| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71908009
Identifier: 71908009
GI number: 71908009
Start: 2576116
End: 2576913
Strand: Reverse
Name: 71908009
Synonym: Daro_2390
Alternate gene names: NA
Gene position: 2576913-2576116 (Counterclockwise)
Preceding gene: 71908012
Following gene: 71908008
Centisome position: 57.25
GC content: 48.87
Gene sequence:
>798_bases ATGCAATCGACAATCGAAAGGCGTTTTTCGATACATTCTGCATTGGTTTTGGTCGGTGCTATATACATGGCAGTCCTATC ATTTCCTTTGCACGCAGAGGAGGCAGGAGCAACGTCGGCTAGTGATGCTTTAGCGCGCAGTATAGTTGAAAAGGCAGACA AAGTTCGATTTCCAGCCGAGGCATTTCAGGTTGACGTGGTCATAAACAGTGTGCGTCCGGACAAGGAGGCTGATCTCCAC AAATATCGCGTTCTCTCCAAGGGAAATGAGAACGCAGTAGTGATGGTTACTGAGCCCGCTTCGGAGCGTGGTCAGATCAT CTTGATGAAGGGCCGTGACCTGTGGGTCTTTATGCCGGAAGTTTCACAGCCGGTGCGGATTTCCTTGGCCCAGCGCCTGA CTGGGCAGGTGGCAAACGGCGATCTGGCACGGGCTAATTTTTCTGGGGATTACAATCCGAAAATTATCAGCACCGAGAAA ATTGGCGGTGAAAGCTATCACGTACTGGAGTTAATTGCCGTTGATCGTAGTGTGACTTATCAACGTGTGGTTTATTGGGT TAATGAAAAGTCAGGTTGGCCCTTGAAAGCTGAGTTTTATTCGCTATCCAACCGGCTGTTGAAAAAATGCACCTATGAAA ATTTCCAGACCATGGCTGGGCGAGTGCGTCCGACGCGGCTGGTAATGGAGGATGCGCTGCGCAATGGAGAGAAGTCAGTG CTTGAGTATAGCGAGATGAAGTTACGTGATTTGCCGGACAAGATTTTTACCAAGGAGTATCTGAAGAAACTGGATTAG
Upstream 100 bases:
>100_bases TCGCCAAGCTGATAGTCCTTGTAAACATGTTCAATACGAACGACGCTCATGGCATTAGGTGGGCAACTAATTGAAGGTTC TGAACTGGATGGAGCTACTC
Downstream 100 bases:
>100_bases TATGCTTTTTGGTTATTCTTCTATTTGGTTGAAAGTTTTTGAAAATGACGCAAGTGATACCCGTTGTGCTCTCCGGAGGT TCTGGAACCCGTTTGTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MQSTIERRFSIHSALVLVGAIYMAVLSFPLHAEEAGATSASDALARSIVEKADKVRFPAEAFQVDVVINSVRPDKEADLH KYRVLSKGNENAVVMVTEPASERGQIILMKGRDLWVFMPEVSQPVRISLAQRLTGQVANGDLARANFSGDYNPKIISTEK IGGESYHVLELIAVDRSVTYQRVVYWVNEKSGWPLKAEFYSLSNRLLKKCTYENFQTMAGRVRPTRLVMEDALRNGEKSV LEYSEMKLRDLPDKIFTKEYLKKLD
Sequences:
>Translated_265_residues MQSTIERRFSIHSALVLVGAIYMAVLSFPLHAEEAGATSASDALARSIVEKADKVRFPAEAFQVDVVINSVRPDKEADLH KYRVLSKGNENAVVMVTEPASERGQIILMKGRDLWVFMPEVSQPVRISLAQRLTGQVANGDLARANFSGDYNPKIISTEK IGGESYHVLELIAVDRSVTYQRVVYWVNEKSGWPLKAEFYSLSNRLLKKCTYENFQTMAGRVRPTRLVMEDALRNGEKSV LEYSEMKLRDLPDKIFTKEYLKKLD >Mature_265_residues MQSTIERRFSIHSALVLVGAIYMAVLSFPLHAEEAGATSASDALARSIVEKADKVRFPAEAFQVDVVINSVRPDKEADLH KYRVLSKGNENAVVMVTEPASERGQIILMKGRDLWVFMPEVSQPVRISLAQRLTGQVANGDLARANFSGDYNPKIISTEK IGGESYHVLELIAVDRSVTYQRVVYWVNEKSGWPLKAEFYSLSNRLLKKCTYENFQTMAGRVRPTRLVMEDALRNGEKSV LEYSEMKLRDLPDKIFTKEYLKKLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29948; Mature: 29948
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSTIERRFSIHSALVLVGAIYMAVLSFPLHAEEAGATSASDALARSIVEKADKVRFPAE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCHH AFQVDVVINSVRPDKEADLHKYRVLSKGNENAVVMVTEPASERGQIILMKGRDLWVFMPE HEEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCEEEEECCC VSQPVRISLAQRLTGQVANGDLARANFSGDYNPKIISTEKIGGESYHVLELIAVDRSVTY CCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCE QRVVYWVNEKSGWPLKAEFYSLSNRLLKKCTYENFQTMAGRVRPTRLVMEDALRNGEKSV EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH LEYSEMKLRDLPDKIFTKEYLKKLD HHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MQSTIERRFSIHSALVLVGAIYMAVLSFPLHAEEAGATSASDALARSIVEKADKVRFPAE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCHH AFQVDVVINSVRPDKEADLHKYRVLSKGNENAVVMVTEPASERGQIILMKGRDLWVFMPE HEEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCEEEEECCC VSQPVRISLAQRLTGQVANGDLARANFSGDYNPKIISTEKIGGESYHVLELIAVDRSVTY CCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCE QRVVYWVNEKSGWPLKAEFYSLSNRLLKKCTYENFQTMAGRVRPTRLVMEDALRNGEKSV EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH LEYSEMKLRDLPDKIFTKEYLKKLD HHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA