| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906944
Identifier: 71906944
GI number: 71906944
Start: 1425086
End: 1425727
Strand: Reverse
Name: 71906944
Synonym: Daro_1310
Alternate gene names: NA
Gene position: 1425727-1425086 (Counterclockwise)
Preceding gene: 71906945
Following gene: 71906943
Centisome position: 31.68
GC content: 52.49
Gene sequence:
>642_bases ATGAGTAATCGAAGCTGGATTGACGAGCATTCCAAGGGCTGGCCGAAATGGTCCGATGTGTATGAGTTGTGGGAAAAGGC CAATGTCCCTGAAGTAAAGGAAGTCCCATTTCAACTTGGGGAGCACTACCCTTCACTTCCTTGGGTTGAGTTGTCTAGCG GGCGACAGGTCGATCAGGGCGCTCGTCCGACCGATGACACTGCATATCATCTGATCAGGCACCTGAAAGGCAAACATAAC GAACTCAAGACCGCCTACAAGTTGTTTGCCTATTGTCGCTCACAATACCTCTCCGGGTTTTCGTCGTATGTGCTCGCACC AGCAATGGAGCGGCACGGTGAAAATCTACAAGGGTGGTGGCACTCCAATGCTAGGAATGTTCTTCCATGGCACGGAAATG ATCGGTCAAGGTTCGATAGCGACAAGAGGACTCAAGAGCAGAGAACGCACTGGCGAGAACTCGTTCAGGATGCTGCAAAG GCGTGGCAGCAGATCGTCGAACACTGGGGGATCGTCCAAACACCAGACCTGATGGGCAGGGATTCACCGGAATACAAAGC ATACGAAGCCCATTGTCGTGCCGCACAGGTAGAGCGCGAGCGAAAAGAGTACGAGCGGCTTAAGGAAAAGTTTGGGCAGT AG
Upstream 100 bases:
>100_bases GATAGCGATGGAGAGCACGCGTTTATCCGCGCCGGATCGATTGCTCTTTTGTCCGTTCCACTTGCTGTATTGGAGCCACT AGATCGCGATGAGGATGAGG
Downstream 100 bases:
>100_bases CCTCCAAGATTCGTAGGGATTCGATTCCTACACACCATAGGAGATCACGGCCGAAATCGCCGGCCTGACCTCTCCAGCCA ACCCAATCACGACCTCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSNRSWIDEHSKGWPKWSDVYELWEKANVPEVKEVPFQLGEHYPSLPWVELSSGRQVDQGARPTDDTAYHLIRHLKGKHN ELKTAYKLFAYCRSQYLSGFSSYVLAPAMERHGENLQGWWHSNARNVLPWHGNDRSRFDSDKRTQEQRTHWRELVQDAAK AWQQIVEHWGIVQTPDLMGRDSPEYKAYEAHCRAAQVERERKEYERLKEKFGQ
Sequences:
>Translated_213_residues MSNRSWIDEHSKGWPKWSDVYELWEKANVPEVKEVPFQLGEHYPSLPWVELSSGRQVDQGARPTDDTAYHLIRHLKGKHN ELKTAYKLFAYCRSQYLSGFSSYVLAPAMERHGENLQGWWHSNARNVLPWHGNDRSRFDSDKRTQEQRTHWRELVQDAAK AWQQIVEHWGIVQTPDLMGRDSPEYKAYEAHCRAAQVERERKEYERLKEKFGQ >Mature_212_residues SNRSWIDEHSKGWPKWSDVYELWEKANVPEVKEVPFQLGEHYPSLPWVELSSGRQVDQGARPTDDTAYHLIRHLKGKHNE LKTAYKLFAYCRSQYLSGFSSYVLAPAMERHGENLQGWWHSNARNVLPWHGNDRSRFDSDKRTQEQRTHWRELVQDAAKA WQQIVEHWGIVQTPDLMGRDSPEYKAYEAHCRAAQVERERKEYERLKEKFGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25279; Mature: 25148
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRSWIDEHSKGWPKWSDVYELWEKANVPEVKEVPFQLGEHYPSLPWVELSSGRQVDQG CCCCCCCCHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCC ARPTDDTAYHLIRHLKGKHNELKTAYKLFAYCRSQYLSGFSSYVLAPAMERHGENLQGWW CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH HSNARNVLPWHGNDRSRFDSDKRTQEQRTHWRELVQDAAKAWQQIVEHWGIVQTPDLMGR CCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCC DSPEYKAYEAHCRAAQVERERKEYERLKEKFGQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNRSWIDEHSKGWPKWSDVYELWEKANVPEVKEVPFQLGEHYPSLPWVELSSGRQVDQG CCCCCCCHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCC ARPTDDTAYHLIRHLKGKHNELKTAYKLFAYCRSQYLSGFSSYVLAPAMERHGENLQGWW CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH HSNARNVLPWHGNDRSRFDSDKRTQEQRTHWRELVQDAAKAWQQIVEHWGIVQTPDLMGR CCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCC DSPEYKAYEAHCRAAQVERERKEYERLKEKFGQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA