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The map label for this gene is xseB [H]

Identifier: 73540583

GI number: 73540583

Start: 957690

End: 958001

Strand: Direct

Name: xseB [H]

Synonym: Reut_A0880

Alternate gene names: 73540583

Gene position: 957690-958001 (Clockwise)

Preceding gene: 73540579

Following gene: 73540584

Centisome position: 25.16

GC content: 64.74

Gene sequence:

>312_bases
ATGCCAAAAACCACGACCGATCCGGTCCAGACCGAAGACACTGCGGCAGGTTCCGCGCCGCCCGCTTCGTATGAAGCGGC
GATGGCCGAGCTTGAAACGCTGGTCGCCAGCATGGAAAGCGGTGAACTGCCGCTGGAAGCGTCGCTGGCGGCCTACCGTC
GCGGCGCTGAGCTGGTCCGCTACTGCCAGCAGAAGCTCGAGCGGGTGGAGCAGCAGGTCAGGGTACTCGAAGGCGACGTG
CTGAAGCCCATGGCCGGTGATGCCGGAAACGCCGGAAACGCCGGAAACGCCAACGGCATGGAGCAGGAATGA

Upstream 100 bases:

>100_bases
CAAAAAGGACCCTGCGAGTGATGCATACGTCCGGCACCGGAGTGGGGCGAGCGCCGGGTTTGGCGTAAAATCCGGGCTTC
CCACAGTTCCCAAGCCTGAC

Downstream 100 bases:

>100_bases
CCGAATTCGCAAGCTGGATGCGGGCGCAGGGGGCCCGGACCGAGGCCGCGCTGGACCAAACGTTGCCAAATGCCGACACC
GTGCCGCATACACTGCATGA

Product: exodeoxyribonuclease VII small subunit

Products: NA

Alternate protein names: Exodeoxyribonuclease VII small subunit; Exonuclease VII small subunit [H]

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MPKTTTDPVQTEDTAAGSAPPASYEAAMAELETLVASMESGELPLEASLAAYRRGAELVRYCQQKLERVEQQVRVLEGDV
LKPMAGDAGNAGNAGNANGMEQE

Sequences:

>Translated_103_residues
MPKTTTDPVQTEDTAAGSAPPASYEAAMAELETLVASMESGELPLEASLAAYRRGAELVRYCQQKLERVEQQVRVLEGDV
LKPMAGDAGNAGNAGNANGMEQE
>Mature_102_residues
PKTTTDPVQTEDTAAGSAPPASYEAAMAELETLVASMESGELPLEASLAAYRRGAELVRYCQQKLERVEQQVRVLEGDVL
KPMAGDAGNAGNAGNANGMEQE

Specific function: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides [H]

COG id: COG1722

COG function: function code L; Exonuclease VII small subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xseB family [H]

Homologues:

Organism=Escherichia coli, GI1786624, Length=59, Percent_Identity=49.1525423728814, Blast_Score=63, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003761
- ProDom:   PD028235 [H]

Pfam domain/function: PF02609 Exonuc_VII_S [H]

EC number: =3.1.11.6 [H]

Molecular weight: Translated: 10855; Mature: 10724

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKTTTDPVQTEDTAAGSAPPASYEAAMAELETLVASMESGELPLEASLAAYRRGAELVR
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHH
YCQQKLERVEQQVRVLEGDVLKPMAGDAGNAGNAGNANGMEQE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PKTTTDPVQTEDTAAGSAPPASYEAAMAELETLVASMESGELPLEASLAAYRRGAELVR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHH
YCQQKLERVEQQVRVLEGDVLKPMAGDAGNAGNAGNANGMEQE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]