| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is pykA [H]
Identifier: 74316180
GI number: 74316180
Start: 174936
End: 176369
Strand: Direct
Name: pykA [H]
Synonym: Tbd_0162
Alternate gene names: 74316180
Gene position: 174936-176369 (Clockwise)
Preceding gene: 74316179
Following gene: 74316181
Centisome position: 6.01
GC content: 66.18
Gene sequence:
>1434_bases ATGATTCGCAGAACCAAAATCGTCGCCACCCTCGGCCCCGCCTGCTCCGACGCCAAGACGCTCGATCGGATGATGGAAGC CGGCCTGGACGTGGTCCGTCTCAACTTCTCCCACGGCGTGGCGCAGGACCACATCGACCGCGCCGAACTCGTGCGTTCGC TCGCGCGTACGCGCGGTCGCGCGGTCGGCGTCCTCGTCGACCTGCAGGGGCCGAAGATCCGCATCGGCAAATTCAAGGAC AACAAGATCGTCCTCGCCAAGGGCGACAACTTCATCCTCGACGCGGAATGCGCGCTCGGCGACCAGGAGCGCGTCGGCCT CGACTACAAGGAATTGCCGAGCGACGTCGCCCGTGGCGTGACGCTCCTGCTCGACGACGGCCGGATCGAACTCTGGGTCG AAGACGTCAAGGGCAGCGAAATCCACTGCAAGGTCGTGCAGGGCGGCGTGCTCTCGAATAACAAGGGCATCAACCGCAAG GGCGGCGGTCTTTCGGCCGCCGCGCTGACCGAGAAGGACATCGAGGACATCAAGACCGCCGCGGCGCTCAAGGCCGACTA CCTCGCGGTCTCCTTCCCGCGCTCGGGCGCCGACATGCGCCAGGCGCGCGAGTTGCTGCGGGCCGCGGGCGGCAGGAGCC AGCTCGTCGCCAAGATCGAGCGCACTGAAGCGATCGAGAACCTCGAAGAAATCCTCGATGCGTCCGACGCGATCATGGTC GCCCGCGGCGACCTCGGCGTCGAGGTCGGCGACGCTGCGGTGCCGGCGCTGCAGAAGCGCATGATCCGTATGGCGATCGC GCGCAACAAGGTCGTCATCACCGCGACGCAGATGATGGAGTCGATGATCACGAGCCCGATCCCGACCCGCGCCGAAGTCT CCGACGTCGCCAACGCCGTGCTCGACGGCACCGACGCCGTCATGCTCTCGGCCGAGACCGCGGCCGGGCAATACCCGGTC GAAGCCGTGCAGGCGATGGACCGCGTCTGCCTCGAAGCCGAAAAGGAAGCCGAGACGCAGTTCACGCGCGAGCGGCTCGA CCACAGCTTCCTGCGCGCCGACGAGGCGATCGCGATGTCGGCCGTGTTCACCTCGGTGCACCTCAACATCAAGGCCATCG CCGCGCTGACCGAGTCCGGCAATACCTGTCTGTGGATGAGCCGCCTGTCGACGCGCGTGCCGATCTACGCCTTGACACCT CAGGTCGAAACCCGTAGAAAAGTCACTCTCTTCCGCGGTGTCTATCCGATCAACCTCAAGACCGCCACCAAGGAGCGCGA CGTGCTGCTCGCCGAGGCCGAGGAAGAATTGCGGCGGCGCGGCGCCGTGCGCGACGGCGACCTGATCCTGCTGACGATCG GCGAGCCGATCGGCCAGTCGGGCGGCACCAATACGATGAAGATCGTCCGTGTGGGCGCTTCGAAGAAACCCTGA
Upstream 100 bases:
>100_bases CGCGCGCAAGGCTAAGCGCCTTACGGCAAGACGCGAGGGGGAGGCTGAGGCTTCCCCCTCGGGCTTTCCGCCTTCCCTCC CTCAACGCTCCACCACAATA
Downstream 100 bases:
>100_bases ATCTGAAGCACGTTTTTTACCTAGGAGAGTGTAAATGGCCCTGATTTCCCTTCGTCAACTGCTCGACCATGCCGCCGAAA ACGGCTACGGTCTGCCCGCG
Product: pyruvate kinase
Products: NA
Alternate protein names: PK-2 [H]
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MIRRTKIVATLGPACSDAKTLDRMMEAGLDVVRLNFSHGVAQDHIDRAELVRSLARTRGRAVGVLVDLQGPKIRIGKFKD NKIVLAKGDNFILDAECALGDQERVGLDYKELPSDVARGVTLLLDDGRIELWVEDVKGSEIHCKVVQGGVLSNNKGINRK GGGLSAAALTEKDIEDIKTAAALKADYLAVSFPRSGADMRQARELLRAAGGRSQLVAKIERTEAIENLEEILDASDAIMV ARGDLGVEVGDAAVPALQKRMIRMAIARNKVVITATQMMESMITSPIPTRAEVSDVANAVLDGTDAVMLSAETAAGQYPV EAVQAMDRVCLEAEKEAETQFTRERLDHSFLRADEAIAMSAVFTSVHLNIKAIAALTESGNTCLWMSRLSTRVPIYALTP QVETRRKVTLFRGVYPINLKTATKERDVLLAEAEEELRRRGAVRDGDLILLTIGEPIGQSGGTNTMKIVRVGASKKP
Sequences:
>Translated_477_residues MIRRTKIVATLGPACSDAKTLDRMMEAGLDVVRLNFSHGVAQDHIDRAELVRSLARTRGRAVGVLVDLQGPKIRIGKFKD NKIVLAKGDNFILDAECALGDQERVGLDYKELPSDVARGVTLLLDDGRIELWVEDVKGSEIHCKVVQGGVLSNNKGINRK GGGLSAAALTEKDIEDIKTAAALKADYLAVSFPRSGADMRQARELLRAAGGRSQLVAKIERTEAIENLEEILDASDAIMV ARGDLGVEVGDAAVPALQKRMIRMAIARNKVVITATQMMESMITSPIPTRAEVSDVANAVLDGTDAVMLSAETAAGQYPV EAVQAMDRVCLEAEKEAETQFTRERLDHSFLRADEAIAMSAVFTSVHLNIKAIAALTESGNTCLWMSRLSTRVPIYALTP QVETRRKVTLFRGVYPINLKTATKERDVLLAEAEEELRRRGAVRDGDLILLTIGEPIGQSGGTNTMKIVRVGASKKP >Mature_477_residues MIRRTKIVATLGPACSDAKTLDRMMEAGLDVVRLNFSHGVAQDHIDRAELVRSLARTRGRAVGVLVDLQGPKIRIGKFKD NKIVLAKGDNFILDAECALGDQERVGLDYKELPSDVARGVTLLLDDGRIELWVEDVKGSEIHCKVVQGGVLSNNKGINRK GGGLSAAALTEKDIEDIKTAAALKADYLAVSFPRSGADMRQARELLRAAGGRSQLVAKIERTEAIENLEEILDASDAIMV ARGDLGVEVGDAAVPALQKRMIRMAIARNKVVITATQMMESMITSPIPTRAEVSDVANAVLDGTDAVMLSAETAAGQYPV EAVQAMDRVCLEAEKEAETQFTRERLDHSFLRADEAIAMSAVFTSVHLNIKAIAALTESGNTCLWMSRLSTRVPIYALTP QVETRRKVTLFRGVYPINLKTATKERDVLLAEAEEELRRRGAVRDGDLILLTIGEPIGQSGGTNTMKIVRVGASKKP
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=497, Percent_Identity=37.625754527163, Blast_Score=287, Evalue=1e-77, Organism=Homo sapiens, GI33286420, Length=497, Percent_Identity=37.625754527163, Blast_Score=287, Evalue=1e-77, Organism=Homo sapiens, GI33286418, Length=489, Percent_Identity=37.8323108384458, Blast_Score=282, Evalue=4e-76, Organism=Homo sapiens, GI32967597, Length=493, Percent_Identity=35.4969574036511, Blast_Score=265, Evalue=8e-71, Organism=Homo sapiens, GI10835121, Length=489, Percent_Identity=35.9918200408998, Blast_Score=265, Evalue=8e-71, Organism=Homo sapiens, GI310128732, Length=291, Percent_Identity=35.7388316151203, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI310128730, Length=291, Percent_Identity=35.7388316151203, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI310128736, Length=239, Percent_Identity=32.6359832635983, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI310128734, Length=239, Percent_Identity=32.6359832635983, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI310128738, Length=218, Percent_Identity=31.651376146789, Blast_Score=103, Evalue=3e-22, Organism=Escherichia coli, GI1788160, Length=476, Percent_Identity=53.781512605042, Blast_Score=475, Evalue=1e-135, Organism=Escherichia coli, GI1787965, Length=470, Percent_Identity=38.7234042553192, Blast_Score=306, Evalue=1e-84, Organism=Caenorhabditis elegans, GI17544584, Length=486, Percent_Identity=36.6255144032922, Blast_Score=291, Evalue=7e-79, Organism=Caenorhabditis elegans, GI71984413, Length=488, Percent_Identity=34.6311475409836, Blast_Score=256, Evalue=2e-68, Organism=Caenorhabditis elegans, GI17506829, Length=488, Percent_Identity=34.6311475409836, Blast_Score=256, Evalue=2e-68, Organism=Caenorhabditis elegans, GI71984406, Length=488, Percent_Identity=34.6311475409836, Blast_Score=256, Evalue=2e-68, Organism=Caenorhabditis elegans, GI17506831, Length=488, Percent_Identity=34.6311475409836, Blast_Score=256, Evalue=2e-68, Organism=Saccharomyces cerevisiae, GI6324923, Length=485, Percent_Identity=32.7835051546392, Blast_Score=237, Evalue=4e-63, Organism=Saccharomyces cerevisiae, GI6319279, Length=486, Percent_Identity=33.5390946502058, Blast_Score=236, Evalue=7e-63, Organism=Drosophila melanogaster, GI28571814, Length=493, Percent_Identity=36.3083164300203, Blast_Score=273, Evalue=2e-73, Organism=Drosophila melanogaster, GI24648964, Length=493, Percent_Identity=36.3083164300203, Blast_Score=273, Evalue=2e-73, Organism=Drosophila melanogaster, GI24648966, Length=410, Percent_Identity=37.3170731707317, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI24581235, Length=487, Percent_Identity=32.6488706365503, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24646914, Length=271, Percent_Identity=38.7453874538745, Blast_Score=162, Evalue=3e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51705; Mature: 51705
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRTKIVATLGPACSDAKTLDRMMEAGLDVVRLNFSHGVAQDHIDRAELVRSLARTRGR CCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHCCHHHHHHHHHHCCCC AVGVLVDLQGPKIRIGKFKDNKIVLAKGDNFILDAECALGDQERVGLDYKELPSDVARGV EEEEEEECCCCEEEEEEECCCEEEEEECCCEEEECHHCCCCHHHCCCCHHHCCHHHHCCE TLLLDDGRIELWVEDVKGSEIHCKVVQGGVLSNNKGINRKGGGLSAAALTEKDIEDIKTA EEEEECCEEEEEEEECCCCEEEEEEEECCEEECCCCCCCCCCCCEEHHHHHHHHHHHHHH AALKADYLAVSFPRSGADMRQARELLRAAGGRSQLVAKIERTEAIENLEEILDASDAIMV HHHHHCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE ARGDLGVEVGDAAVPALQKRMIRMAIARNKVVITATQMMESMITSPIPTRAEVSDVANAV EECCCCEEECCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHH LDGTDAVMLSAETAAGQYPVEAVQAMDRVCLEAEKEAETQFTRERLDHSFLRADEAIAMS HCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVFTSVHLNIKAIAALTESGNTCLWMSRLSTRVPIYALTPQVETRRKVTLFRGVYPINLK HHHHHHEEEEEEEEEEECCCCEEEEEEHHCCCCCEEEECCCCCCCCEEEEEECEEEEEEE TATKERDVLLAEAEEELRRRGAVRDGDLILLTIGEPIGQSGGTNTMKIVRVGASKKP ECCCCCCEEEHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MIRRTKIVATLGPACSDAKTLDRMMEAGLDVVRLNFSHGVAQDHIDRAELVRSLARTRGR CCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHCCHHHHHHHHHHCCCC AVGVLVDLQGPKIRIGKFKDNKIVLAKGDNFILDAECALGDQERVGLDYKELPSDVARGV EEEEEEECCCCEEEEEEECCCEEEEEECCCEEEECHHCCCCHHHCCCCHHHCCHHHHCCE TLLLDDGRIELWVEDVKGSEIHCKVVQGGVLSNNKGINRKGGGLSAAALTEKDIEDIKTA EEEEECCEEEEEEEECCCCEEEEEEEECCEEECCCCCCCCCCCCEEHHHHHHHHHHHHHH AALKADYLAVSFPRSGADMRQARELLRAAGGRSQLVAKIERTEAIENLEEILDASDAIMV HHHHHCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE ARGDLGVEVGDAAVPALQKRMIRMAIARNKVVITATQMMESMITSPIPTRAEVSDVANAV EECCCCEEECCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHH LDGTDAVMLSAETAAGQYPVEAVQAMDRVCLEAEKEAETQFTRERLDHSFLRADEAIAMS HCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVFTSVHLNIKAIAALTESGNTCLWMSRLSTRVPIYALTPQVETRRKVTLFRGVYPINLK HHHHHHEEEEEEEEEEECCCCEEEEEEHHCCCCCEEEECCCCCCCCEEEEEECEEEEEEE TATKERDVLLAEAEEELRRRGAVRDGDLILLTIGEPIGQSGGTNTMKIVRVGASKKP ECCCCCCEEEHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 1732206; 1859631; 8439398 [H]