The gene/protein map for NC_007292 is currently unavailable.
Definition Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome.
Accession NC_007292
Length 791,654

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The map label for this gene is cysS

Identifier: 71892086

GI number: 71892086

Start: 369936

End: 371357

Strand: Direct

Name: cysS

Synonym: BPEN_312

Alternate gene names: 71892086

Gene position: 369936-371357 (Clockwise)

Preceding gene: 71892084

Following gene: 71892088

Centisome position: 46.73

GC content: 29.25

Gene sequence:

>1422_bases
ATGCTTAAAATTTTTAATACCTTAACAAAAAAAAAAGAAAAGTTTATACCTATTAATGCTGGTAAAATTAAAATATATGT
TTGTGGTGTTACAGTCTATGATTTATGCCATCTCGGACATGCCAGAACATTTATAGTATTTGATAGTGTTATTCGCTATT
TACGTCATTGCGGATATCAGGTGAGTTACGTCCGAAATATTACAGATATAGATGATAAAATTATAAAAAGAGCTTATGAA
AATAATGAAACTACCCAACAATTAACGAATCGTATGATTCAAGAAATGCATTTAGATTTAGATGCATTAAATATATTACG
CCCAAATTATGAACCAAAAGTAACTGAACATATTGATATAATCATTAAATTTATTTGTTTGTTAATTTCAAAAAAACACG
CATATACCGCCCCTAATGGAGATATAATGTTTTCTGTGGAAACTATGCACAATTATGGCGTTTTATCTAACAAAGAAAAT
CCACCTAAAATACATGATAATATCTTAAAAATACCAAATATAAAAAAAAACCCTATGGATTTTGTATTGTGGAAAAAAAC
AACATATAATAATAAACTAGGTGAGCCGTGTTGGTCATCTCCATGGGGATTAGGACGTCCAGGATGGCACATTGAATGTT
CAGCAATGAATTATTCCATTTTCGGGAATCAAATAGACATTCATGGTGGAGGATCAGATTTAATTTTTCCACATCATGAC
AACGAAATTGCTCAATCCGTATGTGCTCATGAGACTTCTTATGCAAATATATGGATGCATTCTGGTCTTCTGTTGTTAAA
CTATGAAAAAATGTCAAAATCATTAAATAATTTTTTTACCATACGCGATATTTTAAAACATTATGATCCTGAAACAATAA
GATTTTTTTTAATGTCTGCTCATTATCGTAGTCAATTAAAGTATAATGACAATAATCTTAAAAATGCGCAAACATCTTTA
AAACGGCTGTACATAGCTTTACGAGATACTAATCCTACAATCCAGCCTAATGGAGGTGATAATGAAGGAGAATATTTTAT
ATCAAAATTTATTTCTAAAATGAATGACGACTTCAATACACCAGAGGCATACTCAGTATTATTTGATATAGCACATAGAT
TAAATAATTTAAAAATTAAAGGTCATTCACTACTTGCTCAAGGTATGGCAGCTACCTTAAAATACTTAGCAAATATTATC
GGATTATTACATCAAAATCCAGAGATTTTTTTAAAAAAAATAACATTAAAACATAATAAAAATCGTCATTTTGAAAAAAT
TCAAAAATTAATTCAATGCCGCGAAGTTGCGCGAAAAAATAATCAATGGGAATTAGCTGATAGCATACGAAAAAAATTAA
CCGTTATGGGAATAACATTAGAAGATGGGCCTACAGGAATAACGAAATGGCATTTCAAATAA

Upstream 100 bases:

>100_bases
AGATTAAAGTATGATACTGATTAAAGATTCTAGTAAACCTATGAGGTTTATATACACTAAAGACCAATATATCGCCGCGT
ATATTGTAGAATAAATTAAA

Downstream 100 bases:

>100_bases
TATAAATAGTAATAAAAATAATTAAAAATGGAATAAACAAAAATTATCTTACTAAATGATGGTCATCATAAGCTTGCAAG
GTATTTTGAATAAGTGTTAC

Product: cysteinyl-tRNA synthetase

Products: NA

Alternate protein names: Cysteine--tRNA ligase; CysRS

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MLKIFNTLTKKKEKFIPINAGKIKIYVCGVTVYDLCHLGHARTFIVFDSVIRYLRHCGYQVSYVRNITDIDDKIIKRAYE
NNETTQQLTNRMIQEMHLDLDALNILRPNYEPKVTEHIDIIIKFICLLISKKHAYTAPNGDIMFSVETMHNYGVLSNKEN
PPKIHDNILKIPNIKKNPMDFVLWKKTTYNNKLGEPCWSSPWGLGRPGWHIECSAMNYSIFGNQIDIHGGGSDLIFPHHD
NEIAQSVCAHETSYANIWMHSGLLLLNYEKMSKSLNNFFTIRDILKHYDPETIRFFLMSAHYRSQLKYNDNNLKNAQTSL
KRLYIALRDTNPTIQPNGGDNEGEYFISKFISKMNDDFNTPEAYSVLFDIAHRLNNLKIKGHSLLAQGMAATLKYLANII
GLLHQNPEIFLKKITLKHNKNRHFEKIQKLIQCREVARKNNQWELADSIRKKLTVMGITLEDGPTGITKWHFK

Sequences:

>Translated_473_residues
MLKIFNTLTKKKEKFIPINAGKIKIYVCGVTVYDLCHLGHARTFIVFDSVIRYLRHCGYQVSYVRNITDIDDKIIKRAYE
NNETTQQLTNRMIQEMHLDLDALNILRPNYEPKVTEHIDIIIKFICLLISKKHAYTAPNGDIMFSVETMHNYGVLSNKEN
PPKIHDNILKIPNIKKNPMDFVLWKKTTYNNKLGEPCWSSPWGLGRPGWHIECSAMNYSIFGNQIDIHGGGSDLIFPHHD
NEIAQSVCAHETSYANIWMHSGLLLLNYEKMSKSLNNFFTIRDILKHYDPETIRFFLMSAHYRSQLKYNDNNLKNAQTSL
KRLYIALRDTNPTIQPNGGDNEGEYFISKFISKMNDDFNTPEAYSVLFDIAHRLNNLKIKGHSLLAQGMAATLKYLANII
GLLHQNPEIFLKKITLKHNKNRHFEKIQKLIQCREVARKNNQWELADSIRKKLTVMGITLEDGPTGITKWHFK
>Mature_473_residues
MLKIFNTLTKKKEKFIPINAGKIKIYVCGVTVYDLCHLGHARTFIVFDSVIRYLRHCGYQVSYVRNITDIDDKIIKRAYE
NNETTQQLTNRMIQEMHLDLDALNILRPNYEPKVTEHIDIIIKFICLLISKKHAYTAPNGDIMFSVETMHNYGVLSNKEN
PPKIHDNILKIPNIKKNPMDFVLWKKTTYNNKLGEPCWSSPWGLGRPGWHIECSAMNYSIFGNQIDIHGGGSDLIFPHHD
NEIAQSVCAHETSYANIWMHSGLLLLNYEKMSKSLNNFFTIRDILKHYDPETIRFFLMSAHYRSQLKYNDNNLKNAQTSL
KRLYIALRDTNPTIQPNGGDNEGEYFISKFISKMNDDFNTPEAYSVLFDIAHRLNNLKIKGHSLLAQGMAATLKYLANII
GLLHQNPEIFLKKITLKHNKNRHFEKIQKLIQCREVARKNNQWELADSIRKKLTVMGITLEDGPTGITKWHFK

Specific function: Unknown

COG id: COG0215

COG function: function code J; Cysteinyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family

Homologues:

Organism=Homo sapiens, GI13375695, Length=523, Percent_Identity=32.5047801147228, Blast_Score=248, Evalue=7e-66,
Organism=Homo sapiens, GI10835051, Length=239, Percent_Identity=37.6569037656904, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI62240992, Length=239, Percent_Identity=37.6569037656904, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI303304987, Length=239, Percent_Identity=37.6569037656904, Blast_Score=167, Evalue=3e-41,
Organism=Homo sapiens, GI21269877, Length=239, Percent_Identity=37.6569037656904, Blast_Score=167, Evalue=3e-41,
Organism=Escherichia coli, GI1786737, Length=473, Percent_Identity=57.5052854122622, Blast_Score=550, Evalue=1e-158,
Organism=Caenorhabditis elegans, GI17509795, Length=246, Percent_Identity=37.3983739837398, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17509797, Length=246, Percent_Identity=37.3983739837398, Blast_Score=159, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6324082, Length=360, Percent_Identity=32.5, Blast_Score=176, Evalue=5e-45,
Organism=Drosophila melanogaster, GI19922218, Length=383, Percent_Identity=37.597911227154, Blast_Score=238, Evalue=8e-63,
Organism=Drosophila melanogaster, GI19922364, Length=267, Percent_Identity=37.0786516853933, Blast_Score=163, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SYC_BLOPB (Q493A1)

Other databases:

- EMBL:   CP000016
- RefSeq:   YP_277816.1
- ProteinModelPortal:   Q493A1
- SMR:   Q493A1
- STRING:   Q493A1
- GeneID:   3562589
- GenomeReviews:   CP000016_GR
- KEGG:   bpn:BPEN_312
- eggNOG:   COG0215
- HOGENOM:   HBG327651
- OMA:   DFDALNM
- ProtClustDB:   PRK00260
- BioCyc:   CBLO291272:BPEN_312-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00041_B
- InterPro:   IPR015803
- InterPro:   IPR015273
- InterPro:   IPR014729
- InterPro:   IPR009080
- Gene3D:   G3DSA:3.40.50.620
- PANTHER:   PTHR10890
- PRINTS:   PR00983
- SMART:   SM00840
- TIGRFAMs:   TIGR00435

Pfam domain/function: PF09190 DALR_2; PF01406 tRNA-synt_1e; SSF47323 tRNAsyn_1a_bind

EC number: =6.1.1.16

Molecular weight: Translated: 54840; Mature: 54840

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: BINDING 273-273

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MLKIFNTLTKKKEKFIPINAGKIKIYVCGVTVYDLCHLGHARTFIVFDSVIRYLRHCGYQ
CCCHHHHHHHHHHCEEEECCCEEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCE
VSYVRNITDIDDKIIKRAYENNETTQQLTNRMIQEMHLDLDALNILRPNYEPKVTEHIDI
EEEHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHH
IIKFICLLISKKHAYTAPNGDIMFSVETMHNYGVLSNKENPPKIHDNILKIPNIKKNPMD
HHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHCCEECCCCCCCCCC
FVLWKKTTYNNKLGEPCWSSPWGLGRPGWHIECSAMNYSIFGNQIDIHGGGSDLIFPHHD
EEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCEEEEECCCCCEEECCCC
NEIAQSVCAHETSYANIWMHSGLLLLNYEKMSKSLNNFFTIRDILKHYDPETIRFFLMSA
CHHHHHHHHCCCCHHEEHEECCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
HYRSQLKYNDNNLKNAQTSLKRLYIALRDTNPTIQPNGGDNEGEYFISKFISKMNDDFNT
HHHHHCEECCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
PEAYSVLFDIAHRLNNLKIKGHSLLAQGMAATLKYLANIIGLLHQNPEIFLKKITLKHNK
CHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEHHCCC
NRHFEKIQKLIQCREVARKNNQWELADSIRKKLTVMGITLEDGPTGITKWHFK
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCEEEEEEEECCCCCCCEEECCC
>Mature Secondary Structure
MLKIFNTLTKKKEKFIPINAGKIKIYVCGVTVYDLCHLGHARTFIVFDSVIRYLRHCGYQ
CCCHHHHHHHHHHCEEEECCCEEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCE
VSYVRNITDIDDKIIKRAYENNETTQQLTNRMIQEMHLDLDALNILRPNYEPKVTEHIDI
EEEHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHH
IIKFICLLISKKHAYTAPNGDIMFSVETMHNYGVLSNKENPPKIHDNILKIPNIKKNPMD
HHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHCCEECCCCCCCCCC
FVLWKKTTYNNKLGEPCWSSPWGLGRPGWHIECSAMNYSIFGNQIDIHGGGSDLIFPHHD
EEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCEEEEECCCCCEEECCCC
NEIAQSVCAHETSYANIWMHSGLLLLNYEKMSKSLNNFFTIRDILKHYDPETIRFFLMSA
CHHHHHHHHCCCCHHEEHEECCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
HYRSQLKYNDNNLKNAQTSLKRLYIALRDTNPTIQPNGGDNEGEYFISKFISKMNDDFNT
HHHHHCEECCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
PEAYSVLFDIAHRLNNLKIKGHSLLAQGMAATLKYLANIIGLLHQNPEIFLKKITLKHNK
CHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEHHCCC
NRHFEKIQKLIQCREVARKNNQWELADSIRKKLTVMGITLEDGPTGITKWHFK
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCEEEEEEEECCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA