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The map label for this gene is ccmC [H]

Identifier: 73538593

GI number: 73538593

Start: 1468293

End: 1469084

Strand: Direct

Name: ccmC [H]

Synonym: Reut_B4768

Alternate gene names: 73538593

Gene position: 1468293-1469084 (Clockwise)

Preceding gene: 73538592

Following gene: 73538594

Centisome position: 53.86

GC content: 68.43

Gene sequence:

>792_bases
ATGGGCCAACCGCTGCACCCCACCCACGCGGTCGCCGACCGGCCTGGCATGCGGCGATCGCGCTGGCTTGCGTTCGCCGC
GCCGGTGCGCTTCTATCCGCTCGCGGGCAGGCTCGCACCATGGTTCTTTGCCGCCGCCGCGCTGTTGCTCGTGGGCGGAC
TGTGGATCGGCTTCGTCGTGGCGCCCACCGATGCGCAGCAGGGCGAGGTCTACCGCATCATCTTCATCCACGTGCCGGCC
GCATGGATGTCGATGTTCATCTACTTGGTCATGGCCGGCTATTGCGCGCTGGCGCTGGTGCTGCGCACGCGCCTGTCGTC
CATGATGGCCTCGGCGCTGGCGCCGACCGGCGCGCTGTTCACCGCGATTGCGCTGTGGACCGGCGCGCTGTGGGGAAAGC
CGACCTGGGGCACGTGGTGGGTCTGGGATGCGCGGCTGACGTCGGAGCTGATCCTGCTGTTTCTGTACCTGGGCTTCATC
GCGCTGGAGGCCGCCATCGACGAGACCCGGCGGGCCGAGCGCGCTTGCGGCGTGCTCGCGCTGGTCGGCATGGCGAACGT
TCCGGTGATCTATTTTTCCGTGCAATGGTGGAACACGCTGCACCAGGGCGCGTCGATCAGCCTGACCGCAGCGCCTTCGA
TGGCCGCGACCATGCTGGCCGGCATGCTGGTGATGACGCTCGCGTGCTGGATGTACACGATCGCCGTGGCGCTGGTGCGC
GTGCGTTGCATCCTGCGCGAGCGCGGCGAAGCCGGCACGCTGCCGGCCGAACTTCGGAAGACTGCACCATGA

Upstream 100 bases:

>100_bases
TGATGCCGCAATTCTCGCTGCTGGGCGCATGCCTGGCGCTGTCGCTGTTCCTGTGCCCGCTCGCGACCGCGGCGGGTCTG
CGCATCGCCATGGAGTAGAC

Downstream 100 bases:

>100_bases
GCGAATTCACGTTGTCTTCGCTGACCGGCCACGCAGGCTATATTGCCGGCGCATTCGGCGTGGCATTCGCGCTGATCGGC
GTGGAACTTGTCCTGCTGGC

Product: cytochrome c-type biogenesis protein CcmC

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MGQPLHPTHAVADRPGMRRSRWLAFAAPVRFYPLAGRLAPWFFAAAALLLVGGLWIGFVVAPTDAQQGEVYRIIFIHVPA
AWMSMFIYLVMAGYCALALVLRTRLSSMMASALAPTGALFTAIALWTGALWGKPTWGTWWVWDARLTSELILLFLYLGFI
ALEAAIDETRRAERACGVLALVGMANVPVIYFSVQWWNTLHQGASISLTAAPSMAATMLAGMLVMTLACWMYTIAVALVR
VRCILRERGEAGTLPAELRKTAP

Sequences:

>Translated_263_residues
MGQPLHPTHAVADRPGMRRSRWLAFAAPVRFYPLAGRLAPWFFAAAALLLVGGLWIGFVVAPTDAQQGEVYRIIFIHVPA
AWMSMFIYLVMAGYCALALVLRTRLSSMMASALAPTGALFTAIALWTGALWGKPTWGTWWVWDARLTSELILLFLYLGFI
ALEAAIDETRRAERACGVLALVGMANVPVIYFSVQWWNTLHQGASISLTAAPSMAATMLAGMLVMTLACWMYTIAVALVR
VRCILRERGEAGTLPAELRKTAP
>Mature_262_residues
GQPLHPTHAVADRPGMRRSRWLAFAAPVRFYPLAGRLAPWFFAAAALLLVGGLWIGFVVAPTDAQQGEVYRIIFIHVPAA
WMSMFIYLVMAGYCALALVLRTRLSSMMASALAPTGALFTAIALWTGALWGKPTWGTWWVWDARLTSELILLFLYLGFIA
LEAAIDETRRAERACGVLALVGMANVPVIYFSVQWWNTLHQGASISLTAAPSMAATMLAGMLVMTLACWMYTIAVALVRV
RCILRERGEAGTLPAELRKTAP

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=182, Percent_Identity=54.9450549450549, Blast_Score=194, Evalue=5e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 28844; Mature: 28712

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQPLHPTHAVADRPGMRRSRWLAFAAPVRFYPLAGRLAPWFFAAAALLLVGGLWIGFVV
CCCCCCCCHHHHCCCCCCHHHHHHEECCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHEE
APTDAQQGEVYRIIFIHVPAAWMSMFIYLVMAGYCALALVLRTRLSSMMASALAPTGALF
CCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
TAIALWTGALWGKPTWGTWWVWDARLTSELILLFLYLGFIALEAAIDETRRAERACGVLA
HHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVGMANVPVIYFSVQWWNTLHQGASISLTAAPSMAATMLAGMLVMTLACWMYTIAVALVR
HHHHCCCCEEEEEEHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRCILRERGEAGTLPAELRKTAP
HHHHHHHCCCCCCCHHHHHCCCC
>Mature Secondary Structure 
GQPLHPTHAVADRPGMRRSRWLAFAAPVRFYPLAGRLAPWFFAAAALLLVGGLWIGFVV
CCCCCCCHHHHCCCCCCHHHHHHEECCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHEE
APTDAQQGEVYRIIFIHVPAAWMSMFIYLVMAGYCALALVLRTRLSSMMASALAPTGALF
CCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
TAIALWTGALWGKPTWGTWWVWDARLTSELILLFLYLGFIALEAAIDETRRAERACGVLA
HHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVGMANVPVIYFSVQWWNTLHQGASISLTAAPSMAATMLAGMLVMTLACWMYTIAVALVR
HHHHCCCCEEEEEEHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRCILRERGEAGTLPAELRKTAP
HHHHHHHCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]