| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906940
Identifier: 71906940
GI number: 71906940
Start: 1417994
End: 1418296
Strand: Reverse
Name: 71906940
Synonym: Daro_1306
Alternate gene names: NA
Gene position: 1418296-1417994 (Counterclockwise)
Preceding gene: 71906943
Following gene: 71906939
Centisome position: 31.51
GC content: 58.75
Gene sequence:
>303_bases ATGAGAAGACCTCGCCGTAACCACACAGCCGCCTTCAAGGCCAAAGTGGCGATTGCCGCCCTCAAGGGTGACGAGACGCT GGCCACGTTAGCGGAGAAATTTGATGTTCATCCGAATCAAATCACGCAGTGGAAGACGCAACTGCTCGAGAACGCCTCGG GTGTCTTTGCGACGGCTGCCGAGAAGCAGGCGGCCACGCCGGACCTGAAGGATTTGCATGCAAAGATCGGCCAGCAGGCG TTGGAGATCGATTTTTTGGCCGGCGCGCTCGGTCGCATCGGCGATGCGAGCGCAAAACGATGA
Upstream 100 bases:
>100_bases AATTGGGAGGTTAGAGGTGGTCCCGCGAATCAGGACATCCGGTTAAGTGAAATCTCTGCTTCAATGGGCGATGGAAATCG CCTGCCAAGGAGCAGAAGCA
Downstream 100 bases:
>100_bases TCGACAAGGCCCACGATCTGCCTGTCGTCAGGCAAGTCCAGTTGCTTGAACTTTCCCGCTCTTCTGTCTATTACCAGCCG CAGCCCATCCCCGAAGACGA
Product: transposase IS3/IS911
Products: NA
Alternate protein names: Transposase InsN For Insertion Sequence Element IS; Transposase IS3/IS; IS3 Family Transposase OrfA; Transposase IS3 Family Protein; Transposase IS3 Family
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MRRPRRNHTAAFKAKVAIAALKGDETLATLAEKFDVHPNQITQWKTQLLENASGVFATAAEKQAATPDLKDLHAKIGQQA LEIDFLAGALGRIGDASAKR
Sequences:
>Translated_100_residues MRRPRRNHTAAFKAKVAIAALKGDETLATLAEKFDVHPNQITQWKTQLLENASGVFATAAEKQAATPDLKDLHAKIGQQA LEIDFLAGALGRIGDASAKR >Mature_100_residues MRRPRRNHTAAFKAKVAIAALKGDETLATLAEKFDVHPNQITQWKTQLLENASGVFATAAEKQAATPDLKDLHAKIGQQA LEIDFLAGALGRIGDASAKR
Specific function: Unknown
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10805; Mature: 10805
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPRRNHTAAFKAKVAIAALKGDETLATLAEKFDVHPNQITQWKTQLLENASGVFATAA CCCCCCCCCHHHHHHHHEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECC EKQAATPDLKDLHAKIGQQALEIDFLAGALGRIGDASAKR CHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRRPRRNHTAAFKAKVAIAALKGDETLATLAEKFDVHPNQITQWKTQLLENASGVFATAA CCCCCCCCCHHHHHHHHEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECC EKQAATPDLKDLHAKIGQQALEIDFLAGALGRIGDASAKR CHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA