| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is ilvD1 [H]
Identifier: 73542118
GI number: 73542118
Start: 2666226
End: 2668085
Strand: Direct
Name: ilvD1 [H]
Synonym: Reut_A2432
Alternate gene names: 73542118
Gene position: 2666226-2668085 (Clockwise)
Preceding gene: 73542117
Following gene: 73542121
Centisome position: 70.04
GC content: 65.48
Gene sequence:
>1860_bases ATGCCCGCATACCGTTCCAAGACCTCCACCGCCGGCCGCAACATGGCTGGGGCCCGCTCGCTGTGGCGCGCCACCGGCAT GAAAGACGACGATTTCAACAAGCCGATCATCGCGGTGGTGAACTCGTTCACCCAGTTCGTGCCCGGCCACGTCCACCTGA AGGACCTGGGCCAGCTCGTCGCGCGCGAAATCGAAGCCGCTGGCGGCGTGGCCAAGGAGTTCAACACGATTGCGGTCGAT GACGGCATCGCCATGGGCCACGACGGCATGCTGTATTCGCTGCCGAGCCGCGACATCATCGCCGACTCGGTCGAGTACAT GGTCAACGCGCACTGCGCCGACGCCATGGTGTGCATCTCGAACTGCGACAAGATCACCCCGGGCATGCTGATGGCCGCCA TGCGCCTGAACATCCCCGTGATCTTCGTCTCGGGCGGCCCGATGGAAGCCGGCAAGACGCGCCTGGCCAACCCGGTCACC AAGGCCGTCGAATTCAAGAAGCTCGACCTGGTTGACGCCATGGTGATCGCGGCCGACCCGGCCTATTCCGACGCCGACGT GGCCGAGGTCGAGCGCTCCGCCTGCCCCACCTGCGGCTCGTGCTCGGGCATGTTCACGGCCAATTCGATGAACTGCCTGA CCGAAGCACTGGGCCTGTCGCTGCCCGGCAATGGCACCGTCGTCGCCACGCACGCGGACCGCGAGCAGCTGTTCAAGCGC GCGGGCAGCCGTATCGTCGAACTGGCCCGCCAGTACTACGAGCAGGAAGACGCGCGCGTGCTGCCGCGTTCGGTCGGCTT CAAGGCGTTCGAGAACGCGATGACGCTGGACATCGCCATGGGCGGTTCCACGAATACCATCCTGCACCTGCTGGCAATCG CGCAGGAAGCGGGCATCGATTTCTCCATGAATGACATCGACCGCCTGTCGCGCGTCGTGCCACAGCTGTGCAAGGTGGCG CCCAACACCAACAAGTACCACATCGAAGACGTGCACCGCGCGGGCGGCATCATGGCCATCCTGGGCGAGCTCGAGCGTGC CGGCAAGCTGCATACCGACGTGCCGACCGTACATGCCCCGTCGCTCGGCGACGCGCTGAATCAGTGGGACATCGTCCGCA CGAAGGACGAGGCCGTCCGTCATTTCTACATGGCTGGCCCGGCCGGCATCCCGACGCAGGTGGCGTTCAGCCAGAACACG CGCTGGCCGAGCCTAGACCTGGACCGCGCCGAGGGCTGCATCCGCTCGTACGAGCACGCCTTCTCCAAGGAAGGTGGCCT GGCAGTGCTGCGCGGCAATATCGCGCTGGACGGCTGCGTGGTGAAGACTGCCGGCGTGGACGAAAGCATCCTCGTGTTCG AGGGTTCGGCTCACGTGACCGAATCGCAGGACGAGGCGGTCGAGAACATCCTCAACGACAAGGTCAAGGCCGGGGATGTC GTGATCGTGCGCTACGAAGGTCCCAAGGGCGGCCCCGGCATGCAGGAAATGCTCTACCCGACGAGCTACATCAAGTCGAA GGGCCTGGGCAAGGCTTGCGCGCTACTCACGGATGGCCGCTTCTCGGGCGGCACGTCCGGGCTGTCGATCGGCCACTGCT CGCCGGAAGCAGCCGCCGGCGGCGCCATCGGCCTCGTGCGCGACGGCGACAAGATCCGCATCGACATTCCGAACCGGACG ATCGATGTGCTCGTGTCGGACGAAGAACTGGCGCGCCGCCGCGAAGAGCAGAACGCCAAGGGCTGGAAGCCGGCGAAGGC ACGTCCGCGTAAAGTGTCGGCCGCACTGAAGGCGTATGCCAAGCTCGTCATGTCGGCGGACAAGGGCGCAGTGCGCGATC TGTCGTTGCTGGACGATTGA
Upstream 100 bases:
>100_bases CCCAGGGCGCAGCTCAAGAGGTTGTTCGCACGGGCGCATGAGGGGCCCCTATTCCCGTGGCCCCGCATCCTTTCCGCGAT ACTGATTTCACAACCCCACA
Downstream 100 bases:
>100_bases TATCGCGGCGGTCTTCGTGCCCGGCTGCGAACAAAGGCCGCTCTTCGGAGCGGCTTTTTTTTGTTTGTTGAGCCCGCGAG AACTTAAAAAAAACGGAGCC
Product: dihydroxy-acid dehydratase
Products: NA
Alternate protein names: DAD 1 [H]
Number of amino acids: Translated: 619; Mature: 618
Protein sequence:
>619_residues MPAYRSKTSTAGRNMAGARSLWRATGMKDDDFNKPIIAVVNSFTQFVPGHVHLKDLGQLVAREIEAAGGVAKEFNTIAVD DGIAMGHDGMLYSLPSRDIIADSVEYMVNAHCADAMVCISNCDKITPGMLMAAMRLNIPVIFVSGGPMEAGKTRLANPVT KAVEFKKLDLVDAMVIAADPAYSDADVAEVERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTVVATHADREQLFKR AGSRIVELARQYYEQEDARVLPRSVGFKAFENAMTLDIAMGGSTNTILHLLAIAQEAGIDFSMNDIDRLSRVVPQLCKVA PNTNKYHIEDVHRAGGIMAILGELERAGKLHTDVPTVHAPSLGDALNQWDIVRTKDEAVRHFYMAGPAGIPTQVAFSQNT RWPSLDLDRAEGCIRSYEHAFSKEGGLAVLRGNIALDGCVVKTAGVDESILVFEGSAHVTESQDEAVENILNDKVKAGDV VIVRYEGPKGGPGMQEMLYPTSYIKSKGLGKACALLTDGRFSGGTSGLSIGHCSPEAAAGGAIGLVRDGDKIRIDIPNRT IDVLVSDEELARRREEQNAKGWKPAKARPRKVSAALKAYAKLVMSADKGAVRDLSLLDD
Sequences:
>Translated_619_residues MPAYRSKTSTAGRNMAGARSLWRATGMKDDDFNKPIIAVVNSFTQFVPGHVHLKDLGQLVAREIEAAGGVAKEFNTIAVD DGIAMGHDGMLYSLPSRDIIADSVEYMVNAHCADAMVCISNCDKITPGMLMAAMRLNIPVIFVSGGPMEAGKTRLANPVT KAVEFKKLDLVDAMVIAADPAYSDADVAEVERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTVVATHADREQLFKR AGSRIVELARQYYEQEDARVLPRSVGFKAFENAMTLDIAMGGSTNTILHLLAIAQEAGIDFSMNDIDRLSRVVPQLCKVA PNTNKYHIEDVHRAGGIMAILGELERAGKLHTDVPTVHAPSLGDALNQWDIVRTKDEAVRHFYMAGPAGIPTQVAFSQNT RWPSLDLDRAEGCIRSYEHAFSKEGGLAVLRGNIALDGCVVKTAGVDESILVFEGSAHVTESQDEAVENILNDKVKAGDV VIVRYEGPKGGPGMQEMLYPTSYIKSKGLGKACALLTDGRFSGGTSGLSIGHCSPEAAAGGAIGLVRDGDKIRIDIPNRT IDVLVSDEELARRREEQNAKGWKPAKARPRKVSAALKAYAKLVMSADKGAVRDLSLLDD >Mature_618_residues PAYRSKTSTAGRNMAGARSLWRATGMKDDDFNKPIIAVVNSFTQFVPGHVHLKDLGQLVAREIEAAGGVAKEFNTIAVDD GIAMGHDGMLYSLPSRDIIADSVEYMVNAHCADAMVCISNCDKITPGMLMAAMRLNIPVIFVSGGPMEAGKTRLANPVTK AVEFKKLDLVDAMVIAADPAYSDADVAEVERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTVVATHADREQLFKRA GSRIVELARQYYEQEDARVLPRSVGFKAFENAMTLDIAMGGSTNTILHLLAIAQEAGIDFSMNDIDRLSRVVPQLCKVAP NTNKYHIEDVHRAGGIMAILGELERAGKLHTDVPTVHAPSLGDALNQWDIVRTKDEAVRHFYMAGPAGIPTQVAFSQNTR WPSLDLDRAEGCIRSYEHAFSKEGGLAVLRGNIALDGCVVKTAGVDESILVFEGSAHVTESQDEAVENILNDKVKAGDVV IVRYEGPKGGPGMQEMLYPTSYIKSKGLGKACALLTDGRFSGGTSGLSIGHCSPEAAAGGAIGLVRDGDKIRIDIPNRTI DVLVSDEELARRREEQNAKGWKPAKARPRKVSAALKAYAKLVMSADKGAVRDLSLLDD
Specific function: Valine and isoleucine biosynthesis; fourth step. [C]
COG id: COG0129
COG function: function code EG; Dihydroxyacid dehydratase/phosphogluconate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ilvD/edd family [H]
Homologues:
Organism=Escherichia coli, GI48994964, Length=621, Percent_Identity=73.9130434782609, Blast_Score=934, Evalue=0.0, Organism=Escherichia coli, GI1788157, Length=553, Percent_Identity=30.0180831826401, Blast_Score=195, Evalue=8e-51, Organism=Escherichia coli, GI2367371, Length=521, Percent_Identity=30.3262955854127, Blast_Score=189, Evalue=5e-49, Organism=Escherichia coli, GI1786464, Length=557, Percent_Identity=30.3411131059246, Blast_Score=178, Evalue=9e-46, Organism=Saccharomyces cerevisiae, GI6322476, Length=611, Percent_Identity=37.4795417348609, Blast_Score=350, Evalue=4e-97,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015928 - InterPro: IPR004404 - InterPro: IPR000581 - InterPro: IPR020558 [H]
Pfam domain/function: PF00920 ILVD_EDD [H]
EC number: =4.2.1.9 [H]
Molecular weight: Translated: 66305; Mature: 66174
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00886 ILVD_EDD_1 ; PS00887 ILVD_EDD_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAYRSKTSTAGRNMAGARSLWRATGMKDDDFNKPIIAVVNSFTQFVPGHVHLKDLGQLV CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHH AREIEAAGGVAKEFNTIAVDDGIAMGHDGMLYSLPSRDIIADSVEYMVNAHCADAMVCIS HHHHHHHCCHHHHCCEEEECCCEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH NCDKITPGMLMAAMRLNIPVIFVSGGPMEAGKTRLANPVTKAVEFKKLDLVDAMVIAADP CCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHEEEEECCC AYSDADVAEVERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTVVATHADREQLFKR CCCCCHHHHHHHHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHH AGSRIVELARQYYEQEDARVLPRSVGFKAFENAMTLDIAMGGSTNTILHLLAIAQEAGID HHHHHHHHHHHHHHCHHHHHCHHHHCHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCC FSMNDIDRLSRVVPQLCKVAPNTNKYHIEDVHRAGGIMAILGELERAGKLHTDVPTVHAP CCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCC SLGDALNQWDIVRTKDEAVRHFYMAGPAGIPTQVAFSQNTRWPSLDLDRAEGCIRSYEHA CHHHHHCCCCEEECHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHH FSKEGGLAVLRGNIALDGCVVKTAGVDESILVFEGSAHVTESQDEAVENILNDKVKAGDV HCCCCCEEEEECCEEECCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCE VIVRYEGPKGGPGMQEMLYPTSYIKSKGLGKACALLTDGRFSGGTSGLSIGHCSPEAAAG EEEEECCCCCCCCHHHHHCCHHHHHHCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCC GAIGLVRDGDKIRIDIPNRTIDVLVSDEELARRREEQNAKGWKPAKARPRKVSAALKAYA CCEEEEECCCEEEEECCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH KLVMSADKGAVRDLSLLDD HHHHHCCCCCCCCHHHCCC >Mature Secondary Structure PAYRSKTSTAGRNMAGARSLWRATGMKDDDFNKPIIAVVNSFTQFVPGHVHLKDLGQLV CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHH AREIEAAGGVAKEFNTIAVDDGIAMGHDGMLYSLPSRDIIADSVEYMVNAHCADAMVCIS HHHHHHHCCHHHHCCEEEECCCEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH NCDKITPGMLMAAMRLNIPVIFVSGGPMEAGKTRLANPVTKAVEFKKLDLVDAMVIAADP CCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHEEEEECCC AYSDADVAEVERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTVVATHADREQLFKR CCCCCHHHHHHHHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHH AGSRIVELARQYYEQEDARVLPRSVGFKAFENAMTLDIAMGGSTNTILHLLAIAQEAGID HHHHHHHHHHHHHHCHHHHHCHHHHCHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCC FSMNDIDRLSRVVPQLCKVAPNTNKYHIEDVHRAGGIMAILGELERAGKLHTDVPTVHAP CCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCC SLGDALNQWDIVRTKDEAVRHFYMAGPAGIPTQVAFSQNTRWPSLDLDRAEGCIRSYEHA CHHHHHCCCCEEECHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHH FSKEGGLAVLRGNIALDGCVVKTAGVDESILVFEGSAHVTESQDEAVENILNDKVKAGDV HCCCCCEEEEECCEEECCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCE VIVRYEGPKGGPGMQEMLYPTSYIKSKGLGKACALLTDGRFSGGTSGLSIGHCSPEAAAG EEEEECCCCCCCCHHHHHCCHHHHHHCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCC GAIGLVRDGDKIRIDIPNRTIDVLVSDEELARRREEQNAKGWKPAKARPRKVSAALKAYA CCEEEEECCCEEEEECCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH KLVMSADKGAVRDLSLLDD HHHHHCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA