| Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
|---|---|
| Accession | NC_007295 |
| Length | 897,405 |
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The map label for this gene is 71893443
Identifier: 71893443
GI number: 71893443
Start: 105969
End: 107405
Strand: Reverse
Name: 71893443
Synonym: MHJ_0084
Alternate gene names: NA
Gene position: 107405-105969 (Counterclockwise)
Preceding gene: 71893444
Following gene: 161611224
Centisome position: 11.97
GC content: 25.26
Gene sequence:
>1437_bases ATTCCGGCATTTTTTTTAACTTCCTGCAGAAATTTAATTCCTTTTATTGTTAAGCAAATTTTTAACAAAGATGAGGGAAT TAACAATCCAGAAAATTATAATTCTTATTATTTTTTAAATTTACTAGCGAAGCATTATGAAGAATTTAATGCAAAAAATG GTACTTTTTCAGCCTTAAATCTGTTTTATAATCAACCCGAAAAACAACGGGACAAATTTTTATTCCTTGGTGAACAAAGT AGAATAACAATTGAAAATTTAGAGCAATTTCAAAAAAATATTGTTGATAGAACTGAAGAAATTATAAAAAATAATCCTAA TTTTGCTAAAGTTAATAGTTCTGAACTCAAGTCAGAATTTGAAGACAAGTTTCTAAAAGGAGAACTTCTTGAAAAAGTCT TAGAAAAAAACAATATTATAATAGGCGAGCGTGGTAGATATTGAAAACCAACTCGTGTTACCCACTATTATTTTGAAGAA AATGGTTTTTCAAACATTATAGCCACAAGATTTACACCAGATTATATTATAGATGCAAAATTAATTGAACCCGCTGTAGT TTTTGATGATTCACCTTTTTTTAATGTTATAGTCTACCCTAAAAATAAAACAATCACCTTTAGGAACATTGAAGAAAAAA TTTACACTGGCCATAATGATAAAAATATAGACTATAAAAGAAAGAAAATATTAATTGAAGGAGAAGCTAGAAAAATTTAT AATAAACTCGCAAAAAAGTACAATTTATCAAAAAACAAGATTAGTACTTCTTACCCCTCTTTTATGTTTAATATTATCAA TTTTAGCCAAGAAATTAATAATATTAAAACTTTAAAGCCAAAAATTCTTGATTTAATTACAAATAAAATTAATCCTTGAT CTAACAGTTTTTTACCAAAAAAACATACAATTATTAAAAATATTGACGAATTTAAGACAACAATTATTGACCGAATTTTA AAATTAGATCCTAAATTAAAACTTGACCAAAATGATTTAATTTCTGATTTTGAAGAAAAATTTCTAAACAGCGAAAAACT TGATGAATTTCTAAAAAATAATAATATTTTTATTTACGAAACTTGGGAACGAATTGGTTATGAACCATTTTGAGGAGGGG TTCTCCAGCCTATATCCCCCCCTACTAATTTTTCAAAAAGGGTTGAATGAGAAAAATTGGTTCTTAGAAAAACAGAAAAT AATAATAATAATAATAATATTTTTTTGACAACAATTTTTAAAACGGATTTAACACTAAATTTTAATACAAATCCTGAATC CAGTTTTGATAAAGTGGCCTTCCAAATCCTGGCTTTTCCTAAGGATAAAAATATCGTTTTTGATAAAAAAGTTAGCCGAC TTGAACTAATTGAAGATTTAAAAAACAATTATTTAGATAAATATGAAGAAGATCCAAAAGAAAAAAACTACATATAA
Upstream 100 bases:
>100_bases ACTTTTGATAATTCTGTTGAAGATAAATTAGCACTTTCTTATTTGGTTAATAATGAAAAATAAACTAATTCTTAGTAAAT TTTTGGGAATAACCCTTTTA
Downstream 100 bases:
>100_bases ATTTAAATTAGTAAAAAAATCAGGCAAATAATTTTTATTTGCAGTTTGTGGTAAAAACTCATTTGCATTTTAAGCAACCT TTTTATAGACTTTTCTAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MPAFFLTSCRNLIPFIVKQIFNKDEGINNPENYNSYYFLNLLAKHYEEFNAKNGTFSALNLFYNQPEKQRDKFLFLGEQS RITIENLEQFQKNIVDRTEEIIKNNPNFAKVNSSELKSEFEDKFLKGELLEKVLEKNNIIIGERGRYWKPTRVTHYYFEE NGFSNIIATRFTPDYIIDAKLIEPAVVFDDSPFFNVIVYPKNKTITFRNIEEKIYTGHNDKNIDYKRKKILIEGEARKIY NKLAKKYNLSKNKISTSYPSFMFNIINFSQEINNIKTLKPKILDLITNKINPWSNSFLPKKHTIIKNIDEFKTTIIDRIL KLDPKLKLDQNDLISDFEEKFLNSEKLDEFLKNNNIFIYETWERIGYEPFWGGVLQPISPPTNFSKRVEWEKLVLRKTEN NNNNNNIFLTTIFKTDLTLNFNTNPESSFDKVAFQILAFPKDKNIVFDKKVSRLELIEDLKNNYLDKYEEDPKEKNYI
Sequences:
>Translated_478_residues MPAFFLTSCRNLIPFIVKQIFNKDEGINNPENYNSYYFLNLLAKHYEEFNAKNGTFSALNLFYNQPEKQRDKFLFLGEQS RITIENLEQFQKNIVDRTEEIIKNNPNFAKVNSSELKSEFEDKFLKGELLEKVLEKNNIIIGERGRY*KPTRVTHYYFEE NGFSNIIATRFTPDYIIDAKLIEPAVVFDDSPFFNVIVYPKNKTITFRNIEEKIYTGHNDKNIDYKRKKILIEGEARKIY NKLAKKYNLSKNKISTSYPSFMFNIINFSQEINNIKTLKPKILDLITNKINP*SNSFLPKKHTIIKNIDEFKTTIIDRIL KLDPKLKLDQNDLISDFEEKFLNSEKLDEFLKNNNIFIYETWERIGYEPF*GGVLQPISPPTNFSKRVE*EKLVLRKTEN NNNNNNIFLTTIFKTDLTLNFNTNPESSFDKVAFQILAFPKDKNIVFDKKVSRLELIEDLKNNYLDKYEEDPKEKNYI >Mature_477_residues PAFFLTSCRNLIPFIVKQIFNKDEGINNPENYNSYYFLNLLAKHYEEFNAKNGTFSALNLFYNQPEKQRDKFLFLGEQSR ITIENLEQFQKNIVDRTEEIIKNNPNFAKVNSSELKSEFEDKFLKGELLEKVLEKNNIIIGERGRY*KPTRVTHYYFEEN GFSNIIATRFTPDYIIDAKLIEPAVVFDDSPFFNVIVYPKNKTITFRNIEEKIYTGHNDKNIDYKRKKILIEGEARKIYN KLAKKYNLSKNKISTSYPSFMFNIINFSQEINNIKTLKPKILDLITNKINP*SNSFLPKKHTIIKNIDEFKTTIIDRILK LDPKLKLDQNDLISDFEEKFLNSEKLDEFLKNNNIFIYETWERIGYEPF*GGVLQPISPPTNFSKRVE*EKLVLRKTENN NNNNNIFLTTIFKTDLTLNFNTNPESSFDKVAFQILAFPKDKNIVFDKKVSRLELIEDLKNNYLDKYEEDPKEKNYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55914; Mature: 55783
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAFFLTSCRNLIPFIVKQIFNKDEGINNPENYNSYYFLNLLAKHYEEFNAKNGTFSALN CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH LFYNQPEKQRDKFLFLGEQSRITIENLEQFQKNIVDRTEEIIKNNPNFAKVNSSELKSEF HHHCCCHHHCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHH EDKFLKGELLEKVLEKNNIIIGERGRYKPTRVTHYYFEENGFSNIIATRFTPDYIIDAKL HHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCEEEHHH IEPAVVFDDSPFFNVIVYPKNKTITFRNIEEKIYTGHNDKNIDYKRKKILIEGEARKIYN CCCEEEECCCCCEEEEEECCCCEEEEEEHHHHHHCCCCCCCCCEEEEEEEEECHHHHHHH KLAKKYNLSKNKISTSYPSFMFNIINFSQEINNIKTLKPKILDLITNKINPSNSFLPKKH HHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH TIIKNIDEFKTTIIDRILKLDPKLKLDQNDLISDFEEKFLNSEKLDEFLKNNNIFIYETW HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECH ERIGYEPFGGVLQPISPPTNFSKRVEEKLVLRKTENNNNNNNIFLTTIFKTDLTLNFNTN HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCEEEEEEEEEEEEEEEECCC PESSFDKVAFQILAFPKDKNIVFDKKVSRLELIEDLKNNYLDKYEEDPKEKNYI CCCHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PAFFLTSCRNLIPFIVKQIFNKDEGINNPENYNSYYFLNLLAKHYEEFNAKNGTFSALN CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH LFYNQPEKQRDKFLFLGEQSRITIENLEQFQKNIVDRTEEIIKNNPNFAKVNSSELKSEF HHHCCCHHHCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHH EDKFLKGELLEKVLEKNNIIIGERGRYKPTRVTHYYFEENGFSNIIATRFTPDYIIDAKL HHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCEEEHHH IEPAVVFDDSPFFNVIVYPKNKTITFRNIEEKIYTGHNDKNIDYKRKKILIEGEARKIYN CCCEEEECCCCCEEEEEECCCCEEEEEEHHHHHHCCCCCCCCCEEEEEEEEECHHHHHHH KLAKKYNLSKNKISTSYPSFMFNIINFSQEINNIKTLKPKILDLITNKINPSNSFLPKKH HHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH TIIKNIDEFKTTIIDRILKLDPKLKLDQNDLISDFEEKFLNSEKLDEFLKNNNIFIYETW HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECH ERIGYEPFGGVLQPISPPTNFSKRVEEKLVLRKTENNNNNNNIFLTTIFKTDLTLNFNTN HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCEEEEEEEEEEEEEEEECCC PESSFDKVAFQILAFPKDKNIVFDKKVSRLELIEDLKNNYLDKYEEDPKEKNYI CCCHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA