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The map label for this gene is ycaC [H]

Identifier: 73538673

GI number: 73538673

Start: 1557011

End: 1557697

Strand: Direct

Name: ycaC [H]

Synonym: Reut_B4848

Alternate gene names: 73538673

Gene position: 1557011-1557697 (Clockwise)

Preceding gene: 73538671

Following gene: 73538674

Centisome position: 57.11

GC content: 60.55

Gene sequence:

>687_bases
GTGAGCAATCCGAAGCTAGAAGTCCTGACTCCGCAGAATTGCCAACTGATCTTCATCGACCATCAGCCGCAGATGGCATT
CGGTGTCCAGTCGATCGACCGCCAAGTCCTGAAGAACAATGTGATCGGGCTCGCCAAGGCCGCGAAGATCTTCAATATCC
CGACCACGATCACCACCGTGGAAACCGAAAGCTTCTCGGGCTTTACGTATCCCGAATTGCTCGACGTGTTTCCGAGCCAC
AAGCTGCTGGAACGCACGTCGATGAATTCCTGGGACGACCAGAAGGTGCGCGACGCGCTGGCTGCTGCGGGCCGCAAGAA
GGTCGTGGTGTCGGGGCTGTGGACGGAAGTCTGCAACAACACGTTCGCGCTCAGCGCGATGCACGACGCCGACTACGAGA
TCTACATGGTGGCCGATGCGTCCGGCGGCACGTCCAAAGAGGCGCATGACTATGCCATGCACCGCATGATCCAGGCCGGC
GTGGTGCCCGTGACCTGGCAGCAGGTGCTGCTTGAATGGCAGCGCGACTGGGCCCACCGCGATACCTATGATGCGGTCAT
GGCGCTTGTCAAGGAGCATTCGGGCGCCTATGGCATGGGCGTCGACTACGCGTACACGATGGTGCACAAGGCGAAGCAGC
GTACGTCAACGCAGCACGAGGCCATTCCGGCAGTCCCGGCACGCTGA

Upstream 100 bases:

>100_bases
TGCGGCCATCGCCGCATGATAATTTGTCCCCCGCCGCCATGCCGTCGCGCCCCATGCGACAGCGAAGGTGTGGCGTCTTT
CCCGCCCCAAGGAGAAAACC

Downstream 100 bases:

>100_bases
GCTCACTGACACATTGACGTGAGTGGATCGCGGGCGCAGCGGCAACCGCCGCCGCGCCCGCCATAAGCCGTCACCTTGCC
ATGCCAACGCCTACAGGAGT

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSNPKLEVLTPQNCQLIFIDHQPQMAFGVQSIDRQVLKNNVIGLAKAAKIFNIPTTITTVETESFSGFTYPELLDVFPSH
KLLERTSMNSWDDQKVRDALAAAGRKKVVVSGLWTEVCNNTFALSAMHDADYEIYMVADASGGTSKEAHDYAMHRMIQAG
VVPVTWQQVLLEWQRDWAHRDTYDAVMALVKEHSGAYGMGVDYAYTMVHKAKQRTSTQHEAIPAVPAR

Sequences:

>Translated_228_residues
MSNPKLEVLTPQNCQLIFIDHQPQMAFGVQSIDRQVLKNNVIGLAKAAKIFNIPTTITTVETESFSGFTYPELLDVFPSH
KLLERTSMNSWDDQKVRDALAAAGRKKVVVSGLWTEVCNNTFALSAMHDADYEIYMVADASGGTSKEAHDYAMHRMIQAG
VVPVTWQQVLLEWQRDWAHRDTYDAVMALVKEHSGAYGMGVDYAYTMVHKAKQRTSTQHEAIPAVPAR
>Mature_227_residues
SNPKLEVLTPQNCQLIFIDHQPQMAFGVQSIDRQVLKNNVIGLAKAAKIFNIPTTITTVETESFSGFTYPELLDVFPSHK
LLERTSMNSWDDQKVRDALAAAGRKKVVVSGLWTEVCNNTFALSAMHDADYEIYMVADASGGTSKEAHDYAMHRMIQAGV
VPVTWQQVLLEWQRDWAHRDTYDAVMALVKEHSGAYGMGVDYAYTMVHKAKQRTSTQHEAIPAVPAR

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=198, Percent_Identity=32.8282828282828, Blast_Score=108, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 25530; Mature: 25399

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPKLEVLTPQNCQLIFIDHQPQMAFGVQSIDRQVLKNNVIGLAKAAKIFNIPTTITTV
CCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCEEEEE
ETESFSGFTYPELLDVFPSHKLLERTSMNSWDDQKVRDALAAAGRKKVVVSGLWTEVCNN
ECCCCCCCCHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHCCC
TFALSAMHDADYEIYMVADASGGTSKEAHDYAMHRMIQAGVVPVTWQQVLLEWQRDWAHR
EEEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
DTYDAVMALVKEHSGAYGMGVDYAYTMVHKAKQRTSTQHEAIPAVPAR
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCC
>Mature Secondary Structure 
SNPKLEVLTPQNCQLIFIDHQPQMAFGVQSIDRQVLKNNVIGLAKAAKIFNIPTTITTV
CCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCEEEEE
ETESFSGFTYPELLDVFPSHKLLERTSMNSWDDQKVRDALAAAGRKKVVVSGLWTEVCNN
ECCCCCCCCHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHCCC
TFALSAMHDADYEIYMVADASGGTSKEAHDYAMHRMIQAGVVPVTWQQVLLEWQRDWAHR
EEEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
DTYDAVMALVKEHSGAYGMGVDYAYTMVHKAKQRTSTQHEAIPAVPAR
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]