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The map label for this gene is ydfG [H]

Identifier: 73541495

GI number: 73541495

Start: 1973186

End: 1973623

Strand: Direct

Name: ydfG [H]

Synonym: Reut_A1806

Alternate gene names: 73541495

Gene position: 1973186-1973623 (Clockwise)

Preceding gene: 73541494

Following gene: 73541497

Centisome position: 51.84

GC content: 64.38

Gene sequence:

>438_bases
ATGCAACAACGTCTGGATTTCTACAAGCCAAGCCCCGCCGTCATCAAGGCCATCATGGCGCTCGAAGAACAGATCGCCAG
GAGCGGATTGGACAAGCCGCTGGTGGAACTGGTGCGCCTGCGCGCATCGCAGATCAACGGCTGCGCCTTCTGCATCGACC
TGCACACGACCGACGCGCGCAAGGGCGGCGAAGACGACCGCCGCCTGGCGACCGTGTCGGTGTGGCGCGAAACGCCGTTC
TTCACCGATCGCGAGCGCGCCGCGCTGGCATGGACCGAGGCCGTGACGCTGGTGTCCCAAGATCACGTGCCCGACGCAGT
CTGGGAAGCGGTGCGCCCGCATTTCGACGATGCGGAACTGGTCAACCTTACGTTGCTGGTGGCCGCCATCAACACCTGGA
ACCGCTTCGCGATTTCGTTCCGCAAGACGCCGGCCTGA

Upstream 100 bases:

>100_bases
TCGGCCATTTTGCATAACCAGTTGGCGTCCTACTCTTGTTCCCATGGCGACGCCGTCCGGCGTCGCGCAACAGACCCCGA
GACACGAACTGGAGCAAGCC

Downstream 100 bases:

>100_bases
TACAGCCGCTCAGGCAGCCCGGAGCCGGCGCCACAGCGTGGTCGGGCTGATCCCGAGGATGTGGCACGCCGCGTTGCGGT
CGCCACCGCACTCGGCCAGC

Product: alkylhydroperoxidase AhpD core

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MQQRLDFYKPSPAVIKAIMALEEQIARSGLDKPLVELVRLRASQINGCAFCIDLHTTDARKGGEDDRRLATVSVWRETPF
FTDRERAALAWTEAVTLVSQDHVPDAVWEAVRPHFDDAELVNLTLLVAAINTWNRFAISFRKTPA

Sequences:

>Translated_145_residues
MQQRLDFYKPSPAVIKAIMALEEQIARSGLDKPLVELVRLRASQINGCAFCIDLHTTDARKGGEDDRRLATVSVWRETPF
FTDRERAALAWTEAVTLVSQDHVPDAVWEAVRPHFDDAELVNLTLLVAAINTWNRFAISFRKTPA
>Mature_145_residues
MQQRLDFYKPSPAVIKAIMALEEQIARSGLDKPLVELVRLRASQINGCAFCIDLHTTDARKGGEDDRRLATVSVWRETPF
FTDRERAALAWTEAVTLVSQDHVPDAVWEAVRPHFDDAELVNLTLLVAAINTWNRFAISFRKTPA

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788050, Length=111, Percent_Identity=38.7387387387387, Blast_Score=67, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 16391; Mature: 16391

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQRLDFYKPSPAVIKAIMALEEQIARSGLDKPLVELVRLRASQINGCAFCIDLHTTDAR
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCC
KGGEDDRRLATVSVWRETPFFTDRERAALAWTEAVTLVSQDHVPDAVWEAVRPHFDDAEL
CCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHH
VNLTLLVAAINTWNRFAISFRKTPA
HHHHHHHHHHHCCCEEEEEEECCCC
>Mature Secondary Structure
MQQRLDFYKPSPAVIKAIMALEEQIARSGLDKPLVELVRLRASQINGCAFCIDLHTTDAR
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCC
KGGEDDRRLATVSVWRETPFFTDRERAALAWTEAVTLVSQDHVPDAVWEAVRPHFDDAEL
CCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHH
VNLTLLVAAINTWNRFAISFRKTPA
HHHHHHHHHHHCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]