| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is glnD
Identifier: 73541572
GI number: 73541572
Start: 2059860
End: 2062469
Strand: Direct
Name: glnD
Synonym: Reut_A1883
Alternate gene names: 73541572
Gene position: 2059860-2062469 (Clockwise)
Preceding gene: 73541571
Following gene: 73541573
Centisome position: 54.11
GC content: 65.44
Gene sequence:
>2610_bases GTGCCCACGAACCTTCCTGCCCTGCCCATGGACACCACGCCGGAACTCCTGCTCGCCGCGCGCGTTCGCGACCAGTTGAA AGCCGACAAGCAGGCCCTGTTTGCCGACTTTGACTTGTCGTCCCACGTCGGCACGCTGGTTACGCGTCTTCGCCGCGCCG TGGATGCCGCGCTCGCCGAGGCCTGGCGCGGGCTCGACATGCCTGCCGATGCAGCGCTGGTGGCGGTGGGCGGCTACGGC CGCGGAGAGCTGTTCCCGTACTCCGATGTGGACGTGCTGCTGTTGCTTCGGGCCGAGCCCGATGCCGACACCGTGAGCCG GCTCGAACGGTTCATCGGCATGTGCTGGGACCTGGGGCTGGAGATCGGCTCGTCAGTGCGCACCGTGGAAGATTGCATCC GCGAGGCGCGCGCCGATATCACGATCCAGACCTCGCTGCTCGAAGCGCGGCTGCTGACCGGCAACCGCAAGCTGTTCGAG GCGCTGCGCACGCAGCACCAGGCCGATCTCGACCCGGCCGCGTTCTTCCAGGCCAAGCTGCTGGAAATGCGCCAGCGCCA CGCCAAGTACCAGGACACGCCTTACGCGCTCGAGCCGAATTGCAAGGAAAGCCCGGGCGGCCTGCGCGATCTGCAGGTGA TCCTGTGGATGACCAAGGCTGCCGGCCTCGGCGACAGCTGGAAAGAATTGTTCGAGCGGGGCCTGCTGACGCAGCGCGAA GCGCAGGAGCTTTCGCGCAACGAACGCCTGCTGAAGACCATCCGCGCGCGACTGCATCTGGTGGCCGGGCGTCGGCAGGA CGTGCTGGTATTCGACCTGCAGACCGCACTGGCGGAATCATTCGGCTATCGGCAGAACGCCAACAAGCGCGCCAGCGAGC AGCTCATGCGCCGGTACTTCTGGGCCGCCAAGGCGGTGACCCAGCTCAACAGTGTGCTGCTGCTCAATATCGAGGCGCTG CTGTTCCCGAGCGAATCGCAGGTGACACGCGTGATCAACGAGCGCTTTGTCGAGCGCCAGGGCATGCTGGAGATCACGAG CGACAGTCTGTATGAAGACGACCCGCACGCGATCCTCGAGACTTTCCTGCTCTATGAGCGCACGCCGGGCATCAAGGGTC TGTCGCCGCGCACGCTGCGGGGCCTCTACAACGCGCGTACCGTGATGGATGCGCGCTGGCGCAGCGACCCGGAAAACCGC CGCCTGTTCCTGGCCATCCTGCAGGAACCACAGGGCATCACCCATGCGCTGCGCCTGATGAACCAGACCAGCGTGCTGGG GCGTTACCTGATCAACTTCCGGCGCATCGTCGGCCAGATGCAGCACGATCTCTTCCACGTCTACACCGTGGACCAGCACA TCCTGATGGTGGTGCGCAATATGCGCCGCTTCGCGATCGTCGAGCACACGCACGAATTCCCGTTCTGCAGCCAGCTCATG GCGAGCTTCGACAAGCCTTGGGTACTGTCAGTGGCGGCGCTGTTCCACGACATCGCCAAAGGCCGCGGCGGCGACCACTC GAAGCTGGGCACCGTGGATGCGCGCCGCTTCTGCAAGCAACACGGCATCGGGCGCGAGGACGCCGACCTGATCTGCTGGC TGGTGGAGCACCACCTGACGATGAGTCACGTGGCGCAGAAGCAGGACCTGACCGATCCTGACGTCGTTCACGCGTTCGCG CGCGTGGTCGGCGACGAGCGGCACCTTACGGCGCTGTACCTGCTGACCGTGGCCGATGTCCGCGGCACCAGCCCCAAGGT CTGGAATGCCTGGAAGGGCAAGCTGCTCGAAGACCTGTACCGCATCACGCTGCGCGTGCTGGGCGGCGCCAGGGTCGATC CGCATTCGATCTGGGCGCAGCGCCAGGAAGAAACCATCTCGCAGCTGCGCCTGAAGGCGTTCGACCCCGAACTGGGCAAG CCGCTGTGGGCACAACTCGACGTGGCCTTCTTCCTGCGACACGATTCGCGCGACATCGCCTGGCTGACCCGTCACCTGTT CAACAAGGTTGACAGCCCGGTGCCGGTGGTCAAGGCACGCATCTCGCCGGCTGGCGAAGGCCTGCAGGTAGCCGTCTACG TCAAGGACCAGCCCGACCTTTTCGCGCGCATTTGCGGCTACTTCGAGCGCAAGGCGTTCTCGATCCAGGATGCCAAGATC CACACGACGCGCCATGGCTACGCGCTGGACACGTTCCAGGTCACCGACCCGGGCCTGGCCGACGATGGCGGCAACTATCG CGATATCCTGGCGCTGGTCGAGCATGAACTCGGCGACCGCCTGCAGCAACAGGCTGCGCTGCCCGAACCGAGCCAGGGCC GCCTGTCGCGCCAGTCGCGCAGCTTCCCGATCAAGCCGCGCGTGGACCTGCGGCCCGACGAGCGCGGCCAGTATTACCTG CTGTCGCTGTCGGCCAACGACCGCACCGGCCTGCTTTACGCGATCACGCGCGTGCTGGCAAAACATCGCGTGTCCGTGCA TACGGCGCGCATCAACACCCTCGGGGAACGCGTCGAAGACGTGTTCCTGGTCGACGGCAGCCGTCTTGCCGCCGACAACC GATTGCAGATTCAGCTTGAACAGGACTTGCTCGCCGCGCTGGAAATCTGA
Upstream 100 bases:
>100_bases CCGGCACGCCGGCGCCGCCCGCATTCATTACGGAATCGGTCGCGGCCTGAGCCGCAACATCGTTGGGGGGCGCCTGACAG GCGCCTTTCTTTTTCCAGCC
Downstream 100 bases:
>100_bases TCCGGCCGCGCAGCATTGATGATATGACCGACAGCAATTCGCCGAAGCGCAAGACGCTCGGCATCAAGCCGCCCGACGGC ACCGCCACCCGCAAGCCGGC
Product: PII uridylyl-transferase
Products: NA
Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme
Number of amino acids: Translated: 869; Mature: 868
Protein sequence:
>869_residues MPTNLPALPMDTTPELLLAARVRDQLKADKQALFADFDLSSHVGTLVTRLRRAVDAALAEAWRGLDMPADAALVAVGGYG RGELFPYSDVDVLLLLRAEPDADTVSRLERFIGMCWDLGLEIGSSVRTVEDCIREARADITIQTSLLEARLLTGNRKLFE ALRTQHQADLDPAAFFQAKLLEMRQRHAKYQDTPYALEPNCKESPGGLRDLQVILWMTKAAGLGDSWKELFERGLLTQRE AQELSRNERLLKTIRARLHLVAGRRQDVLVFDLQTALAESFGYRQNANKRASEQLMRRYFWAAKAVTQLNSVLLLNIEAL LFPSESQVTRVINERFVERQGMLEITSDSLYEDDPHAILETFLLYERTPGIKGLSPRTLRGLYNARTVMDARWRSDPENR RLFLAILQEPQGITHALRLMNQTSVLGRYLINFRRIVGQMQHDLFHVYTVDQHILMVVRNMRRFAIVEHTHEFPFCSQLM ASFDKPWVLSVAALFHDIAKGRGGDHSKLGTVDARRFCKQHGIGREDADLICWLVEHHLTMSHVAQKQDLTDPDVVHAFA RVVGDERHLTALYLLTVADVRGTSPKVWNAWKGKLLEDLYRITLRVLGGARVDPHSIWAQRQEETISQLRLKAFDPELGK PLWAQLDVAFFLRHDSRDIAWLTRHLFNKVDSPVPVVKARISPAGEGLQVAVYVKDQPDLFARICGYFERKAFSIQDAKI HTTRHGYALDTFQVTDPGLADDGGNYRDILALVEHELGDRLQQQAALPEPSQGRLSRQSRSFPIKPRVDLRPDERGQYYL LSLSANDRTGLLYAITRVLAKHRVSVHTARINTLGERVEDVFLVDGSRLAADNRLQIQLEQDLLAALEI
Sequences:
>Translated_869_residues MPTNLPALPMDTTPELLLAARVRDQLKADKQALFADFDLSSHVGTLVTRLRRAVDAALAEAWRGLDMPADAALVAVGGYG RGELFPYSDVDVLLLLRAEPDADTVSRLERFIGMCWDLGLEIGSSVRTVEDCIREARADITIQTSLLEARLLTGNRKLFE ALRTQHQADLDPAAFFQAKLLEMRQRHAKYQDTPYALEPNCKESPGGLRDLQVILWMTKAAGLGDSWKELFERGLLTQRE AQELSRNERLLKTIRARLHLVAGRRQDVLVFDLQTALAESFGYRQNANKRASEQLMRRYFWAAKAVTQLNSVLLLNIEAL LFPSESQVTRVINERFVERQGMLEITSDSLYEDDPHAILETFLLYERTPGIKGLSPRTLRGLYNARTVMDARWRSDPENR RLFLAILQEPQGITHALRLMNQTSVLGRYLINFRRIVGQMQHDLFHVYTVDQHILMVVRNMRRFAIVEHTHEFPFCSQLM ASFDKPWVLSVAALFHDIAKGRGGDHSKLGTVDARRFCKQHGIGREDADLICWLVEHHLTMSHVAQKQDLTDPDVVHAFA RVVGDERHLTALYLLTVADVRGTSPKVWNAWKGKLLEDLYRITLRVLGGARVDPHSIWAQRQEETISQLRLKAFDPELGK PLWAQLDVAFFLRHDSRDIAWLTRHLFNKVDSPVPVVKARISPAGEGLQVAVYVKDQPDLFARICGYFERKAFSIQDAKI HTTRHGYALDTFQVTDPGLADDGGNYRDILALVEHELGDRLQQQAALPEPSQGRLSRQSRSFPIKPRVDLRPDERGQYYL LSLSANDRTGLLYAITRVLAKHRVSVHTARINTLGERVEDVFLVDGSRLAADNRLQIQLEQDLLAALEI >Mature_868_residues PTNLPALPMDTTPELLLAARVRDQLKADKQALFADFDLSSHVGTLVTRLRRAVDAALAEAWRGLDMPADAALVAVGGYGR GELFPYSDVDVLLLLRAEPDADTVSRLERFIGMCWDLGLEIGSSVRTVEDCIREARADITIQTSLLEARLLTGNRKLFEA LRTQHQADLDPAAFFQAKLLEMRQRHAKYQDTPYALEPNCKESPGGLRDLQVILWMTKAAGLGDSWKELFERGLLTQREA QELSRNERLLKTIRARLHLVAGRRQDVLVFDLQTALAESFGYRQNANKRASEQLMRRYFWAAKAVTQLNSVLLLNIEALL FPSESQVTRVINERFVERQGMLEITSDSLYEDDPHAILETFLLYERTPGIKGLSPRTLRGLYNARTVMDARWRSDPENRR LFLAILQEPQGITHALRLMNQTSVLGRYLINFRRIVGQMQHDLFHVYTVDQHILMVVRNMRRFAIVEHTHEFPFCSQLMA SFDKPWVLSVAALFHDIAKGRGGDHSKLGTVDARRFCKQHGIGREDADLICWLVEHHLTMSHVAQKQDLTDPDVVHAFAR VVGDERHLTALYLLTVADVRGTSPKVWNAWKGKLLEDLYRITLRVLGGARVDPHSIWAQRQEETISQLRLKAFDPELGKP LWAQLDVAFFLRHDSRDIAWLTRHLFNKVDSPVPVVKARISPAGEGLQVAVYVKDQPDLFARICGYFERKAFSIQDAKIH TTRHGYALDTFQVTDPGLADDGGNYRDILALVEHELGDRLQQQAALPEPSQGRLSRQSRSFPIKPRVDLRPDERGQYYLL SLSANDRTGLLYAITRVLAKHRVSVHTARINTLGERVEDVFLVDGSRLAADNRLQIQLEQDLLAALEI
Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein
COG id: COG2844
COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnD family
Homologues:
Organism=Escherichia coli, GI1786363, Length=875, Percent_Identity=36.1142857142857, Blast_Score=501, Evalue=1e-142,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLND_CUPPJ (Q470D5)
Other databases:
- EMBL: CP000090 - RefSeq: YP_296092.1 - ProteinModelPortal: Q470D5 - GeneID: 3609562 - GenomeReviews: CP000090_GR - KEGG: reu:Reut_A1883 - NMPDR: fig|264198.3.peg.2413 - HOGENOM: HBG687872 - OMA: MQHDLFH - ProtClustDB: PRK03059 - BioCyc: REUT264198:REUT_A1883-MONOMER - HAMAP: MF_00277 - InterPro: IPR002912 - InterPro: IPR010043 - InterPro: IPR003607 - InterPro: IPR002934 - InterPro: IPR013546 - PANTHER: PTHR13734:SF1 - PIRSF: PIRSF006288 - SMART: SM00471 - TIGRFAMs: TIGR01693
Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase; PF01909 NTP_transf_2
EC number: =2.7.7.59
Molecular weight: Translated: 98723; Mature: 98592
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTNLPALPMDTTPELLLAARVRDQLKADKQALFADFDLSSHVGTLVTRLRRAVDAALAE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHH AWRGLDMPADAALVAVGGYGRGELFPYSDVDVLLLLRAEPDADTVSRLERFIGMCWDLGL HHCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH EIGSSVRTVEDCIREARADITIQTSLLEARLLTGNRKLFEALRTQHQADLDPAAFFQAKL HHCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHH LEMRQRHAKYQDTPYALEPNCKESPGGLRDLQVILWMTKAAGLGDSWKELFERGLLTQRE HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHH AQELSRNERLLKTIRARLHLVAGRRQDVLVFDLQTALAESFGYRQNANKRASEQLMRRYF HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHH WAAKAVTQLNSVLLLNIEALLFPSESQVTRVINERFVERQGMLEITSDSLYEDDPHAILE HHHHHHHHHHHEEEEEEHHEEECCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHH TFLLYERTPGIKGLSPRTLRGLYNARTVMDARWRSDPENRRLFLAILQEPQGITHALRLM HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHH NQTSVLGRYLINFRRIVGQMQHDLFHVYTVDQHILMVVRNMRRFAIVEHTHEFPFCSQLM HHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ASFDKPWVLSVAALFHDIAKGRGGDHSKLGTVDARRFCKQHGIGREDADLICWLVEHHLT HHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH MSHVAQKQDLTDPDVVHAFARVVGDERHLTALYLLTVADVRGTSPKVWNAWKGKLLEDLY HHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH RITLRVLGGARVDPHSIWAQRQEETISQLRLKAFDPELGKPLWAQLDVAFFLRHDSRDIA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEECCCCHHH WLTRHLFNKVDSPVPVVKARISPAGEGLQVAVYVKDQPDLFARICGYFERKAFSIQDAKI HHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEE HTTRHGYALDTFQVTDPGLADDGGNYRDILALVEHELGDRLQQQAALPEPSQGRLSRQSR EECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC SFPIKPRVDLRPDERGQYYLLSLSANDRTGLLYAITRVLAKHRVSVHTARINTLGERVED CCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VFLVDGSRLAADNRLQIQLEQDLLAALEI EEEECCCEECCCCEEEEEEHHHHHHHHCC >Mature Secondary Structure PTNLPALPMDTTPELLLAARVRDQLKADKQALFADFDLSSHVGTLVTRLRRAVDAALAE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHH AWRGLDMPADAALVAVGGYGRGELFPYSDVDVLLLLRAEPDADTVSRLERFIGMCWDLGL HHCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH EIGSSVRTVEDCIREARADITIQTSLLEARLLTGNRKLFEALRTQHQADLDPAAFFQAKL HHCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHH LEMRQRHAKYQDTPYALEPNCKESPGGLRDLQVILWMTKAAGLGDSWKELFERGLLTQRE HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHH AQELSRNERLLKTIRARLHLVAGRRQDVLVFDLQTALAESFGYRQNANKRASEQLMRRYF HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHH WAAKAVTQLNSVLLLNIEALLFPSESQVTRVINERFVERQGMLEITSDSLYEDDPHAILE HHHHHHHHHHHEEEEEEHHEEECCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHH TFLLYERTPGIKGLSPRTLRGLYNARTVMDARWRSDPENRRLFLAILQEPQGITHALRLM HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHH NQTSVLGRYLINFRRIVGQMQHDLFHVYTVDQHILMVVRNMRRFAIVEHTHEFPFCSQLM HHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ASFDKPWVLSVAALFHDIAKGRGGDHSKLGTVDARRFCKQHGIGREDADLICWLVEHHLT HHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH MSHVAQKQDLTDPDVVHAFARVVGDERHLTALYLLTVADVRGTSPKVWNAWKGKLLEDLY HHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH RITLRVLGGARVDPHSIWAQRQEETISQLRLKAFDPELGKPLWAQLDVAFFLRHDSRDIA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEECCCCHHH WLTRHLFNKVDSPVPVVKARISPAGEGLQVAVYVKDQPDLFARICGYFERKAFSIQDAKI HHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEE HTTRHGYALDTFQVTDPGLADDGGNYRDILALVEHELGDRLQQQAALPEPSQGRLSRQSR EECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC SFPIKPRVDLRPDERGQYYLLSLSANDRTGLLYAITRVLAKHRVSVHTARINTLGERVED CCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VFLVDGSRLAADNRLQIQLEQDLLAALEI EEEECCCEECCCCEEEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA