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The map label for this gene is ytfF [H]

Identifier: 71892088

GI number: 71892088

Start: 372689

End: 373630

Strand: Direct

Name: ytfF [H]

Synonym: BPEN_315

Alternate gene names: 71892088

Gene position: 372689-373630 (Clockwise)

Preceding gene: 71892086

Following gene: 71892400

Centisome position: 47.08

GC content: 33.44

Gene sequence:

>942_bases
ATGATATTAGGAATTGCTTTTGCTGTAATCTCAGGATTATTATGGGGATTGATTTTTATAGGTCCTTTATTAATACCAGA
ATACCCCAGCATATTACAAGCATCGGGTCGTTATATTGCGTTTGGATTAATTTCATTACCACTATCATGGTGTGATAGAG
CGCGTTTACGCAAATTATTATTAAAAGATTGGTTAGAAGCAATAAAATTAGTTTTAACAGGTCATATAGTATATTATACT
TGTTTAACAAGCGCTATTCAACGCATCGGTGTTCCAATTTCAACTGCTATTATCGGTACATTACCTCTAATGTTAACTGT
AACAACACATATCATTTCTCCTAATGAACAAAAATTACCAAACCATACTTTACTAATATCATTGTTTTTAATGGGAACGG
GATTATTATGTGTAAATATTTCTGAATTGCGAGCTGAGTTCTTTATACTTAATATATGGCAATATGTAAGCGGAATAATT
TTGGCAATTGTTTCTGTTTTATGTTGGGCATGGTATGCATTAAGAAATGCACATTGGTTAAAAACACATCCACACAATAA
GCCCATGACTTGGGCTAATGCACAAGGCATGGTTACGTTACCACTATCGTGTCTCGTTTATTTTTTTGTATGTATCTGGT
GTTCGGATCTGATCCAAGATGAATTTGCATTACCCTTCGGGCCTAGACCGATTTTTTTTATTTTTTTGATGGTATTAATT
GGATTCTGTTGTTCTTGGTTAGGGACATTCTTTTGGAATGAAGCTAGCCAAAGATTACCGACAACATTAATAGGACCATT
AATTGTGGTAGAAACTGTAGCAGGTTTAATATATTCATGCATACATCAACAATTATGGCCATCTCCCTTAATTTTAATTG
GAATGTTCTTACTAATTTCTGGAGTTACATGTATCATGCAAATTCGTAAGAACACACACTAA

Upstream 100 bases:

>100_bases
AAAATGTGTATACTTGATAATATATGCTTTTGATTTAATAAAAATAGATTTTTAATAAATAATAGTATCAAGCATATTTC
ATTAGTATAGTAAAAATATC

Downstream 100 bases:

>100_bases
AATAATTTTTTAAAAATTATTGATCTTTAAATAAATAATTAGAAGAATTTTGTTAAAACAGAGCATGTCATTTTAATTTA
CAACAAATAAAACTCATGTA

Product: putative cationic amino acid transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MILGIAFAVISGLLWGLIFIGPLLIPEYPSILQASGRYIAFGLISLPLSWCDRARLRKLLLKDWLEAIKLVLTGHIVYYT
CLTSAIQRIGVPISTAIIGTLPLMLTVTTHIISPNEQKLPNHTLLISLFLMGTGLLCVNISELRAEFFILNIWQYVSGII
LAIVSVLCWAWYALRNAHWLKTHPHNKPMTWANAQGMVTLPLSCLVYFFVCIWCSDLIQDEFALPFGPRPIFFIFLMVLI
GFCCSWLGTFFWNEASQRLPTTLIGPLIVVETVAGLIYSCIHQQLWPSPLILIGMFLLISGVTCIMQIRKNTH

Sequences:

>Translated_313_residues
MILGIAFAVISGLLWGLIFIGPLLIPEYPSILQASGRYIAFGLISLPLSWCDRARLRKLLLKDWLEAIKLVLTGHIVYYT
CLTSAIQRIGVPISTAIIGTLPLMLTVTTHIISPNEQKLPNHTLLISLFLMGTGLLCVNISELRAEFFILNIWQYVSGII
LAIVSVLCWAWYALRNAHWLKTHPHNKPMTWANAQGMVTLPLSCLVYFFVCIWCSDLIQDEFALPFGPRPIFFIFLMVLI
GFCCSWLGTFFWNEASQRLPTTLIGPLIVVETVAGLIYSCIHQQLWPSPLILIGMFLLISGVTCIMQIRKNTH
>Mature_313_residues
MILGIAFAVISGLLWGLIFIGPLLIPEYPSILQASGRYIAFGLISLPLSWCDRARLRKLLLKDWLEAIKLVLTGHIVYYT
CLTSAIQRIGVPISTAIIGTLPLMLTVTTHIISPNEQKLPNHTLLISLFLMGTGLLCVNISELRAEFFILNIWQYVSGII
LAIVSVLCWAWYALRNAHWLKTHPHNKPMTWANAQGMVTLPLSCLVYFFVCIWCSDLIQDEFALPFGPRPIFFIFLMVLI
GFCCSWLGTFFWNEASQRLPTTLIGPLIVVETVAGLIYSCIHQQLWPSPLILIGMFLLISGVTCIMQIRKNTH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI226510990, Length=313, Percent_Identity=50.1597444089457, Blast_Score=314, Evalue=5e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 35216; Mature: 35216

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILGIAFAVISGLLWGLIFIGPLLIPEYPSILQASGRYIAFGLISLPLSWCDRARLRKLL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHH
LKDWLEAIKLVLTGHIVYYTCLTSAIQRIGVPISTAIIGTLPLMLTVTTHIISPNEQKLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NHTLLISLFLMGTGLLCVNISELRAEFFILNIWQYVSGIILAIVSVLCWAWYALRNAHWL
CHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
KTHPHNKPMTWANAQGMVTLPLSCLVYFFVCIWCSDLIQDEFALPFGPRPIFFIFLMVLI
CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
GFCCSWLGTFFWNEASQRLPTTLIGPLIVVETVAGLIYSCIHQQLWPSPLILIGMFLLIS
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
GVTCIMQIRKNTH
HHHHHHHHHHCCC
>Mature Secondary Structure
MILGIAFAVISGLLWGLIFIGPLLIPEYPSILQASGRYIAFGLISLPLSWCDRARLRKLL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHH
LKDWLEAIKLVLTGHIVYYTCLTSAIQRIGVPISTAIIGTLPLMLTVTTHIISPNEQKLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NHTLLISLFLMGTGLLCVNISELRAEFFILNIWQYVSGIILAIVSVLCWAWYALRNAHWL
CHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
KTHPHNKPMTWANAQGMVTLPLSCLVYFFVCIWCSDLIQDEFALPFGPRPIFFIFLMVLI
CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
GFCCSWLGTFFWNEASQRLPTTLIGPLIVVETVAGLIYSCIHQQLWPSPLILIGMFLLIS
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
GVTCIMQIRKNTH
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]