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The map label for this gene is rnaSA3 [H]

Identifier: 71906273

GI number: 71906273

Start: 695899

End: 696258

Strand: Reverse

Name: rnaSA3 [H]

Synonym: Daro_0633

Alternate gene names: 71906273

Gene position: 696258-695899 (Counterclockwise)

Preceding gene: 71906274

Following gene: 71906272

Centisome position: 15.47

GC content: 56.11

Gene sequence:

>360_bases
ATGCTGATCTTTCTGCGCTTCCTGGTCGTTGCCTGGTTGGCGATCGGAAGCGCATTTGCTTTTAGCTTTGACCGTAGCGC
CTCTGCCGATAGCGTGGCAAGCTCGGACTTGCCAAGTGAGGCCCGACAAACGCTGGTTTTGATCAAGGAAGGCGGACCAT
TCCCCTACGAGCGCGACGGCATTACATTCGGTAATTTCGAAAAACGTCTGCCGCTCCACCCTCGGGGATACTACCGGGAA
TACACCGTCAAAACGCCATGGCGTCAGGACCGCGGTCCACGTCGCATCATCTCCGGACAAGGTGGCGAGTATTACTATAC
CGACGATCACTACCGCAGTTTCCGGCGGATCAAGGACTAG

Upstream 100 bases:

>100_bases
CGCACCGAGCGGTGTCGACGAGAAGCAACTGCGGGAACTGCACATCCGCCTGCGCCAGAAGGTTGAAACTCAAGTTGAAG
TCGGCCAGCCCTAAGCAAGC

Downstream 100 bases:

>100_bases
GCGCCTCGCGATGAACGAAATCATGCTCAAGAATGCCGGCGCTTCGGGCGTCTATTACCTGAGTCCCCCCCGCCAGTCCG
CAATCAAAGCAGCTGCCTCC

Product: guanine-specific ribonuclease N1 and T1

Products: NA

Alternate protein names: RNase Sa3 [H]

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MLIFLRFLVVAWLAIGSAFAFSFDRSASADSVASSDLPSEARQTLVLIKEGGPFPYERDGITFGNFEKRLPLHPRGYYRE
YTVKTPWRQDRGPRRIISGQGGEYYYTDDHYRSFRRIKD

Sequences:

>Translated_119_residues
MLIFLRFLVVAWLAIGSAFAFSFDRSASADSVASSDLPSEARQTLVLIKEGGPFPYERDGITFGNFEKRLPLHPRGYYRE
YTVKTPWRQDRGPRRIISGQGGEYYYTDDHYRSFRRIKD
>Mature_119_residues
MLIFLRFLVVAWLAIGSAFAFSFDRSASADSVASSDLPSEARQTLVLIKEGGPFPYERDGITFGNFEKRLPLHPRGYYRE
YTVKTPWRQDRGPRRIISGQGGEYYYTDDHYRSFRRIKD

Specific function: Unknown

COG id: COG4290

COG function: function code F; Guanyl-specific ribonuclease Sa

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribonuclease N1/T1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000026
- InterPro:   IPR016191 [H]

Pfam domain/function: PF00545 Ribonuclease [H]

EC number: =3.1.27.3 [H]

Molecular weight: Translated: 13821; Mature: 13821

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIFLRFLVVAWLAIGSAFAFSFDRSASADSVASSDLPSEARQTLVLIKEGGPFPYERDG
CCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
ITFGNFEKRLPLHPRGYYREYTVKTPWRQDRGPRRIISGQGGEYYYTDDHYRSFRRIKD
CEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCEEEECHHHHHHHHCCC
>Mature Secondary Structure
MLIFLRFLVVAWLAIGSAFAFSFDRSASADSVASSDLPSEARQTLVLIKEGGPFPYERDG
CCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
ITFGNFEKRLPLHPRGYYREYTVKTPWRQDRGPRRIISGQGGEYYYTDDHYRSFRRIKD
CEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCEEEECHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1398084 [H]