| Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
|---|---|
| Accession | NC_007295 |
| Length | 897,405 |
Click here to switch to the map view.
The map label for this gene is 71893444
Identifier: 71893444
GI number: 71893444
Start: 107443
End: 109581
Strand: Reverse
Name: 71893444
Synonym: MHJ_0085
Alternate gene names: NA
Gene position: 109581-107443 (Counterclockwise)
Preceding gene: 71893447
Following gene: 71893443
Centisome position: 12.21
GC content: 28.24
Gene sequence:
>2139_bases ATTAAAAAGACAAAATATGTTATAATTTTTATAAATAATTTTAATTGGGTGCGAAAAATGAAATTAGCAAAATTTAAAAA AATAATTTTATTATTGGTGTTTTGACCATCAATTTTTTTAATATATCACTCTTTTCTTATAAATTTTAATACTAAAAAAT ATTGATATGCTTCAAATTTTAGTAATAAAATCGATATAAGAGAACCTTTTGCCAAAAAGTTCAGTAACTCGGCAAAAATT GATGATTTTGATAATCAATTCGAATTAAAACTATTGTTAAACCCTAATTTCTTGAGTACTGAGTCTAAAGAAATAAGTAA CTTTAATCTTGAATTTATTAAAAAAATAGAAAAATCAAGATTAAAATTCAAAGAAGTTAAGAGCAGTAAAATATTACCAA TTGTATGGTTTTATTTTGATACCGAGAATGATAGAGAGTTTTTTGTAAAGAATTCAATAGAAAACTCGTTCATTAGTCGT TACATCGTATATAAAAATGAAGGAGATAAAAAAATAAAGCCTTTAAGTTGGTATCGTTATAATGATCAATTTCTAGATAA TTACTACCATTATTTACCTAAAACTCCAATTGACAAATTCAAAGAATCATTGTTAAAAAATATTAAGATTGTTAATTTTG AAGAACAGACTAAAAAGGATGAATTAACTTACAAATCACCACAAACAAAAGTTGGCGCAATTGAAGTTACTGATGAATTT AACTATAATTTTATGAGTTATTTTAATGCTAATAATTTTCATATTAACGACTTGGGATCTACTAATAAGTGAAATGAACA AAAGGAAGGTCAAAAAGAACCATATCATTCAACTTTAGTATCATTAATATTAGGCGGTAAACTGGGCATTGATACCAAGT CAACTCCCTATTTGTCTATATTTGGTATTAACAGTCAATGACAAAAAGCAATTGAATGGATGGTTAAAACCAATAATGTT AAAGTAATAAATCATAGTTATGGGGGTGGAAAAAAAGAGTTTTACGATTATGATGAAGACTCCTTTTTTCTTGATTTTTT AGCAAGAAAATATGGTGTTATTAACGTTTTTGCAGCGGGTAACGGTGCAAGAGAATATTCTGATGAGGAATATGAGGACC ACCCTTGAATAGATGCGTGAAGTTTGTCTTTAAATTCTATAGTTGTTGGGGCACTTGATGATAATTCTGAACCTTGAAAA ATTGCCAAAAACAAAATTGCTGACTATTCAAATTATAAAACTGGCCAACAATATTATGAACTGGCCAAACCTTTAGTCGT CGCTCCCGGGCGGATTTATAATCCTGTTACTAATCGTTCTAAGGATGATTTTGTTAGCGGAACTAGTTTTGCAGCCCCTG TTGTCACTGGCTTAATATCAACACTGCTAAGAGAAAAACCAAATTTAGATAATGATGATAATAGACTAATAGCATTAAAA GCAATTTTATCTGCTTCGGCAATTTCCCCAGATCATAGTGATTTAACTAAAAAGAAAAGCGGTTATTTTGAAAAATATGG CTCAGGCACTCCTGATTTTAAAAATATGTTAAAAGCTAGTGAAAATACCTACTTTATTAAAGACCAAAAAAAATCAGAAA ATGAAATAATTTTTACTAGCAAACCATTCTGAGTAAATTCAAACGATAGAATTAAAGCTTCTTTATCTTGAATGTTTAAT GCTGGTCTTCTAAAAAATAAAGTTGCTGCGCCTGACAAGAGCAACTACATAAGTTGATGGTGATTTTTAACACCCTTTGC TCCGATTGTTTTCCCAATTGCAGGCGCTGCAGCTATTTTAGATGCTAAAGCTAAGATAGACAAATATAAAAATGACTTTG ACAAATGGTCAAAAACACATATTAATTCTGAACGTTTAAACTTAGAAGCTACTAAAAAAAATCAAAATGACACTTGGGTT TCAGATTATGATTTGTATTTGCAAAAACTTGATTCAAACAATAATTGAATTGATGTTTCTTGGTCAACAAGTATTAAAAG CAATGATGAATTAATTGATTTTAGAGCAAAAGAATCAGGCTACTATCGGCTTTATATCAAAAAATTTAAATCTGTAACTT TTGATAATTCTGTTGAAGATAAATTAGCACTTTCTTATTTGGTTAATAATGAAAAATAA
Upstream 100 bases:
>100_bases AACCATTTAGTTTCAGCAATTTTGATATATTTAAATTTGTATTGTTTCATTTTGAGACACCTTTTTTTTAATGTGTCTGA AATTAATATACTAACTTAAA
Downstream 100 bases:
>100_bases ACTAATTCTTAGTAAATTTTTGGGAATAACCCTTTTAATTCCGGCATTTTTTTTAACTTCCTGCAGAAATTTAATTCCTT TTATTGTTAAGCAAATTTTT
Product: putative subtilisin-like serine protease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 712; Mature: 712
Protein sequence:
>712_residues MKKTKYVIIFINNFNWVRKMKLAKFKKIILLLVFWPSIFLIYHSFLINFNTKKYWYASNFSNKIDIREPFAKKFSNSAKI DDFDNQFELKLLLNPNFLSTESKEISNFNLEFIKKIEKSRLKFKEVKSSKILPIVWFYFDTENDREFFVKNSIENSFISR YIVYKNEGDKKIKPLSWYRYNDQFLDNYYHYLPKTPIDKFKESLLKNIKIVNFEEQTKKDELTYKSPQTKVGAIEVTDEF NYNFMSYFNANNFHINDLGSTNKWNEQKEGQKEPYHSTLVSLILGGKLGIDTKSTPYLSIFGINSQWQKAIEWMVKTNNV KVINHSYGGGKKEFYDYDEDSFFLDFLARKYGVINVFAAGNGAREYSDEEYEDHPWIDAWSLSLNSIVVGALDDNSEPWK IAKNKIADYSNYKTGQQYYELAKPLVVAPGRIYNPVTNRSKDDFVSGTSFAAPVVTGLISTLLREKPNLDNDDNRLIALK AILSASAISPDHSDLTKKKSGYFEKYGSGTPDFKNMLKASENTYFIKDQKKSENEIIFTSKPFWVNSNDRIKASLSWMFN AGLLKNKVAAPDKSNYISWWWFLTPFAPIVFPIAGAAAILDAKAKIDKYKNDFDKWSKTHINSERLNLEATKKNQNDTWV SDYDLYLQKLDSNNNWIDVSWSTSIKSNDELIDFRAKESGYYRLYIKKFKSVTFDNSVEDKLALSYLVNNEK
Sequences:
>Translated_712_residues MKKTKYVIIFINNFNWVRKMKLAKFKKIILLLVF*PSIFLIYHSFLINFNTKKY*YASNFSNKIDIREPFAKKFSNSAKI DDFDNQFELKLLLNPNFLSTESKEISNFNLEFIKKIEKSRLKFKEVKSSKILPIVWFYFDTENDREFFVKNSIENSFISR YIVYKNEGDKKIKPLSWYRYNDQFLDNYYHYLPKTPIDKFKESLLKNIKIVNFEEQTKKDELTYKSPQTKVGAIEVTDEF NYNFMSYFNANNFHINDLGSTNK*NEQKEGQKEPYHSTLVSLILGGKLGIDTKSTPYLSIFGINSQ*QKAIEWMVKTNNV KVINHSYGGGKKEFYDYDEDSFFLDFLARKYGVINVFAAGNGAREYSDEEYEDHP*IDA*SLSLNSIVVGALDDNSEP*K IAKNKIADYSNYKTGQQYYELAKPLVVAPGRIYNPVTNRSKDDFVSGTSFAAPVVTGLISTLLREKPNLDNDDNRLIALK AILSASAISPDHSDLTKKKSGYFEKYGSGTPDFKNMLKASENTYFIKDQKKSENEIIFTSKPF*VNSNDRIKASLS*MFN AGLLKNKVAAPDKSNYIS*W*FLTPFAPIVFPIAGAAAILDAKAKIDKYKNDFDKWSKTHINSERLNLEATKKNQNDTWV SDYDLYLQKLDSNNN*IDVSWSTSIKSNDELIDFRAKESGYYRLYIKKFKSVTFDNSVEDKLALSYLVNNEK >Mature_712_residues MKKTKYVIIFINNFNWVRKMKLAKFKKIILLLVF*PSIFLIYHSFLINFNTKKY*YASNFSNKIDIREPFAKKFSNSAKI DDFDNQFELKLLLNPNFLSTESKEISNFNLEFIKKIEKSRLKFKEVKSSKILPIVWFYFDTENDREFFVKNSIENSFISR YIVYKNEGDKKIKPLSWYRYNDQFLDNYYHYLPKTPIDKFKESLLKNIKIVNFEEQTKKDELTYKSPQTKVGAIEVTDEF NYNFMSYFNANNFHINDLGSTNK*NEQKEGQKEPYHSTLVSLILGGKLGIDTKSTPYLSIFGINSQ*QKAIEWMVKTNNV KVINHSYGGGKKEFYDYDEDSFFLDFLARKYGVINVFAAGNGAREYSDEEYEDHP*IDA*SLSLNSIVVGALDDNSEP*K IAKNKIADYSNYKTGQQYYELAKPLVVAPGRIYNPVTNRSKDDFVSGTSFAAPVVTGLISTLLREKPNLDNDDNRLIALK AILSASAISPDHSDLTKKKSGYFEKYGSGTPDFKNMLKASENTYFIKDQKKSENEIIFTSKPF*VNSNDRIKASLS*MFN AGLLKNKVAAPDKSNYIS*W*FLTPFAPIVFPIAGAAAILDAKAKIDKYKNDFDKWSKTHINSERLNLEATKKNQNDTWV SDYDLYLQKLDSNNN*IDVSWSTSIKSNDELIDFRAKESGYYRLYIKKFKSVTFDNSVEDKLALSYLVNNEK
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80653; Mature: 80653
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTKYVIIFINNFNWVRKMKLAKFKKIILLLVFPSIFLIYHSFLINFNTKKYYASNFSN CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCCCC KIDIREPFAKKFSNSAKIDDFDNQFELKLLLNPNFLSTESKEISNFNLEFIKKIEKSRLK CCCCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHH FKEVKSSKILPIVWFYFDTENDREFFVKNSIENSFISRYIVYKNEGDKKIKPLSWYRYND HHHHCCCCCCEEEEEEEECCCCCEEEEECCHHHHHHEEEEEEECCCCCCCCCEEEEECCH QFLDNYYHYLPKTPIDKFKESLLKNIKIVNFEEQTKKDELTYKSPQTKVGAIEVTDEFNY HHHHHHHHHCCCCHHHHHHHHHHHCCEEEECHHHCCCCCCCCCCCCCEEEEEEEECCCCC NFMSYFNANNFHINDLGSTNKNEQKEGQKEPYHSTLVSLILGGKLGIDTKSTPYLSIFGI CEEEEECCCCEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC NSQQKAIEWMVKTNNVKVINHSYGGGKKEFYDYDEDSFFLDFLARKYGVINVFAAGNGAR CCHHHHEEEEEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCC EYSDEEYEDHPIDASLSLNSIVVGALDDNSEPKIAKNKIADYSNYKTGQQYYELAKPLVV CCCCCCCCCCCCCCEEEECEEEEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHCCCEEE APGRIYNPVTNRSKDDFVSGTSFAAPVVTGLISTLLREKPNLDNDDNRLIALKAILSASA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHC ISPDHSDLTKKKSGYFEKYGSGTPDFKNMLKASENTYFIKDQKKSENEIIFTSKPFVNSN CCCCHHHHHHHHCCCHHHCCCCCCHHHHHHHCCCCEEEEECCCCCCCCEEEECCCCCCCC DRIKASLSMFNAGLLKNKVAAPDKSNYISWFLTPFAPIVFPIAGAAAILDAKAKIDKYKN CCEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHH DFDKWSKTHINSERLNLEATKKNQNDTWVSDYDLYLQKLDSNNNIDVSWSTSIKSNDELI HHHHHHHHCCCCHHEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCEE DFRAKESGYYRLYIKKFKSVTFDNSVEDKLALSYLVNNEK EEEECCCCEEEEEEEHHHCCCCCCCCHHHHHHHHEECCCC >Mature Secondary Structure MKKTKYVIIFINNFNWVRKMKLAKFKKIILLLVFPSIFLIYHSFLINFNTKKYYASNFSN CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCCCC KIDIREPFAKKFSNSAKIDDFDNQFELKLLLNPNFLSTESKEISNFNLEFIKKIEKSRLK CCCCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHH FKEVKSSKILPIVWFYFDTENDREFFVKNSIENSFISRYIVYKNEGDKKIKPLSWYRYND HHHHCCCCCCEEEEEEEECCCCCEEEEECCHHHHHHEEEEEEECCCCCCCCCEEEEECCH QFLDNYYHYLPKTPIDKFKESLLKNIKIVNFEEQTKKDELTYKSPQTKVGAIEVTDEFNY HHHHHHHHHCCCCHHHHHHHHHHHCCEEEECHHHCCCCCCCCCCCCCEEEEEEEECCCCC NFMSYFNANNFHINDLGSTNKNEQKEGQKEPYHSTLVSLILGGKLGIDTKSTPYLSIFGI CEEEEECCCCEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC NSQQKAIEWMVKTNNVKVINHSYGGGKKEFYDYDEDSFFLDFLARKYGVINVFAAGNGAR CCHHHHEEEEEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCC EYSDEEYEDHPIDASLSLNSIVVGALDDNSEPKIAKNKIADYSNYKTGQQYYELAKPLVV CCCCCCCCCCCCCCEEEECEEEEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHCCCEEE APGRIYNPVTNRSKDDFVSGTSFAAPVVTGLISTLLREKPNLDNDDNRLIALKAILSASA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHC ISPDHSDLTKKKSGYFEKYGSGTPDFKNMLKASENTYFIKDQKKSENEIIFTSKPFVNSN CCCCHHHHHHHHCCCHHHCCCCCCHHHHHHHCCCCEEEEECCCCCCCCEEEECCCCCCCC DRIKASLSMFNAGLLKNKVAAPDKSNYISWFLTPFAPIVFPIAGAAAILDAKAKIDKYKN CCEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHH DFDKWSKTHINSERLNLEATKKNQNDTWVSDYDLYLQKLDSNNNIDVSWSTSIKSNDELI HHHHHHHHCCCCHHEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCEE DFRAKESGYYRLYIKKFKSVTFDNSVEDKLALSYLVNNEK EEEECCCCEEEEEEEHHHCCCCCCCCHHHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA