Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316072

Identifier: 74316072

GI number: 74316072

Start: 56780

End: 57442

Strand: Reverse

Name: 74316072

Synonym: Tbd_0054

Alternate gene names: NA

Gene position: 57442-56780 (Counterclockwise)

Preceding gene: 74316075

Following gene: 74316071

Centisome position: 1.97

GC content: 64.71

Gene sequence:

>663_bases
ATGCTAGCGAGAGCTAGCTTAACTCTTTCCGCATGCCGGAATTCGACGTCGATGAAACGCCTTTCGCAATTTTTTTTCCG
CGGCCTGATCACCGCCCTGCCCCTCGGGATGACGGTCTATCTGCTCTATGTTTTCCTGAGCTGGATGGAGGCCATCGCGA
TGCAGATGACCGCCCCGCTGATCGGCGAGTTCTACGTCCCCGGCATGGGGCTCGCGCTGGGCATCACCGTCATCGTTCTT
CTCGGCGCGGCGGTCTCGCATCGCGCTGTCGGGCGCTTCCTGTCGCTGGTCGAGCTGCCGTTCACCAACATCCCGGTGAT
CAAGAGCATCTACTCGTCGCTCAAGGATTTCGCCGACTATTTCGCGCCGCGGCGCGACGCCGGGCGGCAACAGATGGTCG
TCGTGCTGACCTTTCCGGGCCAGGAACTCGAGATCGTGGGCCTGGTCACCCGTCAGAGCGTCGACGGATTGCCGGCCGGG
TTCCTGGGCGGTGACCGCGTCGCGGTCTACCTGCCCATGGGCTACATGATCGGCGGCTATACGGTCTTCGTGCCGCGCGC
CTGGGTGCGGCCGATCGAGATGTCGGTCGAGGAAGCCATGCGCGCGTCGCTGTTCGCGTGGATGAGCACGTCGCCCCGCG
GGGGCGCGGCGCCGCCGACCTGA

Upstream 100 bases:

>100_bases
CCGGCGAACAGGGCGGGCAGGGCGAGAGCGATCAGGGCTTGGACTTTCATGCGGGTTCTCCTCGAAAAAAGACGGGGCTG
AGCGGGCTAGCGGCACTGCT

Downstream 100 bases:

>100_bases
AGCCCCCTAACCGCGGAGCCTCCATGCAGATCGAATGTTACGCGCAGCGCCTGCTCAATCCGTTTCGCGGGGTCGTCCAA
GTCATCCGCTACGCTTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MLARASLTLSACRNSTSMKRLSQFFFRGLITALPLGMTVYLLYVFLSWMEAIAMQMTAPLIGEFYVPGMGLALGITVIVL
LGAAVSHRAVGRFLSLVELPFTNIPVIKSIYSSLKDFADYFAPRRDAGRQQMVVVLTFPGQELEIVGLVTRQSVDGLPAG
FLGGDRVAVYLPMGYMIGGYTVFVPRAWVRPIEMSVEEAMRASLFAWMSTSPRGGAAPPT

Sequences:

>Translated_220_residues
MLARASLTLSACRNSTSMKRLSQFFFRGLITALPLGMTVYLLYVFLSWMEAIAMQMTAPLIGEFYVPGMGLALGITVIVL
LGAAVSHRAVGRFLSLVELPFTNIPVIKSIYSSLKDFADYFAPRRDAGRQQMVVVLTFPGQELEIVGLVTRQSVDGLPAG
FLGGDRVAVYLPMGYMIGGYTVFVPRAWVRPIEMSVEEAMRASLFAWMSTSPRGGAAPPT
>Mature_220_residues
MLARASLTLSACRNSTSMKRLSQFFFRGLITALPLGMTVYLLYVFLSWMEAIAMQMTAPLIGEFYVPGMGLALGITVIVL
LGAAVSHRAVGRFLSLVELPFTNIPVIKSIYSSLKDFADYFAPRRDAGRQQMVVVLTFPGQELEIVGLVTRQSVDGLPAG
FLGGDRVAVYLPMGYMIGGYTVFVPRAWVRPIEMSVEEAMRASLFAWMSTSPRGGAAPPT

Specific function: Unknown

COG id: COG2928

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24014; Mature: 24014

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLARASLTLSACRNSTSMKRLSQFFFRGLITALPLGMTVYLLYVFLSWMEAIAMQMTAPL
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGEFYVPGMGLALGITVIVLLGAAVSHRAVGRFLSLVELPFTNIPVIKSIYSSLKDFADY
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
FAPRRDAGRQQMVVVLTFPGQELEIVGLVTRQSVDGLPAGFLGGDRVAVYLPMGYMIGGY
HCCCCCCCCCEEEEEEECCCCCEEEEEEEHHHCCCCCCCCCCCCCEEEEEEECCHHHCCE
TVFVPRAWVRPIEMSVEEAMRASLFAWMSTSPRGGAAPPT
EEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLARASLTLSACRNSTSMKRLSQFFFRGLITALPLGMTVYLLYVFLSWMEAIAMQMTAPL
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGEFYVPGMGLALGITVIVLLGAAVSHRAVGRFLSLVELPFTNIPVIKSIYSSLKDFADY
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
FAPRRDAGRQQMVVVLTFPGQELEIVGLVTRQSVDGLPAGFLGGDRVAVYLPMGYMIGGY
HCCCCCCCCCEEEEEEECCCCCEEEEEEEHHHCCCCCCCCCCCCCEEEEEEECCHHHCCE
TVFVPRAWVRPIEMSVEEAMRASLFAWMSTSPRGGAAPPT
EEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA