| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is cstA [H]
Identifier: 73543099
GI number: 73543099
Start: 3748279
End: 3750351
Strand: Reverse
Name: cstA [H]
Synonym: Reut_A3417
Alternate gene names: 73543099
Gene position: 3750351-3748279 (Counterclockwise)
Preceding gene: 73543102
Following gene: 73543098
Centisome position: 98.52
GC content: 65.94
Gene sequence:
>2073_bases ATGAATCGCATCGGAGAACACCTCGTGTGGCTGGCCGTCGCCATCTTGGGCGCGTTTGCCTTCGGCACGGTCGCGCTCGC GCGCGGCGAAGCCGTCAGCGCGCTATGGATCGTGGTTGCCGCGCTCTGCATCTACCTGATCGCCTACCGCTACTACAGCC GCTTCATTGCCGACAAGGTGATGCAGCTCGACCCGAAACGCATGACGCCGGCCTGGCGCCATAACGACGGGCTCGACTAC GTGCCGACCAACAAGGCAGTGCTGTTCGGCCACCACTTCGCGGCGATTGCCGGCGCCGGCCCGCTGGTCGGCCCCGTGCT GGCCGCGCAGATGGGCTATATGCCGGGCATGCTTTGGATCCTGGCAGGCGTGGTGTTCGCCGGCGCGGTCCAGGATTTCA TGATCCTGTTCATCTCCACGCGCCGCGACGGCCGTTCGCTGGGCGACCTGGTCAAGTCCGAGATGGGCACGGTACCGGGC ATGATCGCGCTGTTCGGCTGCTTCATGATCATGATCATCATCCTGGCGGTGCTGGCGCTGATCGTGGTGAAGGCGCTGGC CGGCTCCCCGTGGGGTACGTTCACCGTCGCTGTGACCATCCCCATCGCGCTGTTCATGGGCATCTACACGCGCTATATCC GCCCGGGCCGCATCGGTGAGGTGTCGGTGATCGGCTTCGTGCTGCTGATGCTGGCCATCCTCGGCGGGCAGTACGTGCAC GAAAGCGCGGTGCTGGCGCCGCTGTTCACATACGACGGCAAGGCACTGACCTGGATGCTGATCATCTACGGCTTCATCGC CGCCGTGCTGCCGGTGTGGCTGCTGCTGGCCCCGCGCGACTACCTGTCGACCTTCCTGAAGATCGGCACCATCATCGCGC TGGCCATCGGCATCCTGATCGTCGCGCCGGAACTGAAGATGCCAGCCTTCACGCAGTTCGCCCAGGGCGGCGGTCCGGTG TGGTCGGGCAACCTGTTCCCGTTCCTCTTCATCACCATCGCGTGTGGCGCGGTATCGGGCTTCCATGCGCTGATCTCGTC GGGCACCACGCCCAAGCTGCTGGAAAACGAATCGCACGCGCGCTTCATCGGCTACGGCGCGATGCTGGCCGAGTCGTTCG TCGCCATCATGGCGCTGGTGGCCGCTTCGGTGATCGAGCCGGGCGTGTACTTCGCGATGAACAGCCCGAGCGCGGTGATC GGCACCTCGCCGGAAGCCGTGGCGCAAGCCGTGTCGACCTGGGGCTTTGTGATCACGCCTGATGTGCTGATCCAGACCGC CAAGGACGTCGGCGAGAACACCATCATCTCGCGCGCCGGCGGCGCGCCGACGCTGGCCGTGGGCATCGCCCACATCCTGC ACCAGGTGGTGGGCGGCCAAGCCATGATGGCGTTCTGGTACCACTTCGCGATCCTGTTCGAGGCGCTGTTCATCCTGACC GCCGTCGACGCAGGCACCCGCGCCGGCCGCTTCATGCTGCAGGACCTGCTGGGCAGCTTCGTGCCGTCGCTCAAGCGTAC CGACTCGCTGCCGGCCAACCTGATCGCTACCGCGCTGACCGTGGCGGCCTGGGGCTACTTCCTGTACCAGGGCGTGGTGG ATCCGCTGGGCGGCATCAACACGCTGTGGCCGCTGTTCGGTATCTCCAACCAAATGCTGGCCGCCGTGGCGCTGGTGCTG GGCACCTGCGTGCTGGTCAAGATGAAGCGCGGCCAGTACGCCTGGGTCACGTTGGTGCCGACCGTCTGGCTGCTGGTCTG CACGCTGACCGCCGGCTGGCAGAAGCTGTTCGACGCCGATCCGAAGGTCAGTTTCCTGACCCACGCCAGCAAGTTCAGCG CCGCCATTGCCGAAGGCAAGGTGCTGGCCCCGGCCAAGAGCCTGGAGCAGATGCAGCGCATCGTCTTCAATGACTACCTG GACGCCGGCCTGTGCGCGCTGTTCATGTTCGTGGTGCTGTCGATCGTGGCCTACGGCTTCAAGACCGCCATGCAGGCACG CGCCGTGAACCGCCCCACCGACAAGGAAACGCCGTTCGAGCCCCTGCCGGCGGCCGCCTCGGCGCAGTCCTGA
Upstream 100 bases:
>100_bases GTCCGTGCGCCCGCCGGCACGCAGTTTGCTGCCATCCCTTGCCGGCCTCCGCCATTCGACGCCGCAGGCTTTCGATACCC GGTCTGAGGAGACCTTCACT
Downstream 100 bases:
>100_bases TACCGTATTGGCACAAGGAGCTGGCCATGCTGGAACAATTGGGAACAATGGGCCGCTATCTCGGGCAGTCTCTGCGGCTG ATGGTCGGTCTGCCCGACTA
Product: carbon starvation protein CstA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 690; Mature: 690
Protein sequence:
>690_residues MNRIGEHLVWLAVAILGAFAFGTVALARGEAVSALWIVVAALCIYLIAYRYYSRFIADKVMQLDPKRMTPAWRHNDGLDY VPTNKAVLFGHHFAAIAGAGPLVGPVLAAQMGYMPGMLWILAGVVFAGAVQDFMILFISTRRDGRSLGDLVKSEMGTVPG MIALFGCFMIMIIILAVLALIVVKALAGSPWGTFTVAVTIPIALFMGIYTRYIRPGRIGEVSVIGFVLLMLAILGGQYVH ESAVLAPLFTYDGKALTWMLIIYGFIAAVLPVWLLLAPRDYLSTFLKIGTIIALAIGILIVAPELKMPAFTQFAQGGGPV WSGNLFPFLFITIACGAVSGFHALISSGTTPKLLENESHARFIGYGAMLAESFVAIMALVAASVIEPGVYFAMNSPSAVI GTSPEAVAQAVSTWGFVITPDVLIQTAKDVGENTIISRAGGAPTLAVGIAHILHQVVGGQAMMAFWYHFAILFEALFILT AVDAGTRAGRFMLQDLLGSFVPSLKRTDSLPANLIATALTVAAWGYFLYQGVVDPLGGINTLWPLFGISNQMLAAVALVL GTCVLVKMKRGQYAWVTLVPTVWLLVCTLTAGWQKLFDADPKVSFLTHASKFSAAIAEGKVLAPAKSLEQMQRIVFNDYL DAGLCALFMFVVLSIVAYGFKTAMQARAVNRPTDKETPFEPLPAAASAQS
Sequences:
>Translated_690_residues MNRIGEHLVWLAVAILGAFAFGTVALARGEAVSALWIVVAALCIYLIAYRYYSRFIADKVMQLDPKRMTPAWRHNDGLDY VPTNKAVLFGHHFAAIAGAGPLVGPVLAAQMGYMPGMLWILAGVVFAGAVQDFMILFISTRRDGRSLGDLVKSEMGTVPG MIALFGCFMIMIIILAVLALIVVKALAGSPWGTFTVAVTIPIALFMGIYTRYIRPGRIGEVSVIGFVLLMLAILGGQYVH ESAVLAPLFTYDGKALTWMLIIYGFIAAVLPVWLLLAPRDYLSTFLKIGTIIALAIGILIVAPELKMPAFTQFAQGGGPV WSGNLFPFLFITIACGAVSGFHALISSGTTPKLLENESHARFIGYGAMLAESFVAIMALVAASVIEPGVYFAMNSPSAVI GTSPEAVAQAVSTWGFVITPDVLIQTAKDVGENTIISRAGGAPTLAVGIAHILHQVVGGQAMMAFWYHFAILFEALFILT AVDAGTRAGRFMLQDLLGSFVPSLKRTDSLPANLIATALTVAAWGYFLYQGVVDPLGGINTLWPLFGISNQMLAAVALVL GTCVLVKMKRGQYAWVTLVPTVWLLVCTLTAGWQKLFDADPKVSFLTHASKFSAAIAEGKVLAPAKSLEQMQRIVFNDYL DAGLCALFMFVVLSIVAYGFKTAMQARAVNRPTDKETPFEPLPAAASAQS >Mature_690_residues MNRIGEHLVWLAVAILGAFAFGTVALARGEAVSALWIVVAALCIYLIAYRYYSRFIADKVMQLDPKRMTPAWRHNDGLDY VPTNKAVLFGHHFAAIAGAGPLVGPVLAAQMGYMPGMLWILAGVVFAGAVQDFMILFISTRRDGRSLGDLVKSEMGTVPG MIALFGCFMIMIIILAVLALIVVKALAGSPWGTFTVAVTIPIALFMGIYTRYIRPGRIGEVSVIGFVLLMLAILGGQYVH ESAVLAPLFTYDGKALTWMLIIYGFIAAVLPVWLLLAPRDYLSTFLKIGTIIALAIGILIVAPELKMPAFTQFAQGGGPV WSGNLFPFLFITIACGAVSGFHALISSGTTPKLLENESHARFIGYGAMLAESFVAIMALVAASVIEPGVYFAMNSPSAVI GTSPEAVAQAVSTWGFVITPDVLIQTAKDVGENTIISRAGGAPTLAVGIAHILHQVVGGQAMMAFWYHFAILFEALFILT AVDAGTRAGRFMLQDLLGSFVPSLKRTDSLPANLIATALTVAAWGYFLYQGVVDPLGGINTLWPLFGISNQMLAAVALVL GTCVLVKMKRGQYAWVTLVPTVWLLVCTLTAGWQKLFDADPKVSFLTHASKFSAAIAEGKVLAPAKSLEQMQRIVFNDYL DAGLCALFMFVVLSIVAYGFKTAMQARAVNRPTDKETPFEPLPAAASAQS
Specific function: Peptide utilization during carbon starvation [H]
COG id: COG1966
COG function: function code T; Carbon starvation protein, predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CstA family [H]
Homologues:
Organism=Escherichia coli, GI1786814, Length=689, Percent_Identity=70.5370101596517, Blast_Score=975, Evalue=0.0, Organism=Escherichia coli, GI87082431, Length=705, Percent_Identity=64.9645390070922, Blast_Score=906, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003706 [H]
Pfam domain/function: PF02554 CstA [H]
EC number: NA
Molecular weight: Translated: 73895; Mature: 73895
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRIGEHLVWLAVAILGAFAFGTVALARGEAVSALWIVVAALCIYLIAYRYYSRFIADKV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQLDPKRMTPAWRHNDGLDYVPTNKAVLFGHHFAAIAGAGPLVGPVLAAQMGYMPGMLWI HHCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHCCCCHHHHH LAGVVFAGAVQDFMILFISTRRDGRSLGDLVKSEMGTVPGMIALFGCFMIMIIILAVLAL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IVVKALAGSPWGTFTVAVTIPIALFMGIYTRYIRPGRIGEVSVIGFVLLMLAILGGQYVH HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHH ESAVLAPLFTYDGKALTWMLIIYGFIAAVLPVWLLLAPRDYLSTFLKIGTIIALAIGILI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VAPELKMPAFTQFAQGGGPVWSGNLFPFLFITIACGAVSGFHALISSGTTPKLLENESHA CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCC RFIGYGAMLAESFVAIMALVAASVIEPGVYFAMNSPSAVIGTSPEAVAQAVSTWGFVITP HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCHHHHHHHHHHCCCEECH DVLIQTAKDVGENTIISRAGGAPTLAVGIAHILHQVVGGQAMMAFWYHFAILFEALFILT HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AVDAGTRAGRFMLQDLLGSFVPSLKRTDSLPANLIATALTVAAWGYFLYQGVVDPLGGIN HHCCCCHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH TLWPLFGISNQMLAAVALVLGTCVLVKMKRGQYAWVTLVPTVWLLVCTLTAGWQKLFDAD HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCC PKVSFLTHASKFSAAIAEGKVLAPAKSLEQMQRIVFNDYLDAGLCALFMFVVLSIVAYGF CCHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTAMQARAVNRPTDKETPFEPLPAAASAQS HHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNRIGEHLVWLAVAILGAFAFGTVALARGEAVSALWIVVAALCIYLIAYRYYSRFIADKV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQLDPKRMTPAWRHNDGLDYVPTNKAVLFGHHFAAIAGAGPLVGPVLAAQMGYMPGMLWI HHCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHCCCCHHHHH LAGVVFAGAVQDFMILFISTRRDGRSLGDLVKSEMGTVPGMIALFGCFMIMIIILAVLAL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IVVKALAGSPWGTFTVAVTIPIALFMGIYTRYIRPGRIGEVSVIGFVLLMLAILGGQYVH HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHH ESAVLAPLFTYDGKALTWMLIIYGFIAAVLPVWLLLAPRDYLSTFLKIGTIIALAIGILI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VAPELKMPAFTQFAQGGGPVWSGNLFPFLFITIACGAVSGFHALISSGTTPKLLENESHA CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCC RFIGYGAMLAESFVAIMALVAASVIEPGVYFAMNSPSAVIGTSPEAVAQAVSTWGFVITP HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCHHHHHHHHHHCCCEECH DVLIQTAKDVGENTIISRAGGAPTLAVGIAHILHQVVGGQAMMAFWYHFAILFEALFILT HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AVDAGTRAGRFMLQDLLGSFVPSLKRTDSLPANLIATALTVAAWGYFLYQGVVDPLGGIN HHCCCCHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH TLWPLFGISNQMLAAVALVLGTCVLVKMKRGQYAWVTLVPTVWLLVCTLTAGWQKLFDAD HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCC PKVSFLTHASKFSAAIAEGKVLAPAKSLEQMQRIVFNDYLDAGLCALFMFVVLSIVAYGF CCHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTAMQARAVNRPTDKETPFEPLPAAASAQS HHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1848300; 9278503; 2521622 [H]