| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is zupT [H]
Identifier: 73540579
GI number: 73540579
Start: 953256
End: 954173
Strand: Direct
Name: zupT [H]
Synonym: Reut_A0876
Alternate gene names: 73540579
Gene position: 953256-954173 (Clockwise)
Preceding gene: 73540578
Following gene: 73540583
Centisome position: 25.04
GC content: 65.58
Gene sequence:
>918_bases TTGCAACATTGTTGCGTTTGCCGTCCGCACAGCGCCGGGCGGAACCGGCATGCCGCGGATGCGGCACCACCGCCCCGGGA GCCCATCATCCACTCGACCCTTCTGTACATCCTGCTCGCCGCCACGATTTCCGGCGTGGGCAGCATTTTCGGCGCGGCGC TGTTGTCGCTGACAATGGCCTCGCGCGTGGTCGAACGCATGGTCAGCTTCTCGGTGGGCGTGCTGCTGGCAACGGCCTTG CTCCATTCGTTGCCCGAGGCATTCGAGTCGGGTGCCGATCCGCGAGCCTTGTTCGGCACGCTTCTGGCTGGGCTGCTGGG CTTCTTCCTGCTCGAAAAGATCTCGCTGCTGCGCCACTCGCACCATCACGAGGGCGACGGGCACCACCATCACCACGGCC ACGACCGTGAAGAAGCGGGCCGCAGCGGCCTGACCATCCTGGTCGGCGACACTTTCCACAACTTTGCCGACGGCATTGTG ATCGCGGCGGCCTTCCTGGCCGATCCGAACATCGGCATCGTCACGGCGCTGGCCATCGCCGCGCATGAGATTCCGCAGGA AGTCGGTGATTTCATCGTGCTGCTCAACGCCGGCTTTTCGAAGGCGCGCGCTTTTGCGTTCAACCTGCTGTCGAGCGTCG CGGCCGTGGCGGGCGGGCTGGTCGGGTACTTCCTGCTGGACCAGATGAGCGGCTGGATTCCCTATGTGCTCGTGATCGCG TCCAGCAGCTTCCTCTACATCGCCGTGAGCGACCTGATGCCGCAGATGCAGCGCAAGCCGCGCTGGCGCGAATCGGCGAT TCAGGTGGTGCTCGTGGCGGCCGGCATCACGGCGATCGTCTTCATCACCAATGGCGTCCATGAGCGCCAGGCCCATGGCG GACACCGCCACGCCACGCGGGCGGTGGCGTCCGACTGA
Upstream 100 bases:
>100_bases GCTGCGCCAGCACGGCGTCGTCTAACCGTACTCATAGGCGCTGCGCGGACGAGGATTGCAAAGTCCGCGCCGGAATACGT ACAATGCGGCCTTCCAGTTG
Downstream 100 bases:
>100_bases GCGGTCTCGGCAGGCTCAGGCTGCAGGTCCCGTGGCGACCGGGCGCGTCGGATCGGCGCACCATTCGCTCCACGAGCCCG GATAGAGCGCGGCACCTTCC
Product: Zinc transporter ZIP
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MQHCCVCRPHSAGRNRHAADAAPPPREPIIHSTLLYILLAATISGVGSIFGAALLSLTMASRVVERMVSFSVGVLLATAL LHSLPEAFESGADPRALFGTLLAGLLGFFLLEKISLLRHSHHHEGDGHHHHHGHDREEAGRSGLTILVGDTFHNFADGIV IAAAFLADPNIGIVTALAIAAHEIPQEVGDFIVLLNAGFSKARAFAFNLLSSVAAVAGGLVGYFLLDQMSGWIPYVLVIA SSSFLYIAVSDLMPQMQRKPRWRESAIQVVLVAAGITAIVFITNGVHERQAHGGHRHATRAVASD
Sequences:
>Translated_305_residues MQHCCVCRPHSAGRNRHAADAAPPPREPIIHSTLLYILLAATISGVGSIFGAALLSLTMASRVVERMVSFSVGVLLATAL LHSLPEAFESGADPRALFGTLLAGLLGFFLLEKISLLRHSHHHEGDGHHHHHGHDREEAGRSGLTILVGDTFHNFADGIV IAAAFLADPNIGIVTALAIAAHEIPQEVGDFIVLLNAGFSKARAFAFNLLSSVAAVAGGLVGYFLLDQMSGWIPYVLVIA SSSFLYIAVSDLMPQMQRKPRWRESAIQVVLVAAGITAIVFITNGVHERQAHGGHRHATRAVASD >Mature_305_residues MQHCCVCRPHSAGRNRHAADAAPPPREPIIHSTLLYILLAATISGVGSIFGAALLSLTMASRVVERMVSFSVGVLLATAL LHSLPEAFESGADPRALFGTLLAGLLGFFLLEKISLLRHSHHHEGDGHHHHHGHDREEAGRSGLTILVGDTFHNFADGIV IAAAFLADPNIGIVTALAIAAHEIPQEVGDFIVLLNAGFSKARAFAFNLLSSVAAVAGGLVGYFLLDQMSGWIPYVLVIA SSSFLYIAVSDLMPQMQRKPRWRESAIQVVLVAAGITAIVFITNGVHERQAHGGHRHATRAVASD
Specific function: Mediates zinc uptake. May also transport other divalent cations [H]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily [H]
Homologues:
Organism=Homo sapiens, GI223633937, Length=261, Percent_Identity=31.8007662835249, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI223633939, Length=298, Percent_Identity=29.8657718120805, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI40255101, Length=300, Percent_Identity=28.6666666666667, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI190014617, Length=307, Percent_Identity=28.6644951140065, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI187936949, Length=128, Percent_Identity=38.28125, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI55741750, Length=128, Percent_Identity=38.28125, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI153252201, Length=131, Percent_Identity=35.8778625954198, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI24586665, Length=161, Percent_Identity=33.5403726708075, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI205830403, Length=161, Percent_Identity=33.5403726708075, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI205830407, Length=160, Percent_Identity=33.75, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI205830424, Length=154, Percent_Identity=33.1168831168831, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI190360568, Length=154, Percent_Identity=33.1168831168831, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI190358541, Length=154, Percent_Identity=33.1168831168831, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI205830405, Length=131, Percent_Identity=34.3511450381679, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI117553619, Length=128, Percent_Identity=35.9375, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI117553608, Length=128, Percent_Identity=35.9375, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI153252214, Length=128, Percent_Identity=35.15625, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI115430255, Length=143, Percent_Identity=37.7622377622378, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI115430259, Length=143, Percent_Identity=37.7622377622378, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI205830426, Length=116, Percent_Identity=37.0689655172414, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI206597541, Length=146, Percent_Identity=33.5616438356164, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI206597539, Length=146, Percent_Identity=33.5616438356164, Blast_Score=72, Evalue=9e-13, Organism=Escherichia coli, GI1789419, Length=197, Percent_Identity=26.3959390862944, Blast_Score=63, Evalue=3e-11, Organism=Caenorhabditis elegans, GI193209531, Length=231, Percent_Identity=30.3030303030303, Blast_Score=101, Evalue=5e-22, Organism=Caenorhabditis elegans, GI71992548, Length=134, Percent_Identity=29.8507462686567, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI71994730, Length=277, Percent_Identity=23.826714801444, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI71998183, Length=168, Percent_Identity=31.547619047619, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17538884, Length=109, Percent_Identity=36.697247706422, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI32566718, Length=145, Percent_Identity=26.2068965517241, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI32566720, Length=145, Percent_Identity=26.2068965517241, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322166, Length=241, Percent_Identity=26.5560165975104, Blast_Score=87, Evalue=2e-18, Organism=Drosophila melanogaster, GI24664383, Length=111, Percent_Identity=43.2432432432432, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI161083817, Length=111, Percent_Identity=43.2432432432432, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24651189, Length=279, Percent_Identity=27.2401433691756, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24651193, Length=279, Percent_Identity=27.2401433691756, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24651187, Length=279, Percent_Identity=27.2401433691756, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24651191, Length=279, Percent_Identity=27.2401433691756, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24651195, Length=279, Percent_Identity=27.2401433691756, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24651197, Length=279, Percent_Identity=27.2401433691756, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI45549201, Length=111, Percent_Identity=38.7387387387387, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI17864610, Length=148, Percent_Identity=31.7567567567568, Blast_Score=83, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 32518; Mature: 32518
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHCCVCRPHSAGRNRHAADAAPPPREPIIHSTLLYILLAATISGVGSIFGAALLSLTMA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRVVERMVSFSVGVLLATALLHSLPEAFESGADPRALFGTLLAGLLGFFLLEKISLLRHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHEGDGHHHHHGHDREEAGRSGLTILVGDTFHNFADGIVIAAAFLADPNIGIVTALAIA CCCCCCCCCCCCCCCHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH AHEIPQEVGDFIVLLNAGFSKARAFAFNLLSSVAAVAGGLVGYFLLDQMSGWIPYVLVIA HHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SSSFLYIAVSDLMPQMQRKPRWRESAIQVVLVAAGITAIVFITNGVHERQAHGGHRHATR CCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHH AVASD HHCCC >Mature Secondary Structure MQHCCVCRPHSAGRNRHAADAAPPPREPIIHSTLLYILLAATISGVGSIFGAALLSLTMA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRVVERMVSFSVGVLLATALLHSLPEAFESGADPRALFGTLLAGLLGFFLLEKISLLRHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHEGDGHHHHHGHDREEAGRSGLTILVGDTFHNFADGIVIAAAFLADPNIGIVTALAIA CCCCCCCCCCCCCCCHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH AHEIPQEVGDFIVLLNAGFSKARAFAFNLLSSVAAVAGGLVGYFLLDQMSGWIPYVLVIA HHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SSSFLYIAVSDLMPQMQRKPRWRESAIQVVLVAAGITAIVFITNGVHERQAHGGHRHATR CCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHH AVASD HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA