Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71908009

Identifier: 71908009

GI number: 71908009

Start: 2576116

End: 2576913

Strand: Reverse

Name: 71908009

Synonym: Daro_2390

Alternate gene names: NA

Gene position: 2576913-2576116 (Counterclockwise)

Preceding gene: 71908012

Following gene: 71908008

Centisome position: 57.25

GC content: 48.87

Gene sequence:

>798_bases
ATGCAATCGACAATCGAAAGGCGTTTTTCGATACATTCTGCATTGGTTTTGGTCGGTGCTATATACATGGCAGTCCTATC
ATTTCCTTTGCACGCAGAGGAGGCAGGAGCAACGTCGGCTAGTGATGCTTTAGCGCGCAGTATAGTTGAAAAGGCAGACA
AAGTTCGATTTCCAGCCGAGGCATTTCAGGTTGACGTGGTCATAAACAGTGTGCGTCCGGACAAGGAGGCTGATCTCCAC
AAATATCGCGTTCTCTCCAAGGGAAATGAGAACGCAGTAGTGATGGTTACTGAGCCCGCTTCGGAGCGTGGTCAGATCAT
CTTGATGAAGGGCCGTGACCTGTGGGTCTTTATGCCGGAAGTTTCACAGCCGGTGCGGATTTCCTTGGCCCAGCGCCTGA
CTGGGCAGGTGGCAAACGGCGATCTGGCACGGGCTAATTTTTCTGGGGATTACAATCCGAAAATTATCAGCACCGAGAAA
ATTGGCGGTGAAAGCTATCACGTACTGGAGTTAATTGCCGTTGATCGTAGTGTGACTTATCAACGTGTGGTTTATTGGGT
TAATGAAAAGTCAGGTTGGCCCTTGAAAGCTGAGTTTTATTCGCTATCCAACCGGCTGTTGAAAAAATGCACCTATGAAA
ATTTCCAGACCATGGCTGGGCGAGTGCGTCCGACGCGGCTGGTAATGGAGGATGCGCTGCGCAATGGAGAGAAGTCAGTG
CTTGAGTATAGCGAGATGAAGTTACGTGATTTGCCGGACAAGATTTTTACCAAGGAGTATCTGAAGAAACTGGATTAG

Upstream 100 bases:

>100_bases
TCGCCAAGCTGATAGTCCTTGTAAACATGTTCAATACGAACGACGCTCATGGCATTAGGTGGGCAACTAATTGAAGGTTC
TGAACTGGATGGAGCTACTC

Downstream 100 bases:

>100_bases
TATGCTTTTTGGTTATTCTTCTATTTGGTTGAAAGTTTTTGAAAATGACGCAAGTGATACCCGTTGTGCTCTCCGGAGGT
TCTGGAACCCGTTTGTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MQSTIERRFSIHSALVLVGAIYMAVLSFPLHAEEAGATSASDALARSIVEKADKVRFPAEAFQVDVVINSVRPDKEADLH
KYRVLSKGNENAVVMVTEPASERGQIILMKGRDLWVFMPEVSQPVRISLAQRLTGQVANGDLARANFSGDYNPKIISTEK
IGGESYHVLELIAVDRSVTYQRVVYWVNEKSGWPLKAEFYSLSNRLLKKCTYENFQTMAGRVRPTRLVMEDALRNGEKSV
LEYSEMKLRDLPDKIFTKEYLKKLD

Sequences:

>Translated_265_residues
MQSTIERRFSIHSALVLVGAIYMAVLSFPLHAEEAGATSASDALARSIVEKADKVRFPAEAFQVDVVINSVRPDKEADLH
KYRVLSKGNENAVVMVTEPASERGQIILMKGRDLWVFMPEVSQPVRISLAQRLTGQVANGDLARANFSGDYNPKIISTEK
IGGESYHVLELIAVDRSVTYQRVVYWVNEKSGWPLKAEFYSLSNRLLKKCTYENFQTMAGRVRPTRLVMEDALRNGEKSV
LEYSEMKLRDLPDKIFTKEYLKKLD
>Mature_265_residues
MQSTIERRFSIHSALVLVGAIYMAVLSFPLHAEEAGATSASDALARSIVEKADKVRFPAEAFQVDVVINSVRPDKEADLH
KYRVLSKGNENAVVMVTEPASERGQIILMKGRDLWVFMPEVSQPVRISLAQRLTGQVANGDLARANFSGDYNPKIISTEK
IGGESYHVLELIAVDRSVTYQRVVYWVNEKSGWPLKAEFYSLSNRLLKKCTYENFQTMAGRVRPTRLVMEDALRNGEKSV
LEYSEMKLRDLPDKIFTKEYLKKLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29948; Mature: 29948

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSTIERRFSIHSALVLVGAIYMAVLSFPLHAEEAGATSASDALARSIVEKADKVRFPAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCHH
AFQVDVVINSVRPDKEADLHKYRVLSKGNENAVVMVTEPASERGQIILMKGRDLWVFMPE
HEEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCEEEEECCC
VSQPVRISLAQRLTGQVANGDLARANFSGDYNPKIISTEKIGGESYHVLELIAVDRSVTY
CCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCE
QRVVYWVNEKSGWPLKAEFYSLSNRLLKKCTYENFQTMAGRVRPTRLVMEDALRNGEKSV
EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH
LEYSEMKLRDLPDKIFTKEYLKKLD
HHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MQSTIERRFSIHSALVLVGAIYMAVLSFPLHAEEAGATSASDALARSIVEKADKVRFPAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCHH
AFQVDVVINSVRPDKEADLHKYRVLSKGNENAVVMVTEPASERGQIILMKGRDLWVFMPE
HEEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCEEEEECCC
VSQPVRISLAQRLTGQVANGDLARANFSGDYNPKIISTEKIGGESYHVLELIAVDRSVTY
CCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCE
QRVVYWVNEKSGWPLKAEFYSLSNRLLKKCTYENFQTMAGRVRPTRLVMEDALRNGEKSV
EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH
LEYSEMKLRDLPDKIFTKEYLKKLD
HHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA