Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71908012

Identifier: 71908012

GI number: 71908012

Start: 2579610

End: 2580536

Strand: Reverse

Name: 71908012

Synonym: Daro_2393

Alternate gene names: NA

Gene position: 2580536-2579610 (Counterclockwise)

Preceding gene: 71908039

Following gene: 71908009

Centisome position: 57.33

GC content: 47.03

Gene sequence:

>927_bases
ATGATGATTTTAAGTGTAAATATATATGTGGCACGTGATGTGCTTAGAACTTCGCGAGTAGCACATTTGATTAATTCGTT
CATGGAGGTTGTTATGAACACCAAGTCTAAACTTTCGAAGGCCGTTGCAGCTTTGGCTTTCGTTGCAGCTGCTTCTTCCG
TTCAAGCGGCAAATGTTTTTCAGGAATTCACGGTTGCGGAAGGTAGCGTTGCAGGCGCTCTTACTAACACCTTTGTTGCT
GACAAGCTCAATGGCGGTTATGCAGAGTATTTGACCATCAATACGGATCTTACTTTTTCTAGTGTTGCCTACGGGGATAT
TGGTCAATTCTATAAGAATGAGGGATCATCTACGGTATCTTCCCAGCTTGGTTCTTTTACCCCGAATCAGTATGGGATGT
ATGCCTTGTTTGACTCGTCGGGTCTCTTGACGCCGGGCGGGTTCGTGGGGACGGCTGGTAATTTCCACCTGTGGATTGAT
CCGAATTCGGATACCACCAAAACTTTAACGGAAAGCGGTAATGTTGCTTCAGTCGCTCTGACTGGGACCGCTGATGATTA
TGAGATTTTGTTCTCCATCGATCCTACCAAGTTGCTCGGTTTGCCTGGTACGCCTGGGGCATACGATTTTATCTTTAAGG
ATTTGGTATTGACGGCTGCTGGTGGTAGTTACTTTATTGCACCTAGCCCATTCCATGCCGTAGTGGATGTGAATGGCGAT
TTCGATGCCTTTAATGATGTTGTGAATGATGTGAATTCGCGTATCGCAGCTGGGACCTTCACAACAACGACCTATAAGGG
ATCCCAAGGTACGGGTCTCACAGGGGACGTCAGTGCTGTTTTCGTGGTGCCTGAACCTGCATCTCTGGCATTGGTTGGGT
TTGGGTTGTTCGCAGCAGGTATGAGCCGTCGCCGTAAATCTGCTTAA

Upstream 100 bases:

>100_bases
CGCGTGCCTACTTCTACTAAATGCTATTTAGTTGGCCCGATGAAGAGACGTCGGATTTCTTTACACTTGGCCGGGAAATG
AATCTTGTTATTTTTTTAAG

Downstream 100 bases:

>100_bases
ATGGCTTTGCTTTAGTCGGTTAAGCCCATGAGCCTTAAACCCCCTCACGCCCTGCGTGGGGGTTTATAAGATGGGTCAGC
CTGATCCCCGCCAGCGGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MMILSVNIYVARDVLRTSRVAHLINSFMEVVMNTKSKLSKAVAALAFVAAASSVQAANVFQEFTVAEGSVAGALTNTFVA
DKLNGGYAEYLTINTDLTFSSVAYGDIGQFYKNEGSSTVSSQLGSFTPNQYGMYALFDSSGLLTPGGFVGTAGNFHLWID
PNSDTTKTLTESGNVASVALTGTADDYEILFSIDPTKLLGLPGTPGAYDFIFKDLVLTAAGGSYFIAPSPFHAVVDVNGD
FDAFNDVVNDVNSRIAAGTFTTTTYKGSQGTGLTGDVSAVFVVPEPASLALVGFGLFAAGMSRRRKSA

Sequences:

>Translated_308_residues
MMILSVNIYVARDVLRTSRVAHLINSFMEVVMNTKSKLSKAVAALAFVAAASSVQAANVFQEFTVAEGSVAGALTNTFVA
DKLNGGYAEYLTINTDLTFSSVAYGDIGQFYKNEGSSTVSSQLGSFTPNQYGMYALFDSSGLLTPGGFVGTAGNFHLWID
PNSDTTKTLTESGNVASVALTGTADDYEILFSIDPTKLLGLPGTPGAYDFIFKDLVLTAAGGSYFIAPSPFHAVVDVNGD
FDAFNDVVNDVNSRIAAGTFTTTTYKGSQGTGLTGDVSAVFVVPEPASLALVGFGLFAAGMSRRRKSA
>Mature_308_residues
MMILSVNIYVARDVLRTSRVAHLINSFMEVVMNTKSKLSKAVAALAFVAAASSVQAANVFQEFTVAEGSVAGALTNTFVA
DKLNGGYAEYLTINTDLTFSSVAYGDIGQFYKNEGSSTVSSQLGSFTPNQYGMYALFDSSGLLTPGGFVGTAGNFHLWID
PNSDTTKTLTESGNVASVALTGTADDYEILFSIDPTKLLGLPGTPGAYDFIFKDLVLTAAGGSYFIAPSPFHAVVDVNGD
FDAFNDVVNDVNSRIAAGTFTTTTYKGSQGTGLTGDVSAVFVVPEPASLALVGFGLFAAGMSRRRKSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32268; Mature: 32268

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMILSVNIYVARDVLRTSRVAHLINSFMEVVMNTKSKLSKAVAALAFVAAASSVQAANVF
CEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHH
QEFTVAEGSVAGALTNTFVADKLNGGYAEYLTINTDLTFSSVAYGDIGQFYKNEGSSTVS
HHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCHHHHHHCCCCHHHH
SQLGSFTPNQYGMYALFDSSGLLTPGGFVGTAGNFHLWIDPNSDTTKTLTESGNVASVAL
HHHCCCCCCCCCEEEEECCCCCCCCCCCEECCCCEEEEECCCCCCCHHHHCCCCEEEEEE
TGTADDYEILFSIDPTKLLGLPGTPGAYDFIFKDLVLTAAGGSYFIAPSPFHAVVDVNGD
ECCCCCEEEEEEECCHHEEECCCCCCHHHHHHHHHHEEECCCCEEECCCCCEEEEECCCC
FDAFNDVVNDVNSRIAAGTFTTTTYKGSQGTGLTGDVSAVFVVPEPASLALVGFGLFAAG
HHHHHHHHHHHHHHEECCEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEHHHHHHHHHH
MSRRRKSA
HHHHHCCC
>Mature Secondary Structure
MMILSVNIYVARDVLRTSRVAHLINSFMEVVMNTKSKLSKAVAALAFVAAASSVQAANVF
CEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHH
QEFTVAEGSVAGALTNTFVADKLNGGYAEYLTINTDLTFSSVAYGDIGQFYKNEGSSTVS
HHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCHHHHHHCCCCHHHH
SQLGSFTPNQYGMYALFDSSGLLTPGGFVGTAGNFHLWIDPNSDTTKTLTESGNVASVAL
HHHCCCCCCCCCEEEEECCCCCCCCCCCEECCCCEEEEECCCCCCCHHHHCCCCEEEEEE
TGTADDYEILFSIDPTKLLGLPGTPGAYDFIFKDLVLTAAGGSYFIAPSPFHAVVDVNGD
ECCCCCEEEEEEECCHHEEECCCCCCHHHHHHHHHHEEECCCCEEECCCCCEEEEECCCC
FDAFNDVVNDVNSRIAAGTFTTTTYKGSQGTGLTGDVSAVFVVPEPASLALVGFGLFAAG
HHHHHHHHHHHHHHEECCEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEHHHHHHHHHH
MSRRRKSA
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA