGTGTTC TCGACCGCCGGCCTCGCACTGCTCCTGTGGCTACTCGGCCAGGCCGCCTTCGTGCCGTACAACGTGCGCGAGCTGTTGCA ACACGATAGCCCGGTACTCTCGGCGCTGCTTCTCGCGGTCGCCTGCTACTGGCTCGCGGTCTGGCCCCTGTGGCTCGCAC GCCGCCGCGTCTCGGCGCTTGCGCGTCTGCTTCAGTTGCCGTTCGGCTTGTTCGTCTACGGGCTCGTCGCCTTTCTGCTG CTGCGCTTCGCCGTTCCGGAGGAGAGCCTGCACGATCTGGTCGGAAGCCCGATTCTCGGGTGGGGCCAGTGGGAAACCGG CGTCCGATGGATTGCGCTCGCAAGCGTGCCCGGTGCCATGCTGTATCTCGCCGCGCAGAGCATTCGGCGCTGGCGGGGGC GGACGCTCGGCGCAATCCATTTCTGCGCCGTGCTCCCGGTGCTGGCCATCGCCTACTGGGCTGTCGTTCACCGTGCCGCC ACCGACAACCTCGTCGAACTCATCGCCACGCCGCGGCCACTCGCTTTCGCCGCACTTTGCGGCGCGCTCTGGCTGCTGTT TTTCGCGGCCGCGTCGGTCGCATCGCCGCAGTCCGCGTCCATGCGCTTCGGCAGGCCCATCGTGGTGGCGCTTTCGCTGC CGCTCGCCGCGTTACTGGTCCATTTCGGTCTCGCCGACGAGATCGACAAGTATGGTCAACGGTTCTCTGCGCTGCAGTTC CTGTTAAGCGCGGACCGTCAAAATTACGCGGCGCCGGCCTACATCTGGTTGCGCTATGCGGGCGTGCATGTGCTTGTCAT CGCCGGGCTTGCGTTCATACAATGGCCGCACTTCAGAACCGCCCGACGAACTCACGCCCAAGGCTCCGATGTCCCTTATT GA
Upstream 100 bases:
>100_bases ACACGCACGGCGCAGCACGTATCCCGCGACGGAACCCCGCCGCCCGCGCGCGAAGGAACTTCGGGAACCCACCCCACGCT GGCAGGAGCGCTTTCCGGCC
Downstream 100 bases:
>100_bases CGTTTTCAACGGCGATGCCGACGGCATCTGCGCGCTTCACCAACTGCGCCTCGAGCAACCGGGCCAATCCGAGCTCGTGA CCGGCCCCAAGCGCGATATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 773; Mature: 772
Protein sequence:
>773_residues MTGVAEGTRVRLPLLLLALAYTLFVVYGSLVPLEFRPLSWDTAVARFGAMPFLKLGIGSRADWMANLLLFIPLTFVWMGV LSPSGTLLGRLAATLVLIPLATALSLGIEFVQLFFPQRTVSQNDVFAETLGGVLGVALWWVAGARFSAWLQGWRAQHSRA ALAERIAWTYFAGVLVYNVLPLDLTISAVEIFHKWQDGRVNLIPFARLPADPFYAVYEIATDALLWVPLALLWRLDGKRG PWRAWGMTLVTAATLEVLQLFVFSRVSDITDLFTAAAGAALGTGIGSRVRGRGAHAEGLTRDRGTSWAMRRWAPFVLTAL WMAALALVFWFPFDFRTDGAFVRTRLDFVLRVPFEVYYFGTEYRAITEVLRKTLFFAPLGALLAWGVAVQPWRLRAPLFV LALLLLAAVPAVIEFGQVMLPHKIADTTDWFLAWAGGLAGYALARRFARAPRVVAAPHVSRGEEAHTNPASQPVGWHFVF STAGLALLLWLLGQAAFVPYNVRELLQHDSPVLSALLLAVACYWLAVWPLWLARRRVSALARLLQLPFGLFVYGLVAFLL LRFAVPEESLHDLVGSPILGWGQWETGVRWIALASVPGAMLYLAAQSIRRWRGRTLGAIHFCAVLPVLAIAYWAVVHRAA TDNLVELIATPRPLAFAALCGALWLLFFAAASVASPQSASMRFGRPIVVALSLPLAALLVHFGLADEIDKYGQRFSALQF LLSADRQNYAAPAYIWLRYAGVHVLVIAGLAFIQWPHFRTARRTHAQGSDVPY
Sequences:
>Translated_773_residues MTGVAEGTRVRLPLLLLALAYTLFVVYGSLVPLEFRPLSWDTAVARFGAMPFLKLGIGSRADWMANLLLFIPLTFVWMGV LSPSGTLLGRLAATLVLIPLATALSLGIEFVQLFFPQRTVSQNDVFAETLGGVLGVALWWVAGARFSAWLQGWRAQHSRA ALAERIAWTYFAGVLVYNVLPLDLTISAVEIFHKWQDGRVNLIPFARLPADPFYAVYEIATDALLWVPLALLWRLDGKRG PWRAWGMTLVTAATLEVLQLFVFSRVSDITDLFTAAAGAALGTGIGSRVRGRGAHAEGLTRDRGTSWAMRRWAPFVLTAL WMAALALVFWFPFDFRTDGAFVRTRLDFVLRVPFEVYYFGTEYRAITEVLRKTLFFAPLGALLAWGVAVQPWRLRAPLFV LALLLLAAVPAVIEFGQVMLPHKIADTTDWFLAWAGGLAGYALARRFARAPRVVAAPHVSRGEEAHTNPASQPVGWHFVF STAGLALLLWLLGQAAFVPYNVRELLQHDSPVLSALLLAVACYWLAVWPLWLARRRVSALARLLQLPFGLFVYGLVAFLL LRFAVPEESLHDLVGSPILGWGQWETGVRWIALASVPGAMLYLAAQSIRRWRGRTLGAIHFCAVLPVLAIAYWAVVHRAA TDNLVELIATPRPLAFAALCGALWLLFFAAASVASPQSASMRFGRPIVVALSLPLAALLVHFGLADEIDKYGQRFSALQF LLSADRQNYAAPAYIWLRYAGVHVLVIAGLAFIQWPHFRTARRTHAQGSDVPY >Mature_772_residues TGVAEGTRVRLPLLLLALAYTLFVVYGSLVPLEFRPLSWDTAVARFGAMPFLKLGIGSRADWMANLLLFIPLTFVWMGVL SPSGTLLGRLAATLVLIPLATALSLGIEFVQLFFPQRTVSQNDVFAETLGGVLGVALWWVAGARFSAWLQGWRAQHSRAA LAERIAWTYFAGVLVYNVLPLDLTISAVEIFHKWQDGRVNLIPFARLPADPFYAVYEIATDALLWVPLALLWRLDGKRGP WRAWGMTLVTAATLEVLQLFVFSRVSDITDLFTAAAGAALGTGIGSRVRGRGAHAEGLTRDRGTSWAMRRWAPFVLTALW MAALALVFWFPFDFRTDGAFVRTRLDFVLRVPFEVYYFGTEYRAITEVLRKTLFFAPLGALLAWGVAVQPWRLRAPLFVL ALLLLAAVPAVIEFGQVMLPHKIADTTDWFLAWAGGLAGYALARRFARAPRVVAAPHVSRGEEAHTNPASQPVGWHFVFS TAGLALLLWLLGQAAFVPYNVRELLQHDSPVLSALLLAVACYWLAVWPLWLARRRVSALARLLQLPFGLFVYGLVAFLLL RFAVPEESLHDLVGSPILGWGQWETGVRWIALASVPGAMLYLAAQSIRRWRGRTLGAIHFCAVLPVLAIAYWAVVHRAAT DNLVELIATPRPLAFAALCGALWLLFFAAASVASPQSASMRFGRPIVVALSLPLAALLVHFGLADEIDKYGQRFSALQFL LSADRQNYAAPAYIWLRYAGVHVLVIAGLAFIQWPHFRTARRTHAQGSDVPY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85429; Mature: 85298
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGVAEGTRVRLPLLLLALAYTLFVVYGSLVPLEFRPLSWDTAVARFGAMPFLKLGIGSR CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHCCCCHHHHCCCCC ADWMANLLLFIPLTFVWMGVLSPSGTLLGRLAATLVLIPLATALSLGIEFVQLFFPQRTV HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SQNDVFAETLGGVLGVALWWVAGARFSAWLQGWRAQHSRAALAERIAWTYFAGVLVYNVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLDLTISAVEIFHKWQDGRVNLIPFARLPADPFYAVYEIATDALLWVPLALLWRLDGKRG HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PWRAWGMTLVTAATLEVLQLFVFSRVSDITDLFTAAAGAALGTGIGSRVRGRGAHAEGLT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC RDRGTSWAMRRWAPFVLTALWMAALALVFWFPFDFRTDGAFVRTRLDFVLRVPFEVYYFG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEEC TEYRAITEVLRKTLFFAPLGALLAWGVAVQPWRLRAPLFVLALLLLAAVPAVIEFGQVML CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHC PHKIADTTDWFLAWAGGLAGYALARRFARAPRVVAAPHVSRGEEAHTNPASQPVGWHFVF CHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCEEHHH STAGLALLLWLLGQAAFVPYNVRELLQHDSPVLSALLLAVACYWLAVWPLWLARRRVSAL HHHHHHHHHHHHCCHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLLQLPFGLFVYGLVAFLLLRFAVPEESLHDLVGSPILGWGQWETGVRWIALASVPGAM HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHCCCEEEEEECCCHHH LYLAAQSIRRWRGRTLGAIHFCAVLPVLAIAYWAVVHRAATDNLVELIATPRPLAFAALC HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GALWLLFFAAASVASPQSASMRFGRPIVVALSLPLAALLVHFGLADEIDKYGQRFSALQF HHHHHHHHHHHHCCCCCCCCHHCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LLSADRQNYAAPAYIWLRYAGVHVLVIAGLAFIQWPHFRTARRTHAQGSDVPY HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC >Mature Secondary Structure TGVAEGTRVRLPLLLLALAYTLFVVYGSLVPLEFRPLSWDTAVARFGAMPFLKLGIGSR CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHCCCCHHHHCCCCC ADWMANLLLFIPLTFVWMGVLSPSGTLLGRLAATLVLIPLATALSLGIEFVQLFFPQRTV HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SQNDVFAETLGGVLGVALWWVAGARFSAWLQGWRAQHSRAALAERIAWTYFAGVLVYNVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLDLTISAVEIFHKWQDGRVNLIPFARLPADPFYAVYEIATDALLWVPLALLWRLDGKRG HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PWRAWGMTLVTAATLEVLQLFVFSRVSDITDLFTAAAGAALGTGIGSRVRGRGAHAEGLT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC RDRGTSWAMRRWAPFVLTALWMAALALVFWFPFDFRTDGAFVRTRLDFVLRVPFEVYYFG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEEC TEYRAITEVLRKTLFFAPLGALLAWGVAVQPWRLRAPLFVLALLLLAAVPAVIEFGQVML CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHC PHKIADTTDWFLAWAGGLAGYALARRFARAPRVVAAPHVSRGEEAHTNPASQPVGWHFVF CHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCEEHHH STAGLALLLWLLGQAAFVPYNVRELLQHDSPVLSALLLAVACYWLAVWPLWLARRRVSAL HHHHHHHHHHHHCCHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLLQLPFGLFVYGLVAFLLLRFAVPEESLHDLVGSPILGWGQWETGVRWIALASVPGAM HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHCCCEEEEEECCCHHH LYLAAQSIRRWRGRTLGAIHFCAVLPVLAIAYWAVVHRAATDNLVELIATPRPLAFAALC HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GALWLLFFAAASVASPQSASMRFGRPIVVALSLPLAALLVHFGLADEIDKYGQRFSALQF HHHHHHHHHHHHCCCCCCCCHHCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LLSADRQNYAAPAYIWLRYAGVHVLVIAGLAFIQWPHFRTARRTHAQGSDVPY HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA