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The map label for this gene is atpC

Identifier: 71891802

GI number: 71891802

Start: 8728

End: 9162

Strand: Direct

Name: atpC

Synonym: BPEN_009

Alternate gene names: 71891802

Gene position: 8728-9162 (Clockwise)

Preceding gene: 71891801

Following gene: 71891803

Centisome position: 1.1

GC content: 31.26

Gene sequence:

>435_bases
ATGTCTGAATGTACTTATTACTTAACTGTTGTTTCTGTTGAAAGAGAAATATTCTCTGGCGTAGTTCGTAAAATTCAAGT
AACAGGTATTGAAGGTGAAATGGGTGTTTTTCCAGGTCATACTCCGTTACTTACGTCGATTAAGCCAGGAGTATTGCGTA
TAGTAAAATCACATGATAATGAAGAATATATATATATATCTGGAGGTATACTTGAGGTTCAAAGAAATATAGTGACGATA
TTGGCGGATACAGCCATCCGAGCGGAAGAATTAGATGAAAAAAAAGCCAAAGAAGCTAAACATGAAGCTGAAAAACATAT
TAAGAATTATCGCCATAGCTCTGATATAGATTATATTAAAATAACTTCAGATATATCTAAAGCTATTGCAAAACTTAGAT
TAATGGAATTAACTAAAAAAAATAAGTATATGTAA

Upstream 100 bases:

>100_bases
GAGCAAGCATTTTATATGGTAGGCACTATAGAAGAGGTTATAAAAAAAAATAAAACGCTTTAAATTTTTTATTTTATTGA
TAAAAGGTCTGGATATCAGA

Downstream 100 bases:

>100_bases
CTAGTAATAATATTTCTATTTGTTGTATAAATAATTTTTCTGTTTATGTATATGTAGTTATATGTTTAATGTAATAAAAA
TAGTTTATAACCAAAAATAA

Product: ATP synthase, F1 sector, epsilon-subunit

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSECTYYLTVVSVEREIFSGVVRKIQVTGIEGEMGVFPGHTPLLTSIKPGVLRIVKSHDNEEYIYISGGILEVQRNIVTI
LADTAIRAEELDEKKAKEAKHEAEKHIKNYRHSSDIDYIKITSDISKAIAKLRLMELTKKNKYM

Sequences:

>Translated_144_residues
MSECTYYLTVVSVEREIFSGVVRKIQVTGIEGEMGVFPGHTPLLTSIKPGVLRIVKSHDNEEYIYISGGILEVQRNIVTI
LADTAIRAEELDEKKAKEAKHEAEKHIKNYRHSSDIDYIKITSDISKAIAKLRLMELTKKNKYM
>Mature_143_residues
SECTYYLTVVSVEREIFSGVVRKIQVTGIEGEMGVFPGHTPLLTSIKPGVLRIVKSHDNEEYIYISGGILEVQRNIVTIL
ADTAIRAEELDEKKAKEAKHEAEKHIKNYRHSSDIDYIKITSDISKAIAKLRLMELTKKNKYM

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=136, Percent_Identity=61.0294117647059, Blast_Score=179, Evalue=7e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_BLOPB (Q494C2)

Other databases:

- EMBL:   CP000016
- RefSeq:   YP_277531.1
- ProteinModelPortal:   Q494C2
- SMR:   Q494C2
- STRING:   Q494C2
- GeneID:   3562624
- GenomeReviews:   CP000016_GR
- KEGG:   bpn:BPEN_009
- eggNOG:   COG0355
- HOGENOM:   HBG663981
- OMA:   SAEASIF
- BioCyc:   CBLO291272:BPEN_009-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- Gene3D:   G3DSA:1.20.5.440
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N; SSF46604 ATPsynt_DE; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 16367; Mature: 16236

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSECTYYLTVVSVEREIFSGVVRKIQVTGIEGEMGVFPGHTPLLTSIKPGVLRIVKSHDN
CCCCEEEEEEEHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHCCCHHHHHHHHCCCC
EEYIYISGGILEVQRNIVTILADTAIRAEELDEKKAKEAKHEAEKHIKNYRHSSDIDYIK
CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
ITSDISKAIAKLRLMELTKKNKYM
EHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SECTYYLTVVSVEREIFSGVVRKIQVTGIEGEMGVFPGHTPLLTSIKPGVLRIVKSHDN
CCCEEEEEEEHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHCCCHHHHHHHHCCCC
EEYIYISGGILEVQRNIVTILADTAIRAEELDEKKAKEAKHEAEKHIKNYRHSSDIDYIK
CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
ITSDISKAIAKLRLMELTKKNKYM
EHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA