Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71908039

Identifier: 71908039

GI number: 71908039

Start: 2613314

End: 2614513

Strand: Reverse

Name: 71908039

Synonym: Daro_2420

Alternate gene names: NA

Gene position: 2614513-2613314 (Counterclockwise)

Preceding gene: 71908040

Following gene: 71908012

Centisome position: 58.09

GC content: 51.08

Gene sequence:

>1200_bases
ATGACCGCCAAGAAATTCGTTTTCATTCTGGCTGCGCTCAATCTTCCGGCCATGCTGTTAATCAGCGCCCTCAATTTCGT
CATCGACGGGGATTCAAGCCGGCATCTCCCAGGTGAACCCAGTATTTTCCCCCGTAGCACCAATCATTCCGCGCTTTCAA
AACTGCACTATCTTTCGTTGGAAAAGCCGGAGGTCATTTATTTTGGATCTTCGCGAACCGAAATAGGCCTGCCGGCAGAT
CCTGCGTTGATTGGAGGGAAAACCGTGTACAACGCAGGGCTGTCAGCGAACACGTTGGGAAACACGCTTCCATTGATACA
GCACGTTCTGGCGATATCCGAGCCCAAGGCCATTGTTCTCGGAGTTGATTTTGTATCTTTTTTGCCCAAACCCAGCACCT
TTTCCAATCTGGACATGTCGCTGCTGTCCTCGGGTATCACAGAATATCGCTTCAAGCGCTTGTTCCATGACATCAAGCGA
ACCTTAACGATTGAAACGACAGCAAATTCAATACATTCACTCTCTGCACTCTGTGCAGGCAAGCCTTACGATGAGATTGA
CGGGCTGGCATCAATTGGCGGCCAGACCAGCGACGCCGAAATGGAGTTGCTGACAACTGTTCGCGGAAAATCCCTAACCG
CCTTCCAACGGAAGCTTCAGATGGCTGCCGGACGCCCCCCAGATTGGAAAACAATCGAAAATGGGCTTCATATGCTGGAC
AATTTCGTCGATTTTGCCTGTCGGCGCCATATCACAGTCAGAATTTACACAAACCCCAGGCATGCACTTGCCGAGCAGAT
GCTCGAGCAAAATGGTGCGTGGCCTCAGGTTGAGCGCTGGAAGAGTGCATTGGGGGAGATCGCCACGCGCTATCAACCGC
AATGCGACATCAGAATTTTTGATTTCTCAGGCTACAACAGCGTTACTACTGAGTCCGCTGTTGGCCTGGCGCCTAGCAAG
GGCATGACTCATTACTGGGAAGCGTCACATTACAAGAGTGTAGTAGGGGCAATGATTCTTCACCGCCTGTTCACTACCGA
TAGCTCATCCCTGCCTCCCGACTTTGGTCGCGAACTTACAAAAGACAGTACGGACAAGGTCAATGCCCTAGTGCGGAAGG
AGCAGCAGGATTACATTAGGGCCCACGCAAACGAAATTGCCAAGGCCAATCAATGGGCATCAGCCAGCCAAAAATATTGA

Upstream 100 bases:

>100_bases
CCTTCATCTTACTGGGCGCTGGCTCTCACCATCGGTTTCTTCAGTTGCGTATTTAGCCTTAATCGCGCAACTGAATTTCT
ATACTTCCAGTTTTGAACCA

Downstream 100 bases:

>100_bases
GTTCCAAGCAAGCGCTGCTTTCAATGCGACATCCGCGAACTGTAATCGTTTTCCCGATATCCAGATATTCTGAAAAATGT
CTCGGCCTCAGCTAGAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MTAKKFVFILAALNLPAMLLISALNFVIDGDSSRHLPGEPSIFPRSTNHSALSKLHYLSLEKPEVIYFGSSRTEIGLPAD
PALIGGKTVYNAGLSANTLGNTLPLIQHVLAISEPKAIVLGVDFVSFLPKPSTFSNLDMSLLSSGITEYRFKRLFHDIKR
TLTIETTANSIHSLSALCAGKPYDEIDGLASIGGQTSDAEMELLTTVRGKSLTAFQRKLQMAAGRPPDWKTIENGLHMLD
NFVDFACRRHITVRIYTNPRHALAEQMLEQNGAWPQVERWKSALGEIATRYQPQCDIRIFDFSGYNSVTTESAVGLAPSK
GMTHYWEASHYKSVVGAMILHRLFTTDSSSLPPDFGRELTKDSTDKVNALVRKEQQDYIRAHANEIAKANQWASASQKY

Sequences:

>Translated_399_residues
MTAKKFVFILAALNLPAMLLISALNFVIDGDSSRHLPGEPSIFPRSTNHSALSKLHYLSLEKPEVIYFGSSRTEIGLPAD
PALIGGKTVYNAGLSANTLGNTLPLIQHVLAISEPKAIVLGVDFVSFLPKPSTFSNLDMSLLSSGITEYRFKRLFHDIKR
TLTIETTANSIHSLSALCAGKPYDEIDGLASIGGQTSDAEMELLTTVRGKSLTAFQRKLQMAAGRPPDWKTIENGLHMLD
NFVDFACRRHITVRIYTNPRHALAEQMLEQNGAWPQVERWKSALGEIATRYQPQCDIRIFDFSGYNSVTTESAVGLAPSK
GMTHYWEASHYKSVVGAMILHRLFTTDSSSLPPDFGRELTKDSTDKVNALVRKEQQDYIRAHANEIAKANQWASASQKY
>Mature_398_residues
TAKKFVFILAALNLPAMLLISALNFVIDGDSSRHLPGEPSIFPRSTNHSALSKLHYLSLEKPEVIYFGSSRTEIGLPADP
ALIGGKTVYNAGLSANTLGNTLPLIQHVLAISEPKAIVLGVDFVSFLPKPSTFSNLDMSLLSSGITEYRFKRLFHDIKRT
LTIETTANSIHSLSALCAGKPYDEIDGLASIGGQTSDAEMELLTTVRGKSLTAFQRKLQMAAGRPPDWKTIENGLHMLDN
FVDFACRRHITVRIYTNPRHALAEQMLEQNGAWPQVERWKSALGEIATRYQPQCDIRIFDFSGYNSVTTESAVGLAPSKG
MTHYWEASHYKSVVGAMILHRLFTTDSSSLPPDFGRELTKDSTDKVNALVRKEQQDYIRAHANEIAKANQWASASQKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44131; Mature: 44000

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAKKFVFILAALNLPAMLLISALNFVIDGDSSRHLPGEPSIFPRSTNHSALSKLHYLSL
CCCHHHHHHHHHHCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
EKPEVIYFGSSRTEIGLPADPALIGGKTVYNAGLSANTLGNTLPLIQHVLAISEPKAIVL
CCCCEEEECCCCCCCCCCCCCCEECCCHHEECCCCCCCCCHHHHHHHHHHHCCCCCEEEE
GVDFVSFLPKPSTFSNLDMSLLSSGITEYRFKRLFHDIKRTLTIETTANSIHSLSALCAG
EEHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCC
KPYDEIDGLASIGGQTSDAEMELLTTVRGKSLTAFQRKLQMAAGRPPDWKTIENGLHMLD
CCHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
NFVDFACRRHITVRIYTNPRHALAEQMLEQNGAWPQVERWKSALGEIATRYQPQCDIRIF
HHHHHHHHCCEEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE
DFSGYNSVTTESAVGLAPSKGMTHYWEASHYKSVVGAMILHRLFTTDSSSLPPDFGRELT
EECCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHC
KDSTDKVNALVRKEQQDYIRAHANEIAKANQWASASQKY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TAKKFVFILAALNLPAMLLISALNFVIDGDSSRHLPGEPSIFPRSTNHSALSKLHYLSL
CCHHHHHHHHHHCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
EKPEVIYFGSSRTEIGLPADPALIGGKTVYNAGLSANTLGNTLPLIQHVLAISEPKAIVL
CCCCEEEECCCCCCCCCCCCCCEECCCHHEECCCCCCCCCHHHHHHHHHHHCCCCCEEEE
GVDFVSFLPKPSTFSNLDMSLLSSGITEYRFKRLFHDIKRTLTIETTANSIHSLSALCAG
EEHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCC
KPYDEIDGLASIGGQTSDAEMELLTTVRGKSLTAFQRKLQMAAGRPPDWKTIENGLHMLD
CCHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
NFVDFACRRHITVRIYTNPRHALAEQMLEQNGAWPQVERWKSALGEIATRYQPQCDIRIF
HHHHHHHHCCEEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE
DFSGYNSVTTESAVGLAPSKGMTHYWEASHYKSVVGAMILHRLFTTDSSSLPPDFGRELT
EECCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHC
KDSTDKVNALVRKEQQDYIRAHANEIAKANQWASASQKY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA