| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is cbbA [H]
Identifier: 74316181
GI number: 74316181
Start: 176404
End: 177471
Strand: Direct
Name: cbbA [H]
Synonym: Tbd_0163
Alternate gene names: 74316181
Gene position: 176404-177471 (Clockwise)
Preceding gene: 74316180
Following gene: 74316182
Centisome position: 6.06
GC content: 63.86
Gene sequence:
>1068_bases ATGGCCCTGATTTCCCTTCGTCAACTGCTCGACCATGCCGCCGAAAACGGCTACGGTCTGCCCGCGTTCAACGTCAACAA CATGGAGCAGGTCAAGGCCATCATGGAAGCGGCGGCCGCGGTCGACTCGCCCGTGATCCTGCAGGGTTCGGCCGGTGCGC GTTCCTACGCCGGCGAGCCCTTCCTGCGCCACCTGATCCTTGCCGCGATCGAGATGTACCCACAGATCCCGATCTGCATG CACCAGGACCATGGCGCCTCGCCGAGCATCTGCTTCCGCTCGATCCAGTCGGGATTCTCCTCGGTCATGATGGACGGCTC GCTGAAGGAAGACGGCAAGACCCCCGCCAGCTACGAATACAACGTCGAGACCACCCGCAAGGTCTCGGAACTTGCCCACG CCTGCGGCGTCTCGGTCGAAGGTGAACTCGGCTGCCTGGGCTCGCTCGAGACCGGCAAGGCCGGCGAGGAAGACGGCCAC GGCGCCGAAGGCACGCTCGACCACTCGATGCTCCTGACCGACCCCGACGAGGCCGCCGACTTCGTCTCCAAGACCAGGGT CGACGCGCTCGCGATCGCCATCGGCACCTCGCACGGCGCCTACAAGTTCACGCAGAAGCCCACCGGCAAGGTGCTGCGCA TCGACCGCGTGAAGGAAATCCACGCCCGCATCCCTAACGTGCACCTCGTCATGCACGGCTCGTCGTCGGTGCCCGAAGAC TGGCTCGCGATCATCAACAGCTACGGTGGCGACATGGGCCAGACCTACGGCGTGCCGGTCGAAGAGATCGTCGAAGGCAT CAAGAACGGCGTGCGCAAGGTCAACATCGACACCGACCTGCGCATGGCGTCGACCGGCGCGATCCGCAAGCACCTGGCCG AGAACAAGTCCAACTTCGACCCGCGCAAATTCCTCAAGGAAGCGACCAAGGGCATGAGCGACATCTGCAAGGCCCGCTAC GAAGCCTTCGGCGCCGCCGGCCAGGCCAGCAAGATCAAGAAGGTGTTCAACCTCGAAGAAATGCAGAAGCGCTACGACAA GGGCGAGCTCGACCCCAAGGTCAACTGA
Upstream 100 bases:
>100_bases ATCGGCCAGTCGGGCGGCACCAATACGATGAAGATCGTCCGTGTGGGCGCTTCGAAGAAACCCTGAATCTGAAGCACGTT TTTTACCTAGGAGAGTGTAA
Downstream 100 bases:
>100_bases TCGCCGGCTAGCCGGAATCAGATGCTGGATTGAAATGGGACGCTGCGGCGTCCCATTTTTATGTTCGGCGATTCTGCGAT GTTGAGCGGATCGATTCCGG
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MALISLRQLLDHAAENGYGLPAFNVNNMEQVKAIMEAAAAVDSPVILQGSAGARSYAGEPFLRHLILAAIEMYPQIPICM HQDHGASPSICFRSIQSGFSSVMMDGSLKEDGKTPASYEYNVETTRKVSELAHACGVSVEGELGCLGSLETGKAGEEDGH GAEGTLDHSMLLTDPDEAADFVSKTRVDALAIAIGTSHGAYKFTQKPTGKVLRIDRVKEIHARIPNVHLVMHGSSSVPED WLAIINSYGGDMGQTYGVPVEEIVEGIKNGVRKVNIDTDLRMASTGAIRKHLAENKSNFDPRKFLKEATKGMSDICKARY EAFGAAGQASKIKKVFNLEEMQKRYDKGELDPKVN
Sequences:
>Translated_355_residues MALISLRQLLDHAAENGYGLPAFNVNNMEQVKAIMEAAAAVDSPVILQGSAGARSYAGEPFLRHLILAAIEMYPQIPICM HQDHGASPSICFRSIQSGFSSVMMDGSLKEDGKTPASYEYNVETTRKVSELAHACGVSVEGELGCLGSLETGKAGEEDGH GAEGTLDHSMLLTDPDEAADFVSKTRVDALAIAIGTSHGAYKFTQKPTGKVLRIDRVKEIHARIPNVHLVMHGSSSVPED WLAIINSYGGDMGQTYGVPVEEIVEGIKNGVRKVNIDTDLRMASTGAIRKHLAENKSNFDPRKFLKEATKGMSDICKARY EAFGAAGQASKIKKVFNLEEMQKRYDKGELDPKVN >Mature_354_residues ALISLRQLLDHAAENGYGLPAFNVNNMEQVKAIMEAAAAVDSPVILQGSAGARSYAGEPFLRHLILAAIEMYPQIPICMH QDHGASPSICFRSIQSGFSSVMMDGSLKEDGKTPASYEYNVETTRKVSELAHACGVSVEGELGCLGSLETGKAGEEDGHG AEGTLDHSMLLTDPDEAADFVSKTRVDALAIAIGTSHGAYKFTQKPTGKVLRIDRVKEIHARIPNVHLVMHGSSSVPEDW LAIINSYGGDMGQTYGVPVEEIVEGIKNGVRKVNIDTDLRMASTGAIRKHLAENKSNFDPRKFLKEATKGMSDICKARYE AFGAAGQASKIKKVFNLEEMQKRYDKGELDPKVN
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1789526, Length=330, Percent_Identity=33.6363636363636, Blast_Score=164, Evalue=6e-42, Organism=Escherichia coli, GI87082041, Length=329, Percent_Identity=31.0030395136778, Blast_Score=154, Evalue=6e-39, Organism=Escherichia coli, GI1788072, Length=333, Percent_Identity=27.6276276276276, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1789293, Length=358, Percent_Identity=28.2122905027933, Blast_Score=84, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6322790, Length=372, Percent_Identity=26.0752688172043, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006412 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 38410; Mature: 38279
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00602 ALDOLASE_CLASS_II_1 ; PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALISLRQLLDHAAENGYGLPAFNVNNMEQVKAIMEAAAAVDSPVILQGSAGARSYAGEP CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCH FLRHLILAAIEMYPQIPICMHQDHGASPSICFRSIQSGFSSVMMDGSLKEDGKTPASYEY HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE NVETTRKVSELAHACGVSVEGELGCLGSLETGKAGEEDGHGAEGTLDHSMLLTDPDEAAD CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHH FVSKTRVDALAIAIGTSHGAYKFTQKPTGKVLRIDRVKEIHARIPNVHLVMHGSSSVPED HHHHHHHHHEEEEEECCCCCEEECCCCCCCEEEHHHHHHHHHHCCCEEEEEECCCCCCHH WLAIINSYGGDMGQTYGVPVEEIVEGIKNGVRKVNIDTDLRMASTGAIRKHLAENKSNFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHCCCCCC PRKFLKEATKGMSDICKARYEAFGAAGQASKIKKVFNLEEMQKRYDKGELDPKVN HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ALISLRQLLDHAAENGYGLPAFNVNNMEQVKAIMEAAAAVDSPVILQGSAGARSYAGEP HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCH FLRHLILAAIEMYPQIPICMHQDHGASPSICFRSIQSGFSSVMMDGSLKEDGKTPASYEY HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE NVETTRKVSELAHACGVSVEGELGCLGSLETGKAGEEDGHGAEGTLDHSMLLTDPDEAAD CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHH FVSKTRVDALAIAIGTSHGAYKFTQKPTGKVLRIDRVKEIHARIPNVHLVMHGSSSVPED HHHHHHHHHEEEEEECCCCCEEECCCCCCCEEEHHHHHHHHHHCCCEEEEEECCCCCCHH WLAIINSYGGDMGQTYGVPVEEIVEGIKNGVRKVNIDTDLRMASTGAIRKHLAENKSNFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHCCCCCC PRKFLKEATKGMSDICKARYEAFGAAGQASKIKKVFNLEEMQKRYDKGELDPKVN HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]