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The map label for this gene is ydfH [C]

Identifier: 73542121

GI number: 73542121

Start: 2670245

End: 2671003

Strand: Direct

Name: ydfH [C]

Synonym: Reut_A2435

Alternate gene names: 73542121

Gene position: 2670245-2671003 (Clockwise)

Preceding gene: 73542118

Following gene: 73542122

Centisome position: 70.15

GC content: 65.22

Gene sequence:

>759_bases
ATGTCCAAGAGCCTGAAGCTGATTGCCGGTGTCGCCGATGCCGCGCTGACCGAACAGAAGTCCGACAAAAGCGAGCGCCC
CGCTCGCAAGGGCTCGGTCGAAGATCGCATGTATCACGAGATCTATGACGCGATCATGGAGCACCGGCTGCCCCCGCGCA
CCAAGCTCACCGAGCATTCGCTTTGCGAAATCTATGCCACCGCGCGGCACACGGTACGCAAGGTGCTGTCGCACCTGGCT
GCCGACGGCATGGTGGACCTGGAACCGAATCGCGGCGCGTTCATTGCCAGCCCGTCCACCGATGAGGCGCACGACATGTT
CGAACTGCGCCAGATGCTGGAACGCGCGGTGCTCGACAAGCTCGCCGCCATGCCTGACGTCAAGACCGTGATCGCCCCGC
TGCGCAAGATGGTGGCCAGCGAACGCAAGGCCTTTCTCACGCATGACCGACCCACGTGGATCCGCCTCTCGGCCGAATTC
CACACCGCGCTGGCCGAGTTGTCCGGCAACGCGCTGCTCGTGAACATGATGCGCCGGCTGGTCTCGCGCACGACGCTGAT
GATCGCCAGCGTGGAAGCCCCCGGCAACAACGCGTGCTCGTTCGACGAACACGAGGAAATCCTCGACGCCCTCGAACAGG
GCGACGCCGCACTGGCGCAGTCGCGTATGGCGCACCACCTTGGCGCGTGCGCCGACCGCGTACAGCCCGACGATCCGGGC
GCCTTCGATCTTCGCAGCGTGCTGGGCCGCTCCACCTAG

Upstream 100 bases:

>100_bases
TTGGATCACCGCTTGCTGATAGCCCGCATTTCCGGCGCGACAGACGGTGGTCCCGCAGGGGCCGCAGCCCGCTGTTTCCG
TCCTACCGCTTGGTGCCAAG

Downstream 100 bases:

>100_bases
CACGGTGTTCCCGCCGGCATCACACCGAACGAGGCCTGGCTGCACTGCCCATGACAGCGTCCTGAAGGATGCGGCGGCGG
TGCTGTCCCAAAAGGAGGCC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; GntR-Family Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator Protein GntR Family; GntR Family Regulatory Protein; GntR Domain-Containing Protein; Regulatory Protein; Transcriptional Regulator Gntr Family; Transcriptional Regulator GntR Family Protein; GntR Family Transcription Regulator Protein; GntR Family Regulatory; Transcriptional Regulatory Protein GntR Family; Bacterial Regulatory Protein; GntR Family Transcription Regulator; Transcriptional Regulator MdcY Family Protein; Transcription Regulator Protein; FCD Domain Protein; Regulatory Protein GntR HTHGntR; GntR-Type Regulator; TRANSCRIPTIONal REGULATOR GntR Family

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSKSLKLIAGVADAALTEQKSDKSERPARKGSVEDRMYHEIYDAIMEHRLPPRTKLTEHSLCEIYATARHTVRKVLSHLA
ADGMVDLEPNRGAFIASPSTDEAHDMFELRQMLERAVLDKLAAMPDVKTVIAPLRKMVASERKAFLTHDRPTWIRLSAEF
HTALAELSGNALLVNMMRRLVSRTTLMIASVEAPGNNACSFDEHEEILDALEQGDAALAQSRMAHHLGACADRVQPDDPG
AFDLRSVLGRST

Sequences:

>Translated_252_residues
MSKSLKLIAGVADAALTEQKSDKSERPARKGSVEDRMYHEIYDAIMEHRLPPRTKLTEHSLCEIYATARHTVRKVLSHLA
ADGMVDLEPNRGAFIASPSTDEAHDMFELRQMLERAVLDKLAAMPDVKTVIAPLRKMVASERKAFLTHDRPTWIRLSAEF
HTALAELSGNALLVNMMRRLVSRTTLMIASVEAPGNNACSFDEHEEILDALEQGDAALAQSRMAHHLGACADRVQPDDPG
AFDLRSVLGRST
>Mature_251_residues
SKSLKLIAGVADAALTEQKSDKSERPARKGSVEDRMYHEIYDAIMEHRLPPRTKLTEHSLCEIYATARHTVRKVLSHLAA
DGMVDLEPNRGAFIASPSTDEAHDMFELRQMLERAVLDKLAAMPDVKTVIAPLRKMVASERKAFLTHDRPTWIRLSAEFH
TALAELSGNALLVNMMRRLVSRTTLMIASVEAPGNNACSFDEHEEILDALEQGDAALAQSRMAHHLGACADRVQPDDPGA
FDLRSVLGRST

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27907; Mature: 27776

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSLKLIAGVADAALTEQKSDKSERPARKGSVEDRMYHEIYDAIMEHRLPPRTKLTEHS
CCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH
LCEIYATARHTVRKVLSHLAADGMVDLEPNRGAFIASPSTDEAHDMFELRQMLERAVLDK
HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
LAAMPDVKTVIAPLRKMVASERKAFLTHDRPTWIRLSAEFHTALAELSGNALLVNMMRRL
HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHH
VSRTTLMIASVEAPGNNACSFDEHEEILDALEQGDAALAQSRMAHHLGACADRVQPDDPG
HHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCC
AFDLRSVLGRST
HHHHHHHHCCCC
>Mature Secondary Structure 
SKSLKLIAGVADAALTEQKSDKSERPARKGSVEDRMYHEIYDAIMEHRLPPRTKLTEHS
CCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH
LCEIYATARHTVRKVLSHLAADGMVDLEPNRGAFIASPSTDEAHDMFELRQMLERAVLDK
HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
LAAMPDVKTVIAPLRKMVASERKAFLTHDRPTWIRLSAEFHTALAELSGNALLVNMMRRL
HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHH
VSRTTLMIASVEAPGNNACSFDEHEEILDALEQGDAALAQSRMAHHLGACADRVQPDDPG
HHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCC
AFDLRSVLGRST
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA