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The map label for this gene is recA [H]

Identifier: 71893394

GI number: 71893394

Start: 45597

End: 46586

Strand: Reverse

Name: recA [H]

Synonym: MHJ_0035

Alternate gene names: 71893394

Gene position: 46586-45597 (Counterclockwise)

Preceding gene: 71893421

Following gene: 71893393

Centisome position: 5.19

GC content: 34.44

Gene sequence:

>990_bases
TTATTAAAACAAGCGCTTGCAGAAATTAAAAAGAAATTTGGTAACGAATCAATTATGGTTTTAGGTGAAAAGCCGCCAAT
TGATACAGAAGTTTTTTCATCTGGGAGTATGGCTATCGATATGGCTCTTGGAATTGGTGGTTTTCCGAAAGGAAGAATTG
TTGAGATTTATGGTCCTGAATCATCAGGGAAAACCACAATTAGTCTCCATGCCATTGCTGAAGTCCAAAAACAGGGAGGA
ATTGCCGCCTTTATTGATGCAGAACATTCAATTGATCCACAGTATGCAAAAAATTTAGGAATTGATATCGATAATTTAAT
ACTTTCACAGCCAGACTCTGGCGAACAAGCTTTAGACATTGTCGATACATTAACAAAAACAAAAGCAATTGATCTAATTG
TAGTTGACTCTGTTGCTGCATTAGTGCCAATGGCTGAACTTCAAGGAGAAATGAAAGATCAAGTAATAGGAGCACAAGCT
CGACTGATGTCAAAAGCGCTCCGAAAAATCACAGCATCTCTAAATAAAAACGGGACAACTGTAATTTTTATTAACCAAAT
TAGGGAAAAAGTTGGAGTAATTTTTGGTAATCCTGAAACTACTCCTGGTGGAAGAGGACTCAAATTTTATGCTTCAATCA
GGTTAGATGTTAGAAAAATTCAACAAATAACAAGTGGAAACGACATCACCGGGCATAGTGTAAAAATCAAAGTAGTAAAA
AATAAGCTTGCAATTCCTTTTAAAACTGCTTTAGTTGAAATTGTTTTTGCCAAAGGTATTTCAAAATCAGCAGAAATTGC
CCAATTAGGCGAGGAACTTGGAATTCTTGTACGAAAAGGTTCGTGATTTGCATATAAGGGAGAGAATATCGCCCAAGGTA
AAGTGAATTTAAAATTACTACTTGAAAATAATACCAAACTATTTAATGAAATAAAGGATCAAATTATTGAAAAACTAAAG
GAAAATCAACAACAATCTCAAACATTATAG

Upstream 100 bases:

>100_bases
TATTAAAATGTTTAAAAAATATTAAATTAGAATAAGCAACAAACCAAAACCGAAAAATTAAAAAAAGGAAACAATTATGA
CTGAAATTAACGAAAAATCA

Downstream 100 bases:

>100_bases
TAAAATTATTATTATAATGCATAAATTTATAAAATGATTTTTTTACTATTGTTTCTTAGTAATATTTTTAGTTGCTTTTA
GTGCCACAATTTATTTAATT

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MLKQALAEIKKKFGNESIMVLGEKPPIDTEVFSSGSMAIDMALGIGGFPKGRIVEIYGPESSGKTTISLHAIAEVQKQGG
IAAFIDAEHSIDPQYAKNLGIDIDNLILSQPDSGEQALDIVDTLTKTKAIDLIVVDSVAALVPMAELQGEMKDQVIGAQA
RLMSKALRKITASLNKNGTTVIFINQIREKVGVIFGNPETTPGGRGLKFYASIRLDVRKIQQITSGNDITGHSVKIKVVK
NKLAIPFKTALVEIVFAKGISKSAEIAQLGEELGILVRKGSWFAYKGENIAQGKVNLKLLLENNTKLFNEIKDQIIEKLK
ENQQQSQTL

Sequences:

>Translated_329_residues
LLKQALAEIKKKFGNESIMVLGEKPPIDTEVFSSGSMAIDMALGIGGFPKGRIVEIYGPESSGKTTISLHAIAEVQKQGG
IAAFIDAEHSIDPQYAKNLGIDIDNLILSQPDSGEQALDIVDTLTKTKAIDLIVVDSVAALVPMAELQGEMKDQVIGAQA
RLMSKALRKITASLNKNGTTVIFINQIREKVGVIFGNPETTPGGRGLKFYASIRLDVRKIQQITSGNDITGHSVKIKVVK
NKLAIPFKTALVEIVFAKGISKSAEIAQLGEELGILVRKGS*FAYKGENIAQGKVNLKLLLENNTKLFNEIKDQIIEKLK
ENQQQSQTL
>Mature_329_residues
LLKQALAEIKKKFGNESIMVLGEKPPIDTEVFSSGSMAIDMALGIGGFPKGRIVEIYGPESSGKTTISLHAIAEVQKQGG
IAAFIDAEHSIDPQYAKNLGIDIDNLILSQPDSGEQALDIVDTLTKTKAIDLIVVDSVAALVPMAELQGEMKDQVIGAQA
RLMSKALRKITASLNKNGTTVIFINQIREKVGVIFGNPETTPGGRGLKFYASIRLDVRKIQQITSGNDITGHSVKIKVVK
NKLAIPFKTALVEIVFAKGISKSAEIAQLGEELGILVRKGS*FAYKGENIAQGKVNLKLLLENNTKLFNEIKDQIIEKLK
ENQQQSQTL

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=321, Percent_Identity=52.6479750778816, Blast_Score=352, Evalue=2e-98,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 35457; Mature: 35457

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
LLKQALAEIKKKFGNESIMVLGEKPPIDTEVFSSGSMAIDMALGIGGFPKGRIVEIYGPE
CHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCCEEEEEEECCCCCCCCCEEEEECCC
SSGKTTISLHAIAEVQKQGGIAAFIDAEHSIDPQYAKNLGIDIDNLILSQPDSGEQALDI
CCCCEEEEEHHHHHHHHHCCEEEEEECCCCCCHHHHHHCCCCHHHHEECCCCCCHHHHHH
VDTLTKTKAIDLIVVDSVAALVPMAELQGEMKDQVIGAQARLMSKALRKITASLNKNGTT
HHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
VIFINQIREKVGVIFGNPETTPGGRGLKFYASIRLDVRKIQQITSGNDITGHSVKIKVVK
EEEEHHHHHHHCEEECCCCCCCCCCCEEEEEEEEHHHHHHHHHHCCCCCCCCEEEEEEEE
NKLAIPFKTALVEIVFAKGISKSAEIAQLGEELGILVRKGSFAYKGENIAQGKVNLKLLL
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCEEEECCCCEECCCCEECCEEEEEEEE
ENNTKLFNEIKDQIIEKLKENQQQSQTL
ECCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA