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The map label for this gene is ssb1

Identifier: 71909916

GI number: 71909916

Start: 112295

End: 112690

Strand: Direct

Name: ssb1

Synonym: M5005_Spy_0102

Alternate gene names: 71909916

Gene position: 112295-112690 (Clockwise)

Preceding gene: 71909915

Following gene: 71909921

Centisome position: 6.11

GC content: 38.38

Gene sequence:

>396_bases
ATGTATAATAAAGTGATAGCAATCGGTCGTTTGGTAGCTAAACCAGAATTGGTAAAAACAGCTACGGATAAGCATGTAGC
ACGTCTCTCTTTAGCTGTTAATCGAAGATTTAAAAATGCTTCTGGAGAGCGAGAAGCTGATTTTATTTCAGTTGTTGTTT
GGGGAAAGTTAGCAGAAACTCTGGTTTCTTATGCTAGCAAAGGTAGTTTGATGTCTATTGATGGCGAACTTAGGACCCGC
AAGTATGATAAAGATGGGCAAGTGCATTATGTGACAGAAGTTCTCTGCCAATCATTTCAACTGCTTGAAAGTCGTGCTCA
GCGCGCTATGAGAGAAAATAATGTTACTAATGATCTAGTTGATTTAGTCTTAGAAGAAGATACTCTTCCCTTTTGA

Upstream 100 bases:

>100_bases
ATTAGGAGCCCTTAATCCTTTTTTCTTATGTTTTCAAAAACGTTTAAAATGAAACTTATTTTACCACAATTTTTACGAAT
AATAAGATAAGGAGGTCAGT

Downstream 100 bases:

>100_bases
TAGAGGATAATGCTTCTCATCAGGGTTCAGCTGATTACTGAAATATATGATGAGGTGATATCCGAACAACAAAAGTGTGA
CTAGATACTTCTGATAAAAA

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB 1; Helix-destabilizing protein 1

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MYNKVIAIGRLVAKPELVKTATDKHVARLSLAVNRRFKNASGEREADFISVVVWGKLAETLVSYASKGSLMSIDGELRTR
KYDKDGQVHYVTEVLCQSFQLLESRAQRAMRENNVTNDLVDLVLEEDTLPF

Sequences:

>Translated_131_residues
MYNKVIAIGRLVAKPELVKTATDKHVARLSLAVNRRFKNASGEREADFISVVVWGKLAETLVSYASKGSLMSIDGELRTR
KYDKDGQVHYVTEVLCQSFQLLESRAQRAMRENNVTNDLVDLVLEEDTLPF
>Mature_131_residues
MYNKVIAIGRLVAKPELVKTATDKHVARLSLAVNRRFKNASGEREADFISVVVWGKLAETLVSYASKGSLMSIDGELRTR
KYDKDGQVHYVTEVLCQSFQLLESRAQRAMRENNVTNDLVDLVLEEDTLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

Organism=Escherichia coli, GI1790494, Length=110, Percent_Identity=39.0909090909091, Blast_Score=67, Evalue=3e-13,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SSB1_STRP6 (Q5XE77)

Other databases:

- EMBL:   CP000003
- RefSeq:   YP_059469.1
- ProteinModelPortal:   Q5XE77
- SMR:   Q5XE77
- EnsemblBacteria:   EBSTRT00000038234
- GeneID:   2941013
- GenomeReviews:   CP000003_GR
- KEGG:   spa:M6_Spy0151
- GeneTree:   EBGT00050000026938
- HOGENOM:   HBG755544
- OMA:   QLEIRRQ
- ProtClustDB:   PRK07274
- BioCyc:   SPYO286636:M6_SPY0151-MONOMER
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR10302
- TIGRFAMs:   TIGR00621

Pfam domain/function: PF00436 SSB; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 14788; Mature: 14788

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNKVIAIGRLVAKPELVKTATDKHVARLSLAVNRRFKNASGEREADFISVVVWGKLAET
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LVSYASKGSLMSIDGELRTRKYDKDGQVHYVTEVLCQSFQLLESRAQRAMRENNVTNDLV
HHHHHCCCCEEEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
DLVLEEDTLPF
HHHHCCCCCCC
>Mature Secondary Structure
MYNKVIAIGRLVAKPELVKTATDKHVARLSLAVNRRFKNASGEREADFISVVVWGKLAET
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LVSYASKGSLMSIDGELRTRKYDKDGQVHYVTEVLCQSFQLLESRAQRAMRENNVTNDLV
HHHHHCCCCEEEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
DLVLEEDTLPF
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA