| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
Click here to switch to the map view.
The map label for this gene is phnJ [H]
Identifier: 73538019
GI number: 73538019
Start: 830602
End: 831483
Strand: Direct
Name: phnJ [H]
Synonym: Reut_B4189
Alternate gene names: 73538019
Gene position: 830602-831483 (Clockwise)
Preceding gene: 73538018
Following gene: 73538020
Centisome position: 30.47
GC content: 64.4
Gene sequence:
>882_bases ATGAGTCAGACCAACGCCACCGTCGCCCGCGACGACCACTACAACTTTGGCTACCTGGACGAATCAACCAAGCGCATGCT GCGCCGTGCGCTGCTGAAGGCCGTGGCGATTCCCGGCTACCAGGTCCCGTTCGGCAGCCGCGAAATGCCGCTGCCGTATG GCTGGGGCACGGGCGGCATCCAGGTGACGGCCGCCATCATCGGCACGCAGGACGTGCTCAAGGTGATCGACCAGGGTTCG GACGACACCACCAACGCCATCAACATCCGCCGCTTCTTCGGCCGCGTGACCGGCGTCAAGACGACCGAGCGTACCGCTGA AGCGAGCATCATTCAGACGCGCCACCGCATTCCCGAGTCGCCGCTGCGCGCCGGGCAGGTCATGGTGTTCCAGGTGCCGA TTCCCGAACCGCTGCGTTGGCTGGAGCCTAGCGAGCGCGAGACGCGCACCATGCACGCGCTGGCCGAATATGGCTCGATG CACGTCAAGCTCTACGAAGACATCGCCCATCACGGCCATATCGCCACGACCTACGACTATCCGGTGATCGTCAACCAGCG CTACATGATGCGTCCGTCGCCGATCCCGAAGTTCGACAACCCGAAGCTCGACCGCAGCCCCGCGCTGATGCTGTTCGGCG CCGGGCGCGAGAAGCGCGTCTATGCGGTGCCGCCTTACACCTCGGTGAAGAGCCTCGATTTCGTCGACCATCCGTTCACC GTCGAGACATGGAGCAGCTGCTGCGCCCAGTGCGGCTCGACCGACAGCTTTCTTGACGAGATCATTACCGATGATGCCGG CACGCGCATGTTCGTGTGCTCCGACACGGAATACTGCGGCGACCGCGTTGCCGCGCAGCGGGCCGAAGGAGCCGCACAAT GA
Upstream 100 bases:
>100_bases AACTGCTGCGCCGCCTGCGCACCGAGCAGGAAGCCGCGGGTACGGAAGCTGCTCCTGCCGCCGCGGTATCGAGTATCCAG CCACAAGAGGAGACGCTGGC
Downstream 100 bases:
>100_bases GCGCCACCCCGCTGCTTTCCGTCCGCAACCTCACGCGCACCTGGGACGGCGTGCATGGCTGCCATGATGTGAGCTTCGAC CTCTATCCCGGCGAAGTACT
Product: phosphonate metabolism PhnJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSQTNATVARDDHYNFGYLDESTKRMLRRALLKAVAIPGYQVPFGSREMPLPYGWGTGGIQVTAAIIGTQDVLKVIDQGS DDTTNAINIRRFFGRVTGVKTTERTAEASIIQTRHRIPESPLRAGQVMVFQVPIPEPLRWLEPSERETRTMHALAEYGSM HVKLYEDIAHHGHIATTYDYPVIVNQRYMMRPSPIPKFDNPKLDRSPALMLFGAGREKRVYAVPPYTSVKSLDFVDHPFT VETWSSCCAQCGSTDSFLDEIITDDAGTRMFVCSDTEYCGDRVAAQRAEGAAQ
Sequences:
>Translated_293_residues MSQTNATVARDDHYNFGYLDESTKRMLRRALLKAVAIPGYQVPFGSREMPLPYGWGTGGIQVTAAIIGTQDVLKVIDQGS DDTTNAINIRRFFGRVTGVKTTERTAEASIIQTRHRIPESPLRAGQVMVFQVPIPEPLRWLEPSERETRTMHALAEYGSM HVKLYEDIAHHGHIATTYDYPVIVNQRYMMRPSPIPKFDNPKLDRSPALMLFGAGREKRVYAVPPYTSVKSLDFVDHPFT VETWSSCCAQCGSTDSFLDEIITDDAGTRMFVCSDTEYCGDRVAAQRAEGAAQ >Mature_292_residues SQTNATVARDDHYNFGYLDESTKRMLRRALLKAVAIPGYQVPFGSREMPLPYGWGTGGIQVTAAIIGTQDVLKVIDQGSD DTTNAINIRRFFGRVTGVKTTERTAEASIIQTRHRIPESPLRAGQVMVFQVPIPEPLRWLEPSERETRTMHALAEYGSMH VKLYEDIAHHGHIATTYDYPVIVNQRYMMRPSPIPKFDNPKLDRSPALMLFGAGREKRVYAVPPYTSVKSLDFVDHPFTV ETWSSCCAQCGSTDSFLDEIITDDAGTRMFVCSDTEYCGDRVAAQRAEGAAQ
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3627
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnJ family [H]
Homologues:
Organism=Escherichia coli, GI1790536, Length=273, Percent_Identity=74.3589743589744, Blast_Score=442, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010306 [H]
Pfam domain/function: PF06007 PhnJ [H]
EC number: NA
Molecular weight: Translated: 32786; Mature: 32654
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTNATVARDDHYNFGYLDESTKRMLRRALLKAVAIPGYQVPFGSREMPLPYGWGTGGI CCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCE QVTAAIIGTQDVLKVIDQGSDDTTNAINIRRFFGRVTGVKTTERTAEASIIQTRHRIPES EEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC PLRAGQVMVFQVPIPEPLRWLEPSERETRTMHALAEYGSMHVKLYEDIAHHGHIATTYDY CCCCCCEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHCCEEEEEHHHHHHCCCEEEEECC PVIVNQRYMMRPSPIPKFDNPKLDRSPALMLFGAGREKRVYAVPPYTSVKSLDFVDHPFT CEEECCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCC VETWSSCCAQCGSTDSFLDEIITDDAGTRMFVCSDTEYCGDRVAAQRAEGAAQ HHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure SQTNATVARDDHYNFGYLDESTKRMLRRALLKAVAIPGYQVPFGSREMPLPYGWGTGGI CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCE QVTAAIIGTQDVLKVIDQGSDDTTNAINIRRFFGRVTGVKTTERTAEASIIQTRHRIPES EEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC PLRAGQVMVFQVPIPEPLRWLEPSERETRTMHALAEYGSMHVKLYEDIAHHGHIATTYDY CCCCCCEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHCCEEEEEHHHHHHCCCEEEEECC PVIVNQRYMMRPSPIPKFDNPKLDRSPALMLFGAGREKRVYAVPPYTSVKSLDFVDHPFT CEEECCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCC VETWSSCCAQCGSTDSFLDEIITDDAGTRMFVCSDTEYCGDRVAAQRAEGAAQ HHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]