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The map label for this gene is holA

Identifier: 68535645

GI number: 68535645

Start: 693565

End: 694548

Strand: Direct

Name: holA

Synonym: jk0573

Alternate gene names: NA

Gene position: 693565-694548 (Clockwise)

Preceding gene: 68535644

Following gene: 68535649

Centisome position: 28.17

GC content: 64.84

Gene sequence:

>984_bases
ATGAACCGCCCCGAGCATCCCGCACCCATCAACCTGATCGTCGGCGGCGATGACTTCCTGGCTGAACGGCGTAGGCAGGG
CATCGTCAACCAGGCGCGGGCCGCCAGTGGGGACCCGAACTTGCCGGTAGAGATGCGCAAAGCCTCGGAACTCAGTGCCC
CCGAATTGGCTGAGCTGCTAAGCCCCAGCCTGTTCGCCGAAGACCGGATCGTGGTCGTCACAGGCGTGGAAGATACAGGC
AAGGAGATCGTCGGGCTGCTGGAACAGGCGATCAAGGACCCGGCCGACGGGGTGGTGCTGATCATCGTGCACACCGGCAA
AGGGCGCAATAAAAAGCTGGTGGATAGCTGGCCGAAACTCGGCGCGGTGGTATTCCAAGCCGGTGCACTTAAAGGCCGCG
AGCAGTTGGCCTTCATCGACCAGGAGTTTCGCAGCCAGGGCGCGCGGGTAACCCGTGAAGTGTGCGAGCTGCTGCTGGAC
GTGGTGGGAAGCGATCTGCGCCAGCTGGCTAGTGCCATCAGCCAACTCATCGCCGACACGGACGGCCACGTGGACGCCGC
GGCGGTGAAGCGTTACTACCAGGGCAAGGCGGAGGTCAGCGGTTTCGAGGTCGCTGACTACGCCATCGCGGGTAACGTCC
GCGCCGCAGTAGCATTAGCGCGCCGGGCGCTACAGCTCGGCGTGGCGCCGGTGCTGTTGGCCAGCGCACTGAGCTCCGGG
ATCGCGGACATTGCGAAGGTGGCGGGCGCGGGCAACATCAACTCCCGCCGAGATGCGGCGAAGTTCGGAATGGCACCGTG
GAAGCTGGACAAAACGATCCGCACCGCCCGGCGTTGGACCACGCCCATGATTGCGCAGGCGGTGCAGATCACCGCAGAGC
TTGATGCGGGTGTGAAGGGACACAGCGCCGACCCCGACTTCGCAGTAGAGGACGCGGTGCGGAAAATTGCGCACGTCGCT
GGCGGGCAGCCAGCGCGTAGATAG

Upstream 100 bases:

>100_bases
CCCAGCTTTATGCCCAACGGGGTGCCCGTGTACTACCCGTGCAAGGACAAGGTGGAGTTCCGTTAGAAGTGTCGTGCACA
GATCTGGCAAGATCGAACCC

Downstream 100 bases:

>100_bases
TGCAGTGCTGGCGGACAGCCAGCGCGCAGATAATGCAGCGCTAGCGGGCGCTAAAGCCTTTCCACACGCCGCAGTGCACT
GCATCGTCGTAGCGCGACTC

Product: DNA polymerase III, delta subunit

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Subunit Delta; DNA Polymerase III; DNA Polymerase III Delta; DNA Polymerase III Delta Subunit HolA; DNA Polymerase III Subunit Delta-Like Protein; LOW QUALITY PROTEIN DNA Polymerase III Delta Subunit

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MNRPEHPAPINLIVGGDDFLAERRRQGIVNQARAASGDPNLPVEMRKASELSAPELAELLSPSLFAEDRIVVVTGVEDTG
KEIVGLLEQAIKDPADGVVLIIVHTGKGRNKKLVDSWPKLGAVVFQAGALKGREQLAFIDQEFRSQGARVTREVCELLLD
VVGSDLRQLASAISQLIADTDGHVDAAAVKRYYQGKAEVSGFEVADYAIAGNVRAAVALARRALQLGVAPVLLASALSSG
IADIAKVAGAGNINSRRDAAKFGMAPWKLDKTIRTARRWTTPMIAQAVQITAELDAGVKGHSADPDFAVEDAVRKIAHVA
GGQPARR

Sequences:

>Translated_327_residues
MNRPEHPAPINLIVGGDDFLAERRRQGIVNQARAASGDPNLPVEMRKASELSAPELAELLSPSLFAEDRIVVVTGVEDTG
KEIVGLLEQAIKDPADGVVLIIVHTGKGRNKKLVDSWPKLGAVVFQAGALKGREQLAFIDQEFRSQGARVTREVCELLLD
VVGSDLRQLASAISQLIADTDGHVDAAAVKRYYQGKAEVSGFEVADYAIAGNVRAAVALARRALQLGVAPVLLASALSSG
IADIAKVAGAGNINSRRDAAKFGMAPWKLDKTIRTARRWTTPMIAQAVQITAELDAGVKGHSADPDFAVEDAVRKIAHVA
GGQPARR
>Mature_327_residues
MNRPEHPAPINLIVGGDDFLAERRRQGIVNQARAASGDPNLPVEMRKASELSAPELAELLSPSLFAEDRIVVVTGVEDTG
KEIVGLLEQAIKDPADGVVLIIVHTGKGRNKKLVDSWPKLGAVVFQAGALKGREQLAFIDQEFRSQGARVTREVCELLLD
VVGSDLRQLASAISQLIADTDGHVDAAAVKRYYQGKAEVSGFEVADYAIAGNVRAAVALARRALQLGVAPVLLASALSSG
IADIAKVAGAGNINSRRDAAKFGMAPWKLDKTIRTARRWTTPMIAQAVQITAELDAGVKGHSADPDFAVEDAVRKIAHVA
GGQPARR

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 34737; Mature: 34737

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRPEHPAPINLIVGGDDFLAERRRQGIVNQARAASGDPNLPVEMRKASELSAPELAELL
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHH
SPSLFAEDRIVVVTGVEDTGKEIVGLLEQAIKDPADGVVLIIVHTGKGRNKKLVDSWPKL
CCHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHH
GAVVFQAGALKGREQLAFIDQEFRSQGARVTREVCELLLDVVGSDLRQLASAISQLIADT
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DGHVDAAAVKRYYQGKAEVSGFEVADYAIAGNVRAAVALARRALQLGVAPVLLASALSSG
CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IADIAKVAGAGNINSRRDAAKFGMAPWKLDKTIRTARRWTTPMIAQAVQITAELDAGVKG
HHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
HSADPDFAVEDAVRKIAHVAGGQPARR
CCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNRPEHPAPINLIVGGDDFLAERRRQGIVNQARAASGDPNLPVEMRKASELSAPELAELL
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHH
SPSLFAEDRIVVVTGVEDTGKEIVGLLEQAIKDPADGVVLIIVHTGKGRNKKLVDSWPKL
CCHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHH
GAVVFQAGALKGREQLAFIDQEFRSQGARVTREVCELLLDVVGSDLRQLASAISQLIADT
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DGHVDAAAVKRYYQGKAEVSGFEVADYAIAGNVRAAVALARRALQLGVAPVLLASALSSG
CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IADIAKVAGAGNINSRRDAAKFGMAPWKLDKTIRTARRWTTPMIAQAVQITAELDAGVKG
HHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
HSADPDFAVEDAVRKIAHVAGGQPARR
CCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA