Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316071

Identifier: 74316071

GI number: 74316071

Start: 55791

End: 56756

Strand: Reverse

Name: 74316071

Synonym: Tbd_0053

Alternate gene names: NA

Gene position: 56756-55791 (Counterclockwise)

Preceding gene: 74316072

Following gene: 74316067

Centisome position: 1.95

GC content: 69.25

Gene sequence:

>966_bases
ATGCAGATCGAATGTTACGCGCAGCGCCTGCTCAATCCGTTTCGCGGGGTCGTCCAAGTCATCCGCTACGCTTCGGCCGA
AGCCGTGACAACCGACGGCGTCGAGTGGGATATCTACGTCGCCAACGATGCGCTGCTCGAGGGCCTCGGCCGTGCGGGCA
GGCGCGCGCAGATTTCGGACATCCGCTACGGCCACTGGTCCGCACAGACGGGGCTCAAGCGCGGACCGCTCTATCCTTCC
GACGACTTCAAGCGTCTCGAGGAGATGGGCGCCGTGGTGTACGAGCATCTGCTCGCGGTGCATCGCGACGTACCCTTCAA
GTTCCGCGACCGGTTCGAACTGTGGCTGCTCGACCGCGCAGACCGGCCGCTCGCCTTGCTGCATAGCGTCTGCAACGCGA
GCGAGACCGACACCCGGCCGCCGCTCGACTGGCGTGCCGGCATGGCCGCGACCGCCAGTTTTCGCAGTACGGCCGTGGCG
GAGTCGACAGAATCGGCGGCGGCTTGTCTCACCCGCGCCGTCAACGGTCTGGCGAGCGGCGTCGCGCAGTGGTTCCGGCG
CAGCGACGACGGCGCCGCCCTCGGGCTGCACACGCTGCGCGGGGGTGAGCCCCTGCGCGGCCGCGTGCTCGACGCCGACG
CCTTTCCGGCGCTCTTCCTCGCGACGCGCGAGATGGACCCCACGCAGGCGCAGCTCGTCGACGACTACCATGCCTGGCAG
GCGCCCTGGCTATTGCTGCTTGCCGACCTCGACGACGCCACGCGCCACGCCCTCGAAGCGCGCGCCTGCGAGCAGGGCGA
ACTGCTGGAAAAACACTGCCGCCTCTACCCGCGTGTGATCGACCGCCCGGCCCTGCAGGCCGCGCGCGTCGCCGCGGCAC
TCGCGCGCACGACGCCACCCTCGAGCCGGCGCGACGAGATCTTTTCGCTCGATTACCTCGAACTCGGTCTGAGCGCCAGG
GAGTGA

Upstream 100 bases:

>100_bases
TCGAGGAAGCCATGCGCGCGTCGCTGTTCGCGTGGATGAGCACGTCGCCCCGCGGGGGCGCGGCGCCGCCGACCTGAAGC
CCCCTAACCGCGGAGCCTCC

Downstream 100 bases:

>100_bases
AGGCGGGGCGGCGTTTGCTACGGAGAACTGGCCGGCGCTTGCCCGAGCGCTCCGGCCTGTCCGCCCGACATGCGGGCGTA
AAAACGCGGTCGGGGCGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MQIECYAQRLLNPFRGVVQVIRYASAEAVTTDGVEWDIYVANDALLEGLGRAGRRAQISDIRYGHWSAQTGLKRGPLYPS
DDFKRLEEMGAVVYEHLLAVHRDVPFKFRDRFELWLLDRADRPLALLHSVCNASETDTRPPLDWRAGMAATASFRSTAVA
ESTESAAACLTRAVNGLASGVAQWFRRSDDGAALGLHTLRGGEPLRGRVLDADAFPALFLATREMDPTQAQLVDDYHAWQ
APWLLLLADLDDATRHALEARACEQGELLEKHCRLYPRVIDRPALQAARVAAALARTTPPSSRRDEIFSLDYLELGLSAR
E

Sequences:

>Translated_321_residues
MQIECYAQRLLNPFRGVVQVIRYASAEAVTTDGVEWDIYVANDALLEGLGRAGRRAQISDIRYGHWSAQTGLKRGPLYPS
DDFKRLEEMGAVVYEHLLAVHRDVPFKFRDRFELWLLDRADRPLALLHSVCNASETDTRPPLDWRAGMAATASFRSTAVA
ESTESAAACLTRAVNGLASGVAQWFRRSDDGAALGLHTLRGGEPLRGRVLDADAFPALFLATREMDPTQAQLVDDYHAWQ
APWLLLLADLDDATRHALEARACEQGELLEKHCRLYPRVIDRPALQAARVAAALARTTPPSSRRDEIFSLDYLELGLSAR
E
>Mature_321_residues
MQIECYAQRLLNPFRGVVQVIRYASAEAVTTDGVEWDIYVANDALLEGLGRAGRRAQISDIRYGHWSAQTGLKRGPLYPS
DDFKRLEEMGAVVYEHLLAVHRDVPFKFRDRFELWLLDRADRPLALLHSVCNASETDTRPPLDWRAGMAATASFRSTAVA
ESTESAAACLTRAVNGLASGVAQWFRRSDDGAALGLHTLRGGEPLRGRVLDADAFPALFLATREMDPTQAQLVDDYHAWQ
APWLLLLADLDDATRHALEARACEQGELLEKHCRLYPRVIDRPALQAARVAAALARTTPPSSRRDEIFSLDYLELGLSAR
E

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35740; Mature: 35740

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIECYAQRLLNPFRGVVQVIRYASAEAVTTDGVEWDIYVANDALLEGLGRAGRRAQISD
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCHHHHHHHHCCCCCCCCCC
IRYGHWSAQTGLKRGPLYPSDDFKRLEEMGAVVYEHLLAVHRDVPFKFRDRFELWLLDRA
CCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC
DRPLALLHSVCNASETDTRPPLDWRAGMAATASFRSTAVAESTESAAACLTRAVNGLASG
CCHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAQWFRRSDDGAALGLHTLRGGEPLRGRVLDADAFPALFLATREMDPTQAQLVDDYHAWQ
HHHHHHCCCCCCEEEEHHCCCCCCCCCEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHC
APWLLLLADLDDATRHALEARACEQGELLEKHCRLYPRVIDRPALQAARVAAALARTTPP
CCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
SSRRDEIFSLDYLELGLSARE
CCCCCCCEECHHHHHCCCCCC
>Mature Secondary Structure
MQIECYAQRLLNPFRGVVQVIRYASAEAVTTDGVEWDIYVANDALLEGLGRAGRRAQISD
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCHHHHHHHHCCCCCCCCCC
IRYGHWSAQTGLKRGPLYPSDDFKRLEEMGAVVYEHLLAVHRDVPFKFRDRFELWLLDRA
CCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC
DRPLALLHSVCNASETDTRPPLDWRAGMAATASFRSTAVAESTESAAACLTRAVNGLASG
CCHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAQWFRRSDDGAALGLHTLRGGEPLRGRVLDADAFPALFLATREMDPTQAQLVDDYHAWQ
HHHHHHCCCCCCEEEEHHCCCCCCCCCEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHC
APWLLLLADLDDATRHALEARACEQGELLEKHCRLYPRVIDRPALQAARVAAALARTTPP
CCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
SSRRDEIFSLDYLELGLSARE
CCCCCCCEECHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA