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The map label for this gene is atpD

Identifier: 71891801

GI number: 71891801

Start: 7302

End: 8690

Strand: Direct

Name: atpD

Synonym: BPEN_008

Alternate gene names: 71891801

Gene position: 7302-8690 (Clockwise)

Preceding gene: 71891800

Following gene: 71891802

Centisome position: 0.92

GC content: 34.85

Gene sequence:

>1389_bases
ATGAGTTCTGGAAAAATTGTCCAGGTTATTGGAGCGGTGGTTGATGTTGCGTTCAATCAAGATGTGGTACCGACTGTATA
CCATGCACTTGAGGTGCATATTGATAGTTTTAATAAAAAGTTAATATTAGAAGTAGCGCAACAATTAGGTGGAGGTATAG
TACGTTGCATTGCAATGGGTAATACTGATGGATTACGTCGTGGGTTAGTAGTAATTAATTTAAAACACTCTATTGAAGTT
CCGGTAGGAAAAGAAACTTTAGGTCGTGTAATGAATGTATTAGGTGAACCAATTGATATGAAAGGACCAATTAAAGAAAA
AGAAAAGTGGTCTATTCATAGATCTGCTCCACTTTATTCCGAATTATCTACTGACCAAGATCTTTTAGTGACTGGTATTA
AAGTAATTGATTTAATGTGCCCGTTCTCTAAAGGAGGAAAAATAGGTCTTTTTGGAGGAGCAGGAGTTGGAAAGACCGTA
AATATGATGGAACTTATTCGTAATATTGCCGTAGAACATTCTGGTTACTCAGTGTTTGTTGGTGTTGGGGAGCGCACTCG
TGAAGGTAATGATTTTTATAACGAAATGATAAACTCTGATGTTATTAATAAAGTTGCTTTAGTATATGGTCAAATGAATG
AACCGCCTGGAAATAGATTACGTGTGGCTTTGACTGGTCTTACTATGGCGGAAAAATTTAGAGATGAAGGACATGATGTA
TTGTTATTTATAGATAATATATATCGTTATACTCTTGCTGGTACTGAAGTTTCTGCATTATTGGGACGTATTCCATCGGC
GGTAGGCTATCAATCTACATTGTCAGAAGAAATGGGTATTTTACAAGAACGTATTACTTCTACAAGTTTAGGATCAATTA
CTTCTGTGCAAGCAGTGTATGTTCCTGCAGACGATCTTACAGATCCATCTCCTGCTACTACTTTTTCGCATTTAGATGCA
ACTATAGTTTTAAGTCGTCAAATTGCTGCTCTTGGTATCTATCCTTCGGTAGATCCATTAGATTCTAATAGTCAACAATT
AAATCCGCTGATTGTAGGGCAAGAACATTACAATGTGGCTCGTGATGTAAAGTCTATCCTTCAACGTTATCAAGAGCTTA
AAGATATTATTGCGATTTTAGGTATGGATGAATTATCAGAAGAAGATAAATTAATAGTATTACGTTCGAGAAAAATTCAA
CGGTTTTTATCACAACCTTTTTTTGTTGCTGAAGTATTTACTGGATTCTCTGGTGTATATGTTTCTTTAAGAGATACTAT
TCAAGGATTTAAAGAAATCATAGAAGGAAAATATGATCATATTCCAGAGCAAGCATTTTATATGGTAGGCACTATAGAAG
AGGTTATAAAAAAAAATAAAACGCTTTAA

Upstream 100 bases:

>100_bases
TAATAAAGCTAGACAAACTAAAATTACAGAAGAACTTACAGAAATTGTTTCAGGAGCTTCTGTAATATAAACTTAAAAGA
TAGTTAGAGGTATAATTAAT

Downstream 100 bases:

>100_bases
ATTTTTTATTTTATTGATAAAAGGTCTGGATATCAGAATGTCTGAATGTACTTATTACTTAACTGTTGTTTCTGTTGAAA
GAGAAATATTCTCTGGCGTA

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta

Number of amino acids: Translated: 462; Mature: 461

Protein sequence:

>462_residues
MSSGKIVQVIGAVVDVAFNQDVVPTVYHALEVHIDSFNKKLILEVAQQLGGGIVRCIAMGNTDGLRRGLVVINLKHSIEV
PVGKETLGRVMNVLGEPIDMKGPIKEKEKWSIHRSAPLYSELSTDQDLLVTGIKVIDLMCPFSKGGKIGLFGGAGVGKTV
NMMELIRNIAVEHSGYSVFVGVGERTREGNDFYNEMINSDVINKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGHDV
LLFIDNIYRYTLAGTEVSALLGRIPSAVGYQSTLSEEMGILQERITSTSLGSITSVQAVYVPADDLTDPSPATTFSHLDA
TIVLSRQIAALGIYPSVDPLDSNSQQLNPLIVGQEHYNVARDVKSILQRYQELKDIIAILGMDELSEEDKLIVLRSRKIQ
RFLSQPFFVAEVFTGFSGVYVSLRDTIQGFKEIIEGKYDHIPEQAFYMVGTIEEVIKKNKTL

Sequences:

>Translated_462_residues
MSSGKIVQVIGAVVDVAFNQDVVPTVYHALEVHIDSFNKKLILEVAQQLGGGIVRCIAMGNTDGLRRGLVVINLKHSIEV
PVGKETLGRVMNVLGEPIDMKGPIKEKEKWSIHRSAPLYSELSTDQDLLVTGIKVIDLMCPFSKGGKIGLFGGAGVGKTV
NMMELIRNIAVEHSGYSVFVGVGERTREGNDFYNEMINSDVINKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGHDV
LLFIDNIYRYTLAGTEVSALLGRIPSAVGYQSTLSEEMGILQERITSTSLGSITSVQAVYVPADDLTDPSPATTFSHLDA
TIVLSRQIAALGIYPSVDPLDSNSQQLNPLIVGQEHYNVARDVKSILQRYQELKDIIAILGMDELSEEDKLIVLRSRKIQ
RFLSQPFFVAEVFTGFSGVYVSLRDTIQGFKEIIEGKYDHIPEQAFYMVGTIEEVIKKNKTL
>Mature_461_residues
SSGKIVQVIGAVVDVAFNQDVVPTVYHALEVHIDSFNKKLILEVAQQLGGGIVRCIAMGNTDGLRRGLVVINLKHSIEVP
VGKETLGRVMNVLGEPIDMKGPIKEKEKWSIHRSAPLYSELSTDQDLLVTGIKVIDLMCPFSKGGKIGLFGGAGVGKTVN
MMELIRNIAVEHSGYSVFVGVGERTREGNDFYNEMINSDVINKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGHDVL
LFIDNIYRYTLAGTEVSALLGRIPSAVGYQSTLSEEMGILQERITSTSLGSITSVQAVYVPADDLTDPSPATTFSHLDAT
IVLSRQIAALGIYPSVDPLDSNSQQLNPLIVGQEHYNVARDVKSILQRYQELKDIIAILGMDELSEEDKLIVLRSRKIQR
FLSQPFFVAEVFTGFSGVYVSLRDTIQGFKEIIEGKYDHIPEQAFYMVGTIEEVIKKNKTL

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family

Homologues:

Organism=Homo sapiens, GI32189394, Length=468, Percent_Identity=67.7350427350427, Blast_Score=632, Evalue=0.0,
Organism=Homo sapiens, GI19913424, Length=331, Percent_Identity=28.7009063444109, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI50345984, Length=296, Percent_Identity=25.6756756756757, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI4757810, Length=296, Percent_Identity=25.6756756756757, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI19913428, Length=358, Percent_Identity=25.4189944134078, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI19913426, Length=374, Percent_Identity=25.4010695187166, Blast_Score=99, Evalue=6e-21,
Organism=Escherichia coli, GI1790170, Length=462, Percent_Identity=81.1688311688312, Blast_Score=781, Evalue=0.0,
Organism=Escherichia coli, GI1788251, Length=343, Percent_Identity=29.4460641399417, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1790172, Length=302, Percent_Identity=26.4900662251656, Blast_Score=100, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI25144756, Length=468, Percent_Identity=66.025641025641, Blast_Score=613, Evalue=1e-176,
Organism=Caenorhabditis elegans, GI17565854, Length=321, Percent_Identity=28.9719626168224, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI71988080, Length=296, Percent_Identity=25, Blast_Score=101, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI71988063, Length=296, Percent_Identity=25, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17570191, Length=348, Percent_Identity=25, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17510931, Length=342, Percent_Identity=23.9766081871345, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71988074, Length=298, Percent_Identity=24.1610738255034, Blast_Score=81, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6322581, Length=460, Percent_Identity=66.304347826087, Blast_Score=610, Evalue=1e-175,
Organism=Saccharomyces cerevisiae, GI6319603, Length=352, Percent_Identity=25.8522727272727, Blast_Score=100, Evalue=6e-22,
Organism=Saccharomyces cerevisiae, GI6319370, Length=375, Percent_Identity=25.6, Blast_Score=98, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6320016, Length=255, Percent_Identity=26.2745098039216, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24638766, Length=467, Percent_Identity=67.6659528907923, Blast_Score=626, Evalue=1e-180,
Organism=Drosophila melanogaster, GI28574560, Length=466, Percent_Identity=64.5922746781116, Blast_Score=582, Evalue=1e-166,
Organism=Drosophila melanogaster, GI20129479, Length=346, Percent_Identity=27.1676300578035, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24583992, Length=334, Percent_Identity=26.0479041916168, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24583988, Length=350, Percent_Identity=25.4285714285714, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24583986, Length=350, Percent_Identity=25.4285714285714, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24583984, Length=350, Percent_Identity=25.4285714285714, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24658560, Length=296, Percent_Identity=26.0135135135135, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI281361666, Length=351, Percent_Identity=26.4957264957265, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24646341, Length=351, Percent_Identity=26.4957264957265, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI17136796, Length=351, Percent_Identity=26.4957264957265, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24638768, Length=94, Percent_Identity=54.2553191489362, Blast_Score=91, Evalue=1e-18,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): ATPB_BLOPB (Q494C3)

Other databases:

- EMBL:   CP000016
- RefSeq:   YP_277530.1
- ProteinModelPortal:   Q494C3
- SMR:   Q494C3
- STRING:   Q494C3
- GeneID:   3562623
- GenomeReviews:   CP000016_GR
- KEGG:   bpn:BPEN_008
- eggNOG:   COG0055
- HOGENOM:   HBG565875
- OMA:   IGQEHYD
- ProtClustDB:   PRK09280
- BioCyc:   CBLO291272:BPEN_008-MONOMER
- HAMAP:   MF_01347
- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100
- PANTHER:   PTHR15184:SF8
- SMART:   SM00382
- TIGRFAMs:   TIGR01039

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N; SSF47917 ATPase_a/b_C; SSF50615 ATPase_a/b_N

EC number: =3.6.3.14

Molecular weight: Translated: 50850; Mature: 50719

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGKIVQVIGAVVDVAFNQDVVPTVYHALEVHIDSFNKKLILEVAQQLGGGIVRCIAMG
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEEC
NTDGLRRGLVVINLKHSIEVPVGKETLGRVMNVLGEPIDMKGPIKEKEKWSIHRSAPLYS
CCCCHHCCEEEEEECCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCHH
ELSTDQDLLVTGIKVIDLMCPFSKGGKIGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFV
HHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEE
GVGERTREGNDFYNEMINSDVINKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGHDV
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHCCCCEE
LLFIDNIYRYTLAGTEVSALLGRIPSAVGYQSTLSEEMGILQERITSTSLGSITSVQAVY
EEEEECHHHEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
VPADDLTDPSPATTFSHLDATIVLSRQIAALGIYPSVDPLDSNSQQLNPLIVGQEHYNVA
ECCCCCCCCCCCCHHHHCCEEEEEEHHHHHEECCCCCCCCCCCCCCCCCEEECCHHHHHH
RDVKSILQRYQELKDIIAILGMDELSEEDKLIVLRSRKIQRFLSQPFFVAEVFTGFSGVY
HHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEEHHHHHHHHHCCCHHHHHHHCCCCCEE
VSLRDTIQGFKEIIEGKYDHIPEQAFYMVGTIEEVIKKNKTL
EEHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSGKIVQVIGAVVDVAFNQDVVPTVYHALEVHIDSFNKKLILEVAQQLGGGIVRCIAMG
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEEC
NTDGLRRGLVVINLKHSIEVPVGKETLGRVMNVLGEPIDMKGPIKEKEKWSIHRSAPLYS
CCCCHHCCEEEEEECCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCHH
ELSTDQDLLVTGIKVIDLMCPFSKGGKIGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFV
HHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEE
GVGERTREGNDFYNEMINSDVINKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGHDV
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHCCCCEE
LLFIDNIYRYTLAGTEVSALLGRIPSAVGYQSTLSEEMGILQERITSTSLGSITSVQAVY
EEEEECHHHEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
VPADDLTDPSPATTFSHLDATIVLSRQIAALGIYPSVDPLDSNSQQLNPLIVGQEHYNVA
ECCCCCCCCCCCCHHHHCCEEEEEEHHHHHEECCCCCCCCCCCCCCCCCEEECCHHHHHH
RDVKSILQRYQELKDIIAILGMDELSEEDKLIVLRSRKIQRFLSQPFFVAEVFTGFSGVY
HHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEEHHHHHHHHHCCCHHHHHHHCCCCCEE
VSLRDTIQGFKEIIEGKYDHIPEQAFYMVGTIEEVIKKNKTL
EEHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA