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The map label for this gene is ccmB [H]

Identifier: 73538592

GI number: 73538592

Start: 1467622

End: 1468290

Strand: Direct

Name: ccmB [H]

Synonym: Reut_B4767

Alternate gene names: 73538592

Gene position: 1467622-1468290 (Clockwise)

Preceding gene: 73538591

Following gene: 73538593

Centisome position: 53.83

GC content: 71.3

Gene sequence:

>669_bases
ATGCTCGCAACCCTTGGCGCCATCGTCATGCACGACCTGTCGCTCGCCTGGCGGCGGCGCGGCAGCCTGCTCGGCAGCGT
GGTGTTCTTCGTCATCGCCGCGAGCCTGTTCCCGCTTGCGATCGGCCCCGAGCCGCAGCAACTGCGCGCGCTCGCGCCGG
GCATCCTGTGGGTGGCGGCGCTGCTCGCATCGATGTTGTCGCTGTCGCGGCTGTTCGCTCAGGAGTACGCCGATGGCAGC
CTCGACCAACTGCTGCTTTCGCCGCAACCGCTGGCCTTGCTGGTGCTGGGGAAGATCTGCGCGCACTGGCTGACCAGCGG
GCTGCCGTTGCTGCTGCTCACGCCGTTGCTGGCGCAGCAGTACAGCCTGCCCGCCGGGTCCGCGCTGCTGCTGTCGGCAT
CGCTGCTGGTCGGCACGCCGGCGCTGAGCCTGATTGGCGCGGTCGGCGCCGCGCTAACGCTGGGCGTGCGCGGCGGTGCG
GTGCTGCTGTGCGTCCTGGTGCTGCCGCTGTGCGTGCCGGTGCTGGTGTTCGGCGCCAGCGCGGGCGTCGCGGCCGACGC
CGGGCTCGATGTGATGCCGCAATTCTCGCTGCTGGGCGCATGCCTGGCGCTGTCGCTGTTCCTGTGCCCGCTCGCGACCG
CGGCGGGTCTGCGCATCGCCATGGAGTAG

Upstream 100 bases:

>100_bases
GGCGGCATGGCGGTGATCGCCACGCACCGGCTGTTGCCCGGCGGCGGGGAAGTACTGCAACTTGGCGGCGCGCATGCGCT
GCCCCCCGCCTGATCGCGCC

Downstream 100 bases:

>100_bases
ACATGGGCCAACCGCTGCACCCCACCCACGCGGTCGCCGACCGGCCTGGCATGCGGCGATCGCGCTGGCTTGCGTTCGCC
GCGCCGGTGCGCTTCTATCC

Product: cytochrome c-type biogenesis protein CcmB

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmB [H]

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MLATLGAIVMHDLSLAWRRRGSLLGSVVFFVIAASLFPLAIGPEPQQLRALAPGILWVAALLASMLSLSRLFAQEYADGS
LDQLLLSPQPLALLVLGKICAHWLTSGLPLLLLTPLLAQQYSLPAGSALLLSASLLVGTPALSLIGAVGAALTLGVRGGA
VLLCVLVLPLCVPVLVFGASAGVAADAGLDVMPQFSLLGACLALSLFLCPLATAAGLRIAME

Sequences:

>Translated_222_residues
MLATLGAIVMHDLSLAWRRRGSLLGSVVFFVIAASLFPLAIGPEPQQLRALAPGILWVAALLASMLSLSRLFAQEYADGS
LDQLLLSPQPLALLVLGKICAHWLTSGLPLLLLTPLLAQQYSLPAGSALLLSASLLVGTPALSLIGAVGAALTLGVRGGA
VLLCVLVLPLCVPVLVFGASAGVAADAGLDVMPQFSLLGACLALSLFLCPLATAAGLRIAME
>Mature_222_residues
MLATLGAIVMHDLSLAWRRRGSLLGSVVFFVIAASLFPLAIGPEPQQLRALAPGILWVAALLASMLSLSRLFAQEYADGS
LDQLLLSPQPLALLVLGKICAHWLTSGLPLLLLTPLLAQQYSLPAGSALLLSASLLVGTPALSLIGAVGAALTLGVRGGA
VLLCVLVLPLCVPVLVFGASAGVAADAGLDVMPQFSLLGACLALSLFLCPLATAAGLRIAME

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG2386

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmB/CycW/HelB family [H]

Homologues:

Organism=Escherichia coli, GI1788528, Length=211, Percent_Identity=48.3412322274881, Blast_Score=142, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003544 [H]

Pfam domain/function: PF03379 CcmB [H]

EC number: NA

Molecular weight: Translated: 22679; Mature: 22679

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLATLGAIVMHDLSLAWRRRGSLLGSVVFFVIAASLFPLAIGPEPQQLRALAPGILWVAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LLASMLSLSRLFAQEYADGSLDQLLLSPQPLALLVLGKICAHWLTSGLPLLLLTPLLAQQ
HHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YSLPAGSALLLSASLLVGTPALSLIGAVGAALTLGVRGGAVLLCVLVLPLCVPVLVFGAS
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
AGVAADAGLDVMPQFSLLGACLALSLFLCPLATAAGLRIAME
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECC
>Mature Secondary Structure
MLATLGAIVMHDLSLAWRRRGSLLGSVVFFVIAASLFPLAIGPEPQQLRALAPGILWVAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LLASMLSLSRLFAQEYADGSLDQLLLSPQPLALLVLGKICAHWLTSGLPLLLLTPLLAQQ
HHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YSLPAGSALLLSASLLVGTPALSLIGAVGAALTLGVRGGAVLLCVLVLPLCVPVLVFGAS
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
AGVAADAGLDVMPQFSLLGACLALSLFLCPLATAAGLRIAME
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]