| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
Click here to switch to the map view.
The map label for this gene is 71906272
Identifier: 71906272
GI number: 71906272
Start: 695460
End: 695888
Strand: Reverse
Name: 71906272
Synonym: Daro_0632
Alternate gene names: NA
Gene position: 695888-695460 (Counterclockwise)
Preceding gene: 71906273
Following gene: 71906271
Centisome position: 15.46
GC content: 57.81
Gene sequence:
>429_bases ATGAACGAAATCATGCTCAAGAATGCCGGCGCTTCGGGCGTCTATTACCTGAGTCCCCCCCGCCAGTCCGCAATCAAAGC AGCTGCCTCCCGCGCGCGCTTTTGCGTCCTTGCCGCCAGCATTTCCAAGGCATCGTCTACCGAAGACGTCCTGGCCGAAC TTGGGTCTGCATTCAAGTTCCCAACTTGGTACGGCACAAATTTTGATGCCCTTTGCGATTGCCTGACCGACCCGGACTGG CAACCCGCAAAAGGACATGTACTCCTGATTAACGGATTAGCCAATCTGCGCGCCGCCCACCCTGATGATTTTGCGACGCT GATCGCAGTTCTACAGGCGGCGGCGGAAATTCGTCGCGACTCGCACAGCCCCTTCTGGATACTCATTGACACCCCGGCGC GCGACATTCCTGTGCTTGCCGAGGCATGA
Upstream 100 bases:
>100_bases CGCGGTCCACGTCGCATCATCTCCGGACAAGGTGGCGAGTATTACTATACCGACGATCACTACCGCAGTTTCCGGCGGAT CAAGGACTAGGCGCCTCGCG
Downstream 100 bases:
>100_bases CCGGGACCAAGCAGCCGGTCTCGGTTCTGGTTGTAATCCACACGCCGGCACTCGACATACTCGTCCTCGAAAGAGCTGCC CATCCCGGGTTCTGGCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MNEIMLKNAGASGVYYLSPPRQSAIKAAASRARFCVLAASISKASSTEDVLAELGSAFKFPTWYGTNFDALCDCLTDPDW QPAKGHVLLINGLANLRAAHPDDFATLIAVLQAAAEIRRDSHSPFWILIDTPARDIPVLAEA
Sequences:
>Translated_142_residues MNEIMLKNAGASGVYYLSPPRQSAIKAAASRARFCVLAASISKASSTEDVLAELGSAFKFPTWYGTNFDALCDCLTDPDW QPAKGHVLLINGLANLRAAHPDDFATLIAVLQAAAEIRRDSHSPFWILIDTPARDIPVLAEA >Mature_142_residues MNEIMLKNAGASGVYYLSPPRQSAIKAAASRARFCVLAASISKASSTEDVLAELGSAFKFPTWYGTNFDALCDCLTDPDW QPAKGHVLLINGLANLRAAHPDDFATLIAVLQAAAEIRRDSHSPFWILIDTPARDIPVLAEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15287; Mature: 15287
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEIMLKNAGASGVYYLSPPRQSAIKAAASRARFCVLAASISKASSTEDVLAELGSAFKF CCCEEEECCCCCCEEEECCCHHHHHHHHHHHHHEEEEEEHHHCCCCHHHHHHHHHHHCCC PTWYGTNFDALCDCLTDPDWQPAKGHVLLINGLANLRAAHPDDFATLIAVLQAAAEIRRD CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHC SHSPFWILIDTPARDIPVLAEA CCCCEEEEEECCCCCCCEEECC >Mature Secondary Structure MNEIMLKNAGASGVYYLSPPRQSAIKAAASRARFCVLAASISKASSTEDVLAELGSAFKF CCCEEEECCCCCCEEEECCCHHHHHHHHHHHHHEEEEEEHHHCCCCHHHHHHHHHHHCCC PTWYGTNFDALCDCLTDPDWQPAKGHVLLINGLANLRAAHPDDFATLIAVLQAAAEIRRD CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHC SHSPFWILIDTPARDIPVLAEA CCCCEEEEEECCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA