| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is map [H]
Identifier: 73541571
GI number: 73541571
Start: 2058991
End: 2059809
Strand: Direct
Name: map [H]
Synonym: Reut_A1882
Alternate gene names: 73541571
Gene position: 2058991-2059809 (Clockwise)
Preceding gene: 73541554
Following gene: 73541572
Centisome position: 54.09
GC content: 64.35
Gene sequence:
>819_bases ATGAGCATCCACCTGAATACCGCCGAAGACGTCGCCCAAATGCGCGTGGCTTGCCGCCTTGCCTCGGAAGTCCTCGACTA CATCACGCCGTTCGTGAAGCCTGGTGTGACGACCGGCGAACTCGACCGGCTGTGCCACGCCTACATGCGTGACGTACAGG GCACCGTACCGGCCCCGCTAAATTATGCGCCTCCGGGCTACCCGCCTTTCCCCGGCGCGATCTGCACTTCGGTCAATGAC GTGATCTGCCACGGCATTCCTGGTGACCGCGTGCTCAAGGCCGGCGATGCCATCAACCTGGATATCACCGTCATCACCAA GGAAGGCTACTACGGCGACACCAGCCGCATGTTCATCGTTGGCGAGGGCTCGATCCTCGCCAAGCGCCTGGCCCAAGTGA CTTACGAGTGCATGTGGAAGGGCATCGCGCAAGTCCGCCATGGCGCGCGCCTCGGCGACATCGGCCACGCCATCCAGGTG CATGCCGAAGCGGCCGGCTACAGCGTGGTGCGCGAGTACTGCGGCCACGGCATCGGCAAGAACTTCCATGAAGATCCGCA GATCCTGCACTACGGCCGCGCGGGTACGGGCGCCGAGATCAAGGCAGGCATGATCTTCACGGTCGAGCCGATGATCAACG CCGGCAAGCGCGACATCCGCACCATGCCTGACCAGTGGACGGTCAAGACCCGCGACCGCAGCCTGTCCGCGCAGTGGGAA CATACCGTGCTCGTGACCGAAACCGGCTACGAGGTGCTGACGGTCTCCGCCGGCACGCCGGCGCCGCCCGCATTCATTAC GGAATCGGTCGCGGCCTGA
Upstream 100 bases:
>100_bases GATCGCTGCGATCAGGCGCCGATGGTGCGATAATCCCACATTACCCTATCGATTCCGGCGCGGCCTGTGGCCTCGCCATC ACTTATTCTGGCGAAGCAGC
Downstream 100 bases:
>100_bases GCCGCAACATCGTTGGGGGGCGCCTGACAGGCGCCTTTCTTTTTCCAGCCGTGCCCACGAACCTTCCTGCCCTGCCCATG GACACCACGCCGGAACTCCT
Product: methionine aminopeptidase
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MSIHLNTAEDVAQMRVACRLASEVLDYITPFVKPGVTTGELDRLCHAYMRDVQGTVPAPLNYAPPGYPPFPGAICTSVND VICHGIPGDRVLKAGDAINLDITVITKEGYYGDTSRMFIVGEGSILAKRLAQVTYECMWKGIAQVRHGARLGDIGHAIQV HAEAAGYSVVREYCGHGIGKNFHEDPQILHYGRAGTGAEIKAGMIFTVEPMINAGKRDIRTMPDQWTVKTRDRSLSAQWE HTVLVTETGYEVLTVSAGTPAPPAFITESVAA
Sequences:
>Translated_272_residues MSIHLNTAEDVAQMRVACRLASEVLDYITPFVKPGVTTGELDRLCHAYMRDVQGTVPAPLNYAPPGYPPFPGAICTSVND VICHGIPGDRVLKAGDAINLDITVITKEGYYGDTSRMFIVGEGSILAKRLAQVTYECMWKGIAQVRHGARLGDIGHAIQV HAEAAGYSVVREYCGHGIGKNFHEDPQILHYGRAGTGAEIKAGMIFTVEPMINAGKRDIRTMPDQWTVKTRDRSLSAQWE HTVLVTETGYEVLTVSAGTPAPPAFITESVAA >Mature_271_residues SIHLNTAEDVAQMRVACRLASEVLDYITPFVKPGVTTGELDRLCHAYMRDVQGTVPAPLNYAPPGYPPFPGAICTSVNDV ICHGIPGDRVLKAGDAINLDITVITKEGYYGDTSRMFIVGEGSILAKRLAQVTYECMWKGIAQVRHGARLGDIGHAIQVH AEAAGYSVVREYCGHGIGKNFHEDPQILHYGRAGTGAEIKAGMIFTVEPMINAGKRDIRTMPDQWTVKTRDRSLSAQWEH TVLVTETGYEVLTVSAGTPAPPAFITESVAA
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=267, Percent_Identity=47.1910112359551, Blast_Score=238, Evalue=6e-63, Organism=Homo sapiens, GI40385867, Length=255, Percent_Identity=39.6078431372549, Blast_Score=179, Evalue=2e-45, Organism=Escherichia coli, GI1786364, Length=263, Percent_Identity=54.3726235741445, Blast_Score=301, Evalue=3e-83, Organism=Escherichia coli, GI1788728, Length=256, Percent_Identity=27.34375, Blast_Score=74, Evalue=7e-15, Organism=Caenorhabditis elegans, GI71996291, Length=260, Percent_Identity=45.3846153846154, Blast_Score=216, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6323273, Length=254, Percent_Identity=43.7007874015748, Blast_Score=211, Evalue=1e-55, Organism=Drosophila melanogaster, GI21355531, Length=258, Percent_Identity=44.9612403100775, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI24583427, Length=253, Percent_Identity=37.1541501976285, Blast_Score=169, Evalue=2e-42,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 29467; Mature: 29336
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS00680 MAP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIHLNTAEDVAQMRVACRLASEVLDYITPFVKPGVTTGELDRLCHAYMRDVQGTVPAPL CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC NYAPPGYPPFPGAICTSVNDVICHGIPGDRVLKAGDAINLDITVITKEGYYGDTSRMFIV CCCCCCCCCCCCHHHHCCCHHEECCCCCCCEEECCCEEEEEEEEEEECCCCCCCCEEEEE GEGSILAKRLAQVTYECMWKGIAQVRHGARLGDIGHAIQVHAEAAGYSVVREYCGHGIGK ECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCC NFHEDPQILHYGRAGTGAEIKAGMIFTVEPMINAGKRDIRTMPDQWTVKTRDRSLSAQWE CCCCCCCEEEECCCCCCCEEECCEEEEECHHHCCCCHHHHCCCCCEEEEECCCCCCCCCC HTVLVTETGYEVLTVSAGTPAPPAFITESVAA EEEEEEECCCEEEEEECCCCCCHHHHHHHHCC >Mature Secondary Structure SIHLNTAEDVAQMRVACRLASEVLDYITPFVKPGVTTGELDRLCHAYMRDVQGTVPAPL EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC NYAPPGYPPFPGAICTSVNDVICHGIPGDRVLKAGDAINLDITVITKEGYYGDTSRMFIV CCCCCCCCCCCCHHHHCCCHHEECCCCCCCEEECCCEEEEEEEEEEECCCCCCCCEEEEE GEGSILAKRLAQVTYECMWKGIAQVRHGARLGDIGHAIQVHAEAAGYSVVREYCGHGIGK ECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCC NFHEDPQILHYGRAGTGAEIKAGMIFTVEPMINAGKRDIRTMPDQWTVKTRDRSLSAQWE CCCCCCCEEEECCCCCCCEEECCEEEEECHHHCCCCHHHHCCCCCEEEEECCCCCCCCCC HTVLVTETGYEVLTVSAGTPAPPAFITESVAA EEEEEEECCCEEEEEECCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]