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The map label for this gene is yeeY [H]

Identifier: 73538671

GI number: 73538671

Start: 1555145

End: 1556065

Strand: Direct

Name: yeeY [H]

Synonym: Reut_B4846

Alternate gene names: 73538671

Gene position: 1555145-1556065 (Clockwise)

Preceding gene: 73538670

Following gene: 73538673

Centisome position: 57.05

GC content: 65.8

Gene sequence:

>921_bases
ATGAGAATCACGCTCGATGCGCTGCAGGTAGTCGAGTCCATTGCGCGCTGTGGCACGTTCGCACTTGCCGGCAAGGAACT
GCACAAGGCGCCGTCGTCGCTGAGCTATGTCGTGCAGAAACTCGAAAGCGACCTGGGCATCACGGTGTTCGATCGCAGCG
CGCACCGCGTGCGCCTGACGCTGGCAGGCGAGGTCCTGCTGGACGAAGGGCGCCGTTTGCTGCGCGCCGCGAACGACCTC
GAAGAACGCGTCAGGCGCGCCGAGGCCGGCTGGGAGGCCGAACTAAAGATTGCGACCGACGCGCTGGTTCCGTTTGACGC
CATCCTGCCGTTCATCTCGGCATTCCAGGCGGAAAACAGCTATACGCGCCTGCTGTTCTCGCAGGAATTGCCGGGCAACA
ACTGGTTGGCGCTAGCCACCAACAGCGTTGACCTGTTGATTGGCGCGGTCGGAGATCCCCCCGCGGTGCAGGGGCTGTTC
ACGGTGCCCGCCGGCACCGCGAGGTCGATCTTTGTCGTCGCGCCGGGGCACCCGCTCGCGGCAGTGGAGGAGCCCATCGA
CTGCACCGTGCTGTGGCAACACCAGTTCGTGGAAGTCTGGCTGCCGCAGGACAGTGCGCCCGATCCGCTCCACACGCTGG
TGGAAGGCCAGCGACACATCAGCGTGCCCACACTCGATGCGAAAGTGTCCGTGCTCTTGTCCGGCCTTGCATGCGGCTAT
CTGCCGGTGTGCGCCGCGCAGCCGCATATCGACAAAGGGCGGCTCGTCGTGCGGCGGCTGGGCGAGGAGCGCCCGCCACA
AACCTTTCATATCGCCTGGCGCAGCAACGATCCCGGCAGGGCGATCGGCTGGTGGATCGAGCGCAAGGAGGCGCTCGCCA
ACGCCCTGCGCCAAAGCCTTGGGCTTCAGGCGCCAGCCTGA

Upstream 100 bases:

>100_bases
TAACAACCATGCAGCTTTTGTTTAATTCACGCGGTAATATACAAAAGGCGTCTATTCATATAGACGAATTCCCCGAATCT
AACGACCCAAATATTCAACA

Downstream 100 bases:

>100_bases
CTGGCGAAGGCGCGCAGACTGGCCCGGCGACAAGACCGGAACAAGACGGGAAAGCGCGCACCGCCGTCGCCAGCGGCCGC
TAGGCCCTCTCCCGCAGGTC

Product: regulatory protein LysR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MRITLDALQVVESIARCGTFALAGKELHKAPSSLSYVVQKLESDLGITVFDRSAHRVRLTLAGEVLLDEGRRLLRAANDL
EERVRRAEAGWEAELKIATDALVPFDAILPFISAFQAENSYTRLLFSQELPGNNWLALATNSVDLLIGAVGDPPAVQGLF
TVPAGTARSIFVVAPGHPLAAVEEPIDCTVLWQHQFVEVWLPQDSAPDPLHTLVEGQRHISVPTLDAKVSVLLSGLACGY
LPVCAAQPHIDKGRLVVRRLGEERPPQTFHIAWRSNDPGRAIGWWIERKEALANALRQSLGLQAPA

Sequences:

>Translated_306_residues
MRITLDALQVVESIARCGTFALAGKELHKAPSSLSYVVQKLESDLGITVFDRSAHRVRLTLAGEVLLDEGRRLLRAANDL
EERVRRAEAGWEAELKIATDALVPFDAILPFISAFQAENSYTRLLFSQELPGNNWLALATNSVDLLIGAVGDPPAVQGLF
TVPAGTARSIFVVAPGHPLAAVEEPIDCTVLWQHQFVEVWLPQDSAPDPLHTLVEGQRHISVPTLDAKVSVLLSGLACGY
LPVCAAQPHIDKGRLVVRRLGEERPPQTFHIAWRSNDPGRAIGWWIERKEALANALRQSLGLQAPA
>Mature_306_residues
MRITLDALQVVESIARCGTFALAGKELHKAPSSLSYVVQKLESDLGITVFDRSAHRVRLTLAGEVLLDEGRRLLRAANDL
EERVRRAEAGWEAELKIATDALVPFDAILPFISAFQAENSYTRLLFSQELPGNNWLALATNSVDLLIGAVGDPPAVQGLF
TVPAGTARSIFVVAPGHPLAAVEEPIDCTVLWQHQFVEVWLPQDSAPDPLHTLVEGQRHISVPTLDAKVSVLLSGLACGY
LPVCAAQPHIDKGRLVVRRLGEERPPQTFHIAWRSNDPGRAIGWWIERKEALANALRQSLGLQAPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=295, Percent_Identity=36.271186440678, Blast_Score=201, Evalue=4e-53,
Organism=Escherichia coli, GI1789492, Length=296, Percent_Identity=32.7702702702703, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1787949, Length=283, Percent_Identity=30.0353356890459, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1786713, Length=285, Percent_Identity=28.7719298245614, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1786508, Length=290, Percent_Identity=24.4827586206897, Blast_Score=95, Evalue=7e-21,
Organism=Escherichia coli, GI1786448, Length=115, Percent_Identity=33.0434782608696, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33411; Mature: 33411

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITLDALQVVESIARCGTFALAGKELHKAPSSLSYVVQKLESDLGITVFDRSAHRVRLT
CEEEHHHHHHHHHHHHCCHHHCCCHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEE
LAGEVLLDEGRRLLRAANDLEERVRRAEAGWEAELKIATDALVPFDAILPFISAFQAENS
EECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC
YTRLLFSQELPGNNWLALATNSVDLLIGAVGDPPAVQGLFTVPAGTARSIFVVAPGHPLA
CEEEEEECCCCCCCEEEEEECCEEEEEECCCCCHHHCEEEECCCCCCCEEEEEECCCCCH
AVEEPIDCTVLWQHQFVEVWLPQDSAPDPLHTLVEGQRHISVPTLDAKVSVLLSGLACGY
HHCCCCCEEEEEEEEEEEEEECCCCCCCHHHHHHCCCCEECCCCCHHHHHHHHHHHHHCC
LPVCAAQPHIDKGRLVVRRLGEERPPQTFHIAWRSNDPGRAIGWWIERKEALANALRQSL
HHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
GLQAPA
CCCCCC
>Mature Secondary Structure
MRITLDALQVVESIARCGTFALAGKELHKAPSSLSYVVQKLESDLGITVFDRSAHRVRLT
CEEEHHHHHHHHHHHHCCHHHCCCHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEE
LAGEVLLDEGRRLLRAANDLEERVRRAEAGWEAELKIATDALVPFDAILPFISAFQAENS
EECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC
YTRLLFSQELPGNNWLALATNSVDLLIGAVGDPPAVQGLFTVPAGTARSIFVVAPGHPLA
CEEEEEECCCCCCCEEEEEECCEEEEEECCCCCHHHCEEEECCCCCCCEEEEEECCCCCH
AVEEPIDCTVLWQHQFVEVWLPQDSAPDPLHTLVEGQRHISVPTLDAKVSVLLSGLACGY
HHCCCCCEEEEEEEEEEEEEECCCCCCCHHHHHHCCCCEECCCCCHHHHHHHHHHHHHCC
LPVCAAQPHIDKGRLVVRRLGEERPPQTFHIAWRSNDPGRAIGWWIERKEALANALRQSL
HHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
GLQAPA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]