| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906943
Identifier: 71906943
GI number: 71906943
Start: 1422983
End: 1424707
Strand: Reverse
Name: 71906943
Synonym: Daro_1309
Alternate gene names: NA
Gene position: 1424707-1422983 (Counterclockwise)
Preceding gene: 71906944
Following gene: 71906940
Centisome position: 31.65
GC content: 56.52
Gene sequence:
>1725_bases ATGGTCCTCCGTCCATCGCTCTACGCCGTCTCGACCTCGGTCGGTTCGGGCAAAACCCGCGCTGCCATCGAATATATCGC CAGCCCCGAAGTCAGCACCCAGAACTTCATCTACGTCGCCCCCACGATCCGCCTCGTCAACCAGACAGCGGACAACCTGA GAAAGCGCTTGGATGCCGCCTATGGTTCTGCTGCAAGGAACCTTCACCTGATCCATTCCGAATCCCGCCACAACGACGAT TTACCCACCTCGGCGGAAACGCTGGCAGTGATCAATGAGGCTATCGGTAATATCGGGAAGATCGTGATCGTGACGACCAA GACCTTTCTGACCATCCTGCCGGAGATCGCCAAGAAGCATCAGTGGCGGGTCATCATGGATGAAGCGTTCGCCCCGGTCG AGTTTCTCAATTTCTATCTTGGCAACAAGGTCATGGAAGGCTTGAGCTACTTCAAGGAGGCTTTCACGGTAGATCGCGAC GACAACAACCGCATCCTTCCGGCAGAAGGGAAAGCTGGCAGGGTCAGGGAAATCGCTTCTGGAAACATCAAGCGATCCGG GCAACGCTACAAGGGATTGCAACCCTTTGCGGCAGCGGTCGCCAATCCTGCGGTTCGCTGTGAACTGGTGCTGACCTCCA AGGTCAAAGCCATCCTTGACTCCGATGGTGACGACACCCAAGGCTATCCGGCACTGGCCGTCGATAATCAGGCGGAGTCG GTTATGTTGATTGCCAGCTACGTCACCCCGGAGCACTTCCAAGGATTCGACGAGGCCATTTTCATGTCCGCGCTGTTCGA GCACACCATGCTCTACCACCTGTGGACGCGGGTGTTCGGTATCCGCTTCATGAGCCATCCCCGTTTCAGCAAGGGACGTC TTCGGGACATCCACCGTGAGCAAGGCAAGTACGTCGCCATCGGCCACCTTCTGCATCCGGACGACAGAAGCAGCAAATAC AACCTTTCCCGGAATATCTTCACTGGCGCCCCGGATGAGCGAGAGCCCGGCCAACGGGTTATAGACAAGATGGTCAGTAT TAGCTCTCAGTATTTCGAGGGTGTACCGTATTTGTTGCAGGTGAACAATGGCTACGACTACGAGGAAGGAAGTTCTCTGC TGCCACCGAATGGAGTCAGGATTCCCACCTTGAGCCACGGCTTGAATGAGTTCCAGGACTGCAATCATGTCGCCGCACTG GCTATCACCAACCCGATTCCCCAAGAGGCAGAATGGATCATGGCACGTACCGGCCTGAGCTTCGAGGAGACACAGATGGC CTACCGCATCCATACGACCTATCAGGCTGTCGGGCGCAGTTCTATCCGTAAGGCAACGCCAAGTGACGACATGAAGGTTT TCCTTGCATCTGGCTATCAGGAAGCCTGGATGCTGCACCAGCGGTTTGTGGGGTCGCAGTGGCTGGGACAGGTTGGCGAC ATGCCTTCGTTGCGTCAGTTATCCGCAGAAGGTCGCGAAGGTGGCCTGATCATGGACCTAGCATCCCTAATCCTTGAACA CCTCGGGTCACTTCCGGCTGACACGGACAGCATTTCCTCCCGTGCCCTGAAAGCCAAGCTCGCCCCTGAATGCAAGGGAA GGACTTGGAGTTCCGCAGCCGCACTTGCTGGGCAAAACTGCTGGGAATGGACCAAGGCTGGACAATCGTTCATCCGCCGG GACCAATGCGATCCGTCGTCTGGTGAGGTTGCACTGGCAGCTTAA
Upstream 100 bases:
>100_bases TTGACGCACTGATCGAGGTCGCCAACCAACTACGAGCCAGGAATGGCAGCCTCACCTCTGCTGACACCGAAGTCGCTGTT GCTGCGAAGGGGGTGATCTG
Downstream 100 bases:
>100_bases TCGCCAAACCCCGCACGATTAACCAGAGGTAGTTATGGTTCTGAATGCGACGTTTGGGGCCACCTACTATCATCCACGAC CATGTCGGCACCACCCGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 574; Mature: 574
Protein sequence:
>574_residues MVLRPSLYAVSTSVGSGKTRAAIEYIASPEVSTQNFIYVAPTIRLVNQTADNLRKRLDAAYGSAARNLHLIHSESRHNDD LPTSAETLAVINEAIGNIGKIVIVTTKTFLTILPEIAKKHQWRVIMDEAFAPVEFLNFYLGNKVMEGLSYFKEAFTVDRD DNNRILPAEGKAGRVREIASGNIKRSGQRYKGLQPFAAAVANPAVRCELVLTSKVKAILDSDGDDTQGYPALAVDNQAES VMLIASYVTPEHFQGFDEAIFMSALFEHTMLYHLWTRVFGIRFMSHPRFSKGRLRDIHREQGKYVAIGHLLHPDDRSSKY NLSRNIFTGAPDEREPGQRVIDKMVSISSQYFEGVPYLLQVNNGYDYEEGSSLLPPNGVRIPTLSHGLNEFQDCNHVAAL AITNPIPQEAEWIMARTGLSFEETQMAYRIHTTYQAVGRSSIRKATPSDDMKVFLASGYQEAWMLHQRFVGSQWLGQVGD MPSLRQLSAEGREGGLIMDLASLILEHLGSLPADTDSISSRALKAKLAPECKGRTWSSAAALAGQNCWEWTKAGQSFIRR DQCDPSSGEVALAA
Sequences:
>Translated_574_residues MVLRPSLYAVSTSVGSGKTRAAIEYIASPEVSTQNFIYVAPTIRLVNQTADNLRKRLDAAYGSAARNLHLIHSESRHNDD LPTSAETLAVINEAIGNIGKIVIVTTKTFLTILPEIAKKHQWRVIMDEAFAPVEFLNFYLGNKVMEGLSYFKEAFTVDRD DNNRILPAEGKAGRVREIASGNIKRSGQRYKGLQPFAAAVANPAVRCELVLTSKVKAILDSDGDDTQGYPALAVDNQAES VMLIASYVTPEHFQGFDEAIFMSALFEHTMLYHLWTRVFGIRFMSHPRFSKGRLRDIHREQGKYVAIGHLLHPDDRSSKY NLSRNIFTGAPDEREPGQRVIDKMVSISSQYFEGVPYLLQVNNGYDYEEGSSLLPPNGVRIPTLSHGLNEFQDCNHVAAL AITNPIPQEAEWIMARTGLSFEETQMAYRIHTTYQAVGRSSIRKATPSDDMKVFLASGYQEAWMLHQRFVGSQWLGQVGD MPSLRQLSAEGREGGLIMDLASLILEHLGSLPADTDSISSRALKAKLAPECKGRTWSSAAALAGQNCWEWTKAGQSFIRR DQCDPSSGEVALAA >Mature_574_residues MVLRPSLYAVSTSVGSGKTRAAIEYIASPEVSTQNFIYVAPTIRLVNQTADNLRKRLDAAYGSAARNLHLIHSESRHNDD LPTSAETLAVINEAIGNIGKIVIVTTKTFLTILPEIAKKHQWRVIMDEAFAPVEFLNFYLGNKVMEGLSYFKEAFTVDRD DNNRILPAEGKAGRVREIASGNIKRSGQRYKGLQPFAAAVANPAVRCELVLTSKVKAILDSDGDDTQGYPALAVDNQAES VMLIASYVTPEHFQGFDEAIFMSALFEHTMLYHLWTRVFGIRFMSHPRFSKGRLRDIHREQGKYVAIGHLLHPDDRSSKY NLSRNIFTGAPDEREPGQRVIDKMVSISSQYFEGVPYLLQVNNGYDYEEGSSLLPPNGVRIPTLSHGLNEFQDCNHVAAL AITNPIPQEAEWIMARTGLSFEETQMAYRIHTTYQAVGRSSIRKATPSDDMKVFLASGYQEAWMLHQRFVGSQWLGQVGD MPSLRQLSAEGREGGLIMDLASLILEHLGSLPADTDSISSRALKAKLAPECKGRTWSSAAALAGQNCWEWTKAGQSFIRR DQCDPSSGEVALAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63632; Mature: 63632
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLRPSLYAVSTSVGSGKTRAAIEYIASPEVSTQNFIYVAPTIRLVNQTADNLRKRLDAA CCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH YGSAARNLHLIHSESRHNDDLPTSAETLAVINEAIGNIGKIVIVTTKTFLTILPEIAKKH HCHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHCC QWRVIMDEAFAPVEFLNFYLGNKVMEGLSYFKEAFTVDRDDNNRILPAEGKAGRVREIAS CCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHC GNIKRSGQRYKGLQPFAAAVANPAVRCELVLTSKVKAILDSDGDDTQGYPALAVDNQAES CCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCEEEECCCCCC VMLIASYVTPEHFQGFDEAIFMSALFEHTMLYHLWTRVFGIRFMSHPRFSKGRLRDIHRE EEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH QGKYVAIGHLLHPDDRSSKYNLSRNIFTGAPDEREPGQRVIDKMVSISSQYFEGVPYLLQ CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE VNNGYDYEEGSSLLPPNGVRIPTLSHGLNEFQDCNHVAALAITNPIPQEAEWIMARTGLS ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCC FEETQMAYRIHTTYQAVGRSSIRKATPSDDMKVFLASGYQEAWMLHQRFVGSQWLGQVGD HHHHHHEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCHHHHHHHCC MPSLRQLSAEGREGGLIMDLASLILEHLGSLPADTDSISSRALKAKLAPECKGRTWSSAA CCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHH ALAGQNCWEWTKAGQSFIRRDQCDPSSGEVALAA HHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEC >Mature Secondary Structure MVLRPSLYAVSTSVGSGKTRAAIEYIASPEVSTQNFIYVAPTIRLVNQTADNLRKRLDAA CCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH YGSAARNLHLIHSESRHNDDLPTSAETLAVINEAIGNIGKIVIVTTKTFLTILPEIAKKH HCHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHCC QWRVIMDEAFAPVEFLNFYLGNKVMEGLSYFKEAFTVDRDDNNRILPAEGKAGRVREIAS CCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHC GNIKRSGQRYKGLQPFAAAVANPAVRCELVLTSKVKAILDSDGDDTQGYPALAVDNQAES CCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCEEEECCCCCC VMLIASYVTPEHFQGFDEAIFMSALFEHTMLYHLWTRVFGIRFMSHPRFSKGRLRDIHRE EEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH QGKYVAIGHLLHPDDRSSKYNLSRNIFTGAPDEREPGQRVIDKMVSISSQYFEGVPYLLQ CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE VNNGYDYEEGSSLLPPNGVRIPTLSHGLNEFQDCNHVAALAITNPIPQEAEWIMARTGLS ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCC FEETQMAYRIHTTYQAVGRSSIRKATPSDDMKVFLASGYQEAWMLHQRFVGSQWLGQVGD HHHHHHEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCHHHHHHHCC MPSLRQLSAEGREGGLIMDLASLILEHLGSLPADTDSISSRALKAKLAPECKGRTWSSAA CCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHH ALAGQNCWEWTKAGQSFIRRDQCDPSSGEVALAA HHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA